CI01000001_03618075_03620436


Basic Information

Item Value
gene id CI01000001_03618075_03620436
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3618075 ~ 3621451 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_03618075_03620436.mRNA
GTGTCCGTTTCAGTACAAGTATGACTTTCACCATGACTAGCATTGCACCTAATGTTTTTGCTTGTTTCACAGTATCAGATGTCACACCAACTACTACAGCTCCACAGCAAACAGACCCGGCTGTCATAGGAGTGGTAATTGCCCTGATCCTGGTGACCCTTGCCCTCTGTGGATTCCTGTTGTACCGATACCTGTGCCACAGCAAGGGTGTTTACAGAACCGCAGGTGAGCCTGCACCAGGAGTGGACCCAGAACAGGTCTACAATGACACCACCGTCACTGACAATAAGAAGGAATACTTCATCTGAACTGCTTAGCATCAGAGGGATTCAACCAATGATCTGCCTAAAATTGCATGGACTGCTCCAGACATCTAAATAGCCTATATAGAGAGTTTTATATGCAAGACATATGGGACATGAGCCACTAGTCTGTGCTGTGGAGAAGAATGTTTAGTTGAAGGGATACCGTTTGAGCCAGAAGTAAAAGGAGTTGTTCGTTCATGATGTCAATAACCTCAACATCGATTTTGGTATGGTAAAGTTATTGTCAGTTACTGGGACAATCTTTTTTTTTTTTGCTGTCAAATTGTTATGCCTGTATATAGTTTATATATCCAAACTGTATATTCGCTACTTCAGCAGAAATTACACAAAAGTGCATATGCAAGAGTTAGAATTTGAATTATTGATCAGTAATTATTACGAGTTATTATCAGCTATTATTAGAACTCTAACAATTGCCAAACATTGGAGGCACTGTACAAATTTGATTTTGAGTCATAAGTCACTTTAATGTTCATGTGTGGCCTTTTTCCTGTTAACCATTTGGCCTGACTTTTTATTATTTATTAATGGCAGCATTTTTAGTAGAATAGTTGGAGAGCCCACTGTTACCTTGTAAAACATTTAAATATATTTTACAAATTTTTTTTTTTTTTTGAAATTGACACGTTTTATAATTCAAGATTGTGTTTTTGTTACATAGCCATGCTGTAACAGTGCCAAATTATATATATATATTACCTCTGTCATTATTTGTAAAACATGCATGTGATACTGTATATTTTTTGTTTTGTGCAGGGTTACAATAGTATCTTACTTAAGAAAATGAATGTAATTTATATCACATTCTGAGTCATCTTTTTTTCATTGCACTATCAATATGTTGCTGTGGTTATTGATGATAATACCATGTCAAATACAAGTGGCTAGTTAGTTCAAATTTGCTTGTACAACTAAAATGAAGATTATTTATATACATGAAATCAATTTCTGTGCAACTATTTTTGTTGTAATCTGGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_03618075_03620436.mRNA False 1304 mRNA 0.35 3 3618075 3621432

Neighbor

gene id symbol gene type direction distance location
CI01000001_03609191_03615121 NA coding upstream 2659 3609191 ~ 3615416 (+)
CI01000001_03593892_03602210 RACGAP1 coding upstream 15815 3593892 ~ 3602260 (+)
CI01000001_03506220_03510588 COQ10A coding upstream 107415 3506220 ~ 3510660 (+)
CI01000001_03482362_03485979 TMED4.S, TMED4 coding upstream 130822 3482362 ~ 3487253 (+)
CI01000001_03306094_03325686 NA coding upstream 290526 3305894 ~ 3327549 (+)
CI01000001_03638240_03647295 POU6F1 coding downstream 16808 3638240 ~ 3647680 (+)
CI01000001_03650790_03662852 LSF, TFCP2, TFCP2.L coding downstream 29204 3650636 ~ 3662944 (+)
CI01000001_03669438_03673748 CSRNP2 coding downstream 47293 3668725 ~ 3673787 (+)
CI01000001_03719251_03775929 ITGA5 coding downstream 96758 3718190 ~ 3776425 (+)
CI01000001_03821989_03823336 SLC48A1A coding downstream 200557 3821989 ~ 3823584 (+)
G14856 NA non-coding upstream 34033 3583116 ~ 3584042 (+)
G14836 NA non-coding upstream 67917 3548776 ~ 3550158 (+)
G14741 NA non-coding upstream 82852 3531198 ~ 3535223 (+)
G14733 NA non-coding upstream 87365 3516800 ~ 3530710 (+)
G14743 NA non-coding upstream 138218 3476585 ~ 3479857 (+)
G14842 NA non-coding downstream 146 3621578 ~ 3624630 (+)
G14873 NA non-coding downstream 11661 3633093 ~ 3633583 (+)
G14874 NA non-coding downstream 15423 3636855 ~ 3695392 (+)
G14878 NA non-coding downstream 61890 3683322 ~ 3684468 (+)
G14911 NA non-coding downstream 219711 3841143 ~ 3841354 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 1947071 1667762 ~ 1671167 (+)
G13051 NA other upstream 2572923 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3126018 483853 ~ 488825 (+)
G12614 NA other upstream 3307134 309144 ~ 310941 (+)
G15794 NA other downstream 1439786 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1665317 5279837 ~ 5287698 (+)
G15995 NA other downstream 2090453 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3911140 7531541 ~ 7540586 (+)
G17234 NA other downstream 4410692 8032124 ~ 8032483 (+)

Expression


Co-expression Network