XLOC_006789 (si:dkey-157l19.2)


Basic Information

Item Value
gene id XLOC_006789
gene name si:dkey-157l19.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 35995238 ~ 36034582 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013062
AGACTCACTGCTCTCTGAGGGACGACTTTGTCCGAAAACAGTTTTGTGGAAATGCCTCACCTGAACTTTCCAGACCAGACTCACATGGTCCGTCCGATCTAAGGGATTTTATAGCGCTGGACGAGAGGAAACTGGGGGATCCCGACTATacagGCTTTGTGATGTCCTCGGGCCGTGAGTCTATAGGGGATCTGATTCCCCTGGATATGCTGCAGGTGTTCAGTGAGGAGCGTCAGCATGGCAGAGGCAAACGGGGCGGCAGAAGGGCAGCATCCTTCAGGCGCGCGTTCAAGTGGTTCAAGAGCCAGCGCAGGAAAACTCGCAGACGTGCTACTGAAAAACATGGAGACCTGCTCGCCACTGGATCACCTGTGGAACTGCCACCAGCCACACTTAACACAGgCCTTAAAGAGGAGGTTGTAGGCACCGTTTCTCTTCAGCAGTTCCAAGAAAACGTGTTTGTGGAGGGTGATCGACCTAAATATGTGTTGGACCTCCACACAGAAGCCCAGCAGGGCCTGAAACTGCAACAGCAAGAGGATGACAGGAATGGGACGGACTTCCCTGATGACCAAAGCATGATTTCAACAGTAACTGCTCAGACTGAAGACAGCATGGCCTTCAGTGAGCTGAGAGGCTTTGAGTCTGAGAGCACAGCAGCCG

Function

symbol description
si:dkey-157l19.2 Predicted to be involved in cell differentiation and lens development in camera-type eye. Orthologous to human KIAA1522 (KIAA1522).

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0002088 lens development in camera-type eye biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-190 Predicted to be involved in cell differentiation and lens development in camera-type eye. Orthologous to human KIAA1522 (KIAA1522).

Ensembl:

ensembl_id ENSDARG00000060340

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013062 True 663 mRNA 0.53 5 35995238 36034582

Neighbor

gene id symbol gene type direction distance location
XLOC_006788 si:ch211-67f13.8 coding downstream 9466 35984621 ~ 35985772 (-)
XLOC_006787 si:ch211-67f13.8 coding downstream 10708 35983997 ~ 35984530 (-)
XLOC_006786 zgc:153911 coding downstream 18252 35974362 ~ 35976986 (-)
XLOC_006785 BX510990.1 coding downstream 32772 35962350 ~ 35962466 (-)
XLOC_006784 NA coding downstream 69754 35925042 ~ 35925484 (-)
XLOC_006790 lgmn coding upstream 3388 36037970 ~ 36050327 (-)
XLOC_006791 pcnx1 coding upstream 19403 36053985 ~ 36134401 (-)
XLOC_006792 med6 coding upstream 100540 36135122 ~ 36141486 (-)
XLOC_006793 map3k9 coding upstream 130057 36164639 ~ 36184701 (-)
XLOC_006794 slc8a3 coding upstream 162196 36196778 ~ 36264861 (-)
XLOC_006471 BX537274.2 misc downstream 25730333 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35169013 825904 ~ 826225 (-)
XLOC_006779 BX663524.1 non-coding downstream 402861 35592242 ~ 35592377 (-)
XLOC_006775 CU138575.1 non-coding downstream 624554 35370569 ~ 35370684 (-)
XLOC_006774 NA non-coding downstream 705801 35205297 ~ 35289437 (-)
XLOC_006797 CR361558.1 non-coding upstream 364678 36399260 ~ 36399375 (-)
XLOC_006804 BX927407.1 non-coding upstream 553188 36587770 ~ 36612159 (-)
XLOC_006814 NA non-coding upstream 961051 36995633 ~ 36997760 (-)
XLOC_006815 NA non-coding upstream 975230 37009812 ~ 37012236 (-)
XLOC_006817 NA non-coding upstream 1075630 37110212 ~ 37110536 (-)

Expression


Co-expression Network