XLOC_006793 (map3k9)


Basic Information

Item Value
gene id XLOC_006793
gene name map3k9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36164639 ~ 36184701 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013073
GGGAGGGGGCGAGTGCAGGCTCAGGAGCGGATGAGGGTGCGGGACAATGTTGTAGCCAATTAACGCAAGAAGTGCCTTATGTTCGGGACCGAAAGATCGTTTCATGAACCCTGAGCAGTCCCGTATGAGGAGGGCGGCAGGTCTGGAGCTCGTTGAGGCGAGAGGCTGCTCGGATTAACCGCTACTTATGCTGCGGCTTTGCGCCCGGTCTTGAGCTCTGCGGCAGGTGAGGAGCAGCAGAACCGGGCCGGTCGCCCCTATGGATCGGCAGCATGGATGCTTTCAGTTTCCCCTTTAACAGCAGTGGCCCGGACAGCGCAGACGGAGATGGAGCCGCCGCAGAGCCTCAGCCGGGGGCTCGTCTCCTCGGGTTTGGCCCTGCGGCGGCGGCGACCCCATCCGGTGCCGGTTACTGGACCGCCGTGTTCGACTACGAGGCGACCGCCGAGGACGAGCTCAGCCTGCGGAAGGGGGATCGGGTAGAGGTGCTGTCCAAGGACTCGCTGGTGTCCGGGGATGAGGGCTGGTGGACAGGTATGATCGAGGACCGGGTCGGTATTTTCCCTAGTAACTACGTGAGCAGTAACGGAATCTCGGAGAAGATCCGGGACACGCCGGAGGACTATTGCGACTATTCGGTGCCACCGTTACACTTGCTGCAGATAGATTTCAGTGAGCTGGCTCTGGAGGAGATGATCGGGGTTGGTGGTTTTGGGAAAGTGTACCGTGCCATTTGGAATGGGCAGGAGGTGGCGGTAAAGGCGGCCCGCCGGGACCCGGATGAGGACGTGTCTCAGACGTTGGAGAGTGTTCGTCAGGAGGCCAAGCTCTTTGCCATGCTCACACACCCCAACATCATGGCTCTTCTGGGTGTGTGTCTGCAGGAGCCCAACCTGTGTCTGGTTATGGAGTACGCCCGCGGCGGGCCGCTCAACCGGGCCCTCGCAGGGAAACGCATCCCTCCACACACGCTGGTGGACTGGGCTGTGCAGATCGCACGCGCCATGCTGTACCTGCACTGCCAGGCCATCGTACCTGTTATCCACAGAGACCTCAAGTCCAGCAACATTCTGATCCTGGAGCGTGTGGAGAACGATGATTTGAGCAACAAGACTCTGAAGGTGACAGATTTTGGTTTGGCTCGAGAGTGGCATCGGACCACGAAGATGAGTGCGGCGGGCACGTACGCCTGGATGGCACCTGAGGTCATCCGATCATCCACCTTCTCCAAAGGCAGTGATGTGTGGAGTTACGGGGTTTTGTTGTGGGAGCTGCTGACAGGAGAGGTGCCGTTTCGTGGTATTGACGGTCTGGCAGTGGCTTATGGTGTGGCCATGAATAAACTGTCCCTGCCCATTCCCTCCACCTGTCCTGAGCCGTTCGCCCGGCTGATGGAAGACTGCTGGAATGTGGACCCTCACTCACGACCCCCCTTCACTAGTATCCTTGACCAGCTTACAGCCATCGAGGAGTCCGGCTTCTTTGAAATGCCTGCAGAATCATTCCAGTCGCTGCAGGATGACTGGAAGCTGGAGGTTCAGGAGATGTTCGACCAGCTCAGAGCCAAAGAGAAGGAGTTGAGATCCTGGGAGGAGGAACTGAGTCGTGCAGCTCTACAGCAGAAGTACCAGGAGGAGGCTTTACGGCGACGAGAGCAAGAGCTGGCAGAGAGAGAAATTCACATCCTGGAGCGAGAGCTCAACGTCATCATTCACCAGCTGTACCAGGAGAAACCACGAGTGCAGCACCGACACGGAAAGTTCCGGCGCAGTCGACTTAAACTGCGGGATGGGAACCGCATCAGCCTGCCTTCTGATTTCCAGCATAAAATCACAGTCCAAGCATCTCCTTCTTTGGACAGGAGGCGGAGCCTATTAGGAAGCAACTCCACCCCTCCAAACAGCCCCCCTGTTTTACCACGTCTTCGAGCGATCCA
>TCONS_00013074
GGTGAGGAGCAGCAGAACCGGCCGGGGGCTCGTCTCCTCGGGTTTGGCCCTGCGGCGGCGGCGACCCCATCCGGTGCCGGTTACTGGACCGCCGTGTTCGACTACGAGGCGACCGCCGAGGACGAGCTCAGCCTGCGGAAGGGGGATCGGGTAGAGGTGCTGTCCAAGGACTCGCTGGTGTCCGGGGATGAGGGCTGGTGGACAGGTATGATCGAGGACCGGGTCGGTATTTTCCCTAGTAACTACGTGAGCATGCTGCAGATAGATTTCAGTGAGCTGGCTCTGGAGGAGATGATCGGGGTTGGTGGTTTTGGGAAAGTGTACCGTGCCATTTGGAATGGGCAGGAGGTGGCGGTAAAGGCGGCCCGCCGGGACCCGGATGAGGACGTGTCTCAGACGTTGGAGAGTGTTCGTCAGGAGGCCAAGCTCTTTGCCATGCTCACACACCCCAACATCATGGCTCTTCTGGGTGTGTGTCTGCAGGAGCCCAACCTGTGTCTGGTTATGGAGTACGCCCGCGGCGGGCCGCTCAACCGGGCCCTCGCAGGGAAACGCATCCCTCCACACACGCTGGTGGACTGGGCTGTGCAGATCGCACGCGCCATGCTGTACCTGCACTGCCAGGCCATCGTACCTGTTATCCACAGAGACCTCAAGTCCAGCAACATTCTGATCCTGGAGCGTGTGGAGAACGATGATTTGAGCAACAAGACTCTGAAGGTGACAGATTTTGGTTTGGCTCGAGAGTGGCATCGGACCACGAAGATGAGTGCGGCGGGCACGTACGCCTGGATGGCACCTGAGGTCATCCGATCATCCACCTTCTCCAAAGGCAGTGATGTGTGGAGGTGGGCATCAGGAAGATGgtttgtgtgttag

Function

symbol description
map3k9 Predicted to enable JUN kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K9 (mitogen-activated protein kinase kinase kinase 9).

GO:

id name namespace
GO:0007257 activation of JUN kinase activity biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004706 JUN kinase kinase kinase activity molecular_function

KEGG:

id description
ko04013 MAPK signaling pathway - fly
ko04361 Axon regeneration
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-081113-5 Predicted to enable JUN kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K9 (mitogen-activated protein kinase kinase kinase 9).

Ensembl:

ensembl_id ENSDARG00000013491

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013073 False 1936 mRNA 0.58 7 36164639 36184701
TCONS_00013074 True 879 mRNA 0.60 4 36175772 36184476

Neighbor

gene id symbol gene type direction distance location
XLOC_006792 med6 coding downstream 23153 36135122 ~ 36141486 (-)
XLOC_006791 pcnx1 coding downstream 30238 36053985 ~ 36134401 (-)
XLOC_006790 lgmn coding downstream 114312 36037970 ~ 36050327 (-)
XLOC_006789 si:dkey-157l19.2 coding downstream 130057 35995238 ~ 36034582 (-)
XLOC_006788 si:ch211-67f13.8 coding downstream 178867 35984621 ~ 35985772 (-)
XLOC_006794 slc8a3 coding upstream 12077 36196778 ~ 36264861 (-)
XLOC_006795 cox16 coding upstream 127193 36311894 ~ 36319308 (-)
XLOC_006796 actn1 coding upstream 136387 36321088 ~ 36391502 (-)
XLOC_006797 CR361558.1 coding upstream 214559 36399260 ~ 36399375 (-)
XLOC_006798 dcaf5 coding upstream 221573 36406274 ~ 36439061 (-)
XLOC_006471 BX537274.2 misc downstream 25899734 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35338414 825904 ~ 826225 (-)
XLOC_006785 BX510990.1 non-coding downstream 202173 35962350 ~ 35962466 (-)
XLOC_006784 NA non-coding downstream 239155 35925042 ~ 35925484 (-)
XLOC_006779 BX663524.1 non-coding downstream 572262 35592242 ~ 35592377 (-)
XLOC_006775 CU138575.1 non-coding downstream 793955 35370569 ~ 35370684 (-)
XLOC_006774 NA non-coding downstream 875202 35205297 ~ 35289437 (-)
XLOC_006804 BX927407.1 non-coding upstream 403069 36587770 ~ 36612159 (-)
XLOC_006814 NA non-coding upstream 810932 36995633 ~ 36997760 (-)
XLOC_006815 NA non-coding upstream 825111 37009812 ~ 37012236 (-)
XLOC_006817 NA non-coding upstream 925511 37110212 ~ 37110536 (-)

Expression


Co-expression Network