XLOC_006784


Basic Information

Item Value
gene id XLOC_006784
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 35925042 ~ 35925484 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013872
CTCGTCACGCATCATACGATGTTGTGCACACGCAGGCAAACGCTGAGGTGAGCCTTTACACGTTTATGAGGATTGTATAGTGTAGGCTACTGTAAACCATAAATTTGAAAAACTGCTTAAAATGTCTACTTTTGAAATGCTAATTGAATTATCCGTcattttaatttgtcatttaacaGCACATTAGTTTGTAGAGtcatttttgtgtttaattttgcaGATTTCCAGCTAATAATGGTTCTGTGACACGTTAAAATCAACATCACATCACTGTGAAAATACGAAAAAAGTAATGACAACAAACATATTTGTTactttaactgttttatttaatcaATGAATCAGCTAAATTCTTaataaattcatacatttaattcattcattcgttttctttttggcttagtccctttattaatcagggtttaccacagcggaatgaacct

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013872 True 443 lncRNA 0.32 1 35925042 35925484

Neighbor

gene id symbol gene type direction distance location
XLOC_006783 mycla coding downstream 16767 35904335 ~ 35908275 (-)
XLOC_006782 tacc3 coding downstream 32737 35880573 ~ 35892305 (-)
XLOC_006781 map3k4 coding downstream 80081 35787873 ~ 35844961 (-)
XLOC_006780 erlec1 coding downstream 160014 35750690 ~ 35765028 (-)
XLOC_006779 BX663524.1 coding downstream 332665 35592242 ~ 35592377 (-)
XLOC_006785 BX510990.1 coding upstream 36866 35962350 ~ 35962466 (-)
XLOC_006786 zgc:153911 coding upstream 48878 35974362 ~ 35976986 (-)
XLOC_006787 si:ch211-67f13.8 coding upstream 58513 35983997 ~ 35984530 (-)
XLOC_006788 si:ch211-67f13.8 coding upstream 59137 35984621 ~ 35985772 (-)
XLOC_006789 si:dkey-157l19.2 coding upstream 69754 35995238 ~ 36034582 (-)
XLOC_006471 BX537274.2 misc downstream 25660137 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35098817 825904 ~ 826225 (-)
XLOC_006775 CU138575.1 non-coding downstream 554358 35370569 ~ 35370684 (-)
XLOC_006774 NA non-coding downstream 635605 35205297 ~ 35289437 (-)
XLOC_006773 CR932983.2 non-coding downstream 730283 35182994 ~ 35194759 (-)
XLOC_006769 BX649403.2 non-coding downstream 1280761 34644150 ~ 34644281 (-)
XLOC_006797 CR361558.1 non-coding upstream 473776 36399260 ~ 36399375 (-)
XLOC_006804 BX927407.1 non-coding upstream 662286 36587770 ~ 36612159 (-)
XLOC_006814 NA non-coding upstream 1070149 36995633 ~ 36997760 (-)
XLOC_006815 NA non-coding upstream 1084328 37009812 ~ 37012236 (-)

Expression


Co-expression Network