XLOC_006419


Basic Information

Item Value
gene id XLOC_006419
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 7154322 ~ 7154837 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013462
aaacagtgacaaaattccaTTTAGAAGAGATGAACCTGATATAAACATAAAGGTCTTTATATAATAGGCTATATAATAGGCTTTAAAAGtccagtgaagtgctttgaaattagcattttttaatttgatgtttgaCAATCTAAACTGTACCAAGTAgggagggtgggacatagagtagctcctctcCTTTTAATAAAACAGCCAACATCTTTCCATTTATCACATCTCTGTCAAGtagtcagaacacaaacgagtagcaggtaatgaagtattaagcattctTCTAAACAAAAACTTGTCTGAGCAAAATGCTAGCTCCGCCTTTTTGCCCTTATTTGGTTGGAGCGatgacacacaaacaaaatgactctggttggccacgcccacttgtagcttcatttgtgcCCTTCAGAAACCTTagggcaggcatgtccaaactcggttctgaaaggccgatgtcctgcaaagtttagttccaaccctaatcagacacacctgggctagctaatcaagctc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013462 True 516 lncRNA 0.40 1 7154322 7154837

Neighbor

gene id symbol gene type direction distance location
XLOC_006418 CABZ01061524.1 coding downstream 123289 6960782 ~ 7031033 (-)
XLOC_006417 NA coding downstream 815664 6335364 ~ 6338658 (-)
XLOC_006416 mcph1 coding downstream 830311 6286594 ~ 6324011 (-)
XLOC_006415 agpat5 coding downstream 874638 6259392 ~ 6279684 (-)
XLOC_006414 tuba4l coding downstream 901808 6245219 ~ 6252514 (-)
XLOC_006420 ninl coding upstream 16229 7171066 ~ 7233811 (-)
XLOC_006421 NA coding upstream 114375 7269212 ~ 7322676 (-)
XLOC_006422 NA coding upstream 150578 7305415 ~ 7316939 (-)
XLOC_006423 si:dkey-45k15.1 coding upstream 214157 7368994 ~ 7432715 (-)
XLOC_006424 si:dkey-196h17.9 coding upstream 307878 7462715 ~ 7474324 (-)
XLOC_006338 rn7sk misc downstream 6328097 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 3109904 10264741 ~ 10264905 (-)
XLOC_006411 NA non-coding downstream 966578 6150221 ~ 6187744 (-)
XLOC_006412 CU984583.1 non-coding downstream 992758 6160581 ~ 6161564 (-)
XLOC_006406 NA non-coding downstream 1421825 5730915 ~ 5732497 (-)
XLOC_006405 CR926469.1 non-coding downstream 1529907 5579097 ~ 5624415 (-)
XLOC_006426 NA non-coding upstream 592274 7747111 ~ 7749201 (-)
XLOC_006428 NA non-coding upstream 1013876 8168713 ~ 8230165 (-)
XLOC_006434 BX004962.1 non-coding upstream 1494874 8649711 ~ 8650051 (-)

Expression


Co-expression Network