XLOC_006796 (actn1)


Basic Information

Item Value
gene id XLOC_006796
gene name actn1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36321088 ~ 36391502 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013077
GCTGCCGATGCTCGTGCTGGAGGTTCTGCCTACTCGCCACTCTGGATAGCGGCGGTGAAAAAACGGACAGAGCTAGAAAGACGAGGAGATACAGACTTTGGTGTGAGTGAACGGGGCAGGGAAACGAGGCAGTGACGTTAGTTTCGTGCTCATCGTTTTAAGTGCGCACGGGAGTGTTTACTGCAGCGCtctgtgggagagagagagagagagaccggaGGACCGGAGAGAGACGGGGACAGCAGTTCAGAATGGATCACCACCACCATCCACAAcatcaccatcaccatcaataTGATGGAGGAGAGAACGACTATATGCAGCAGGAAGATGACTGGGACCGGGATATGCTGCTCGACCCCGCCTGGGAGAAACAGCAGAGAAAGACGTTTACTGCCTGGTGCAATTCTCATCTACGGAAGGCGGGTACACAAATTGAAAACATAGAGGAGGATTTTAGAGACGGACTCAAACTCATGCTGCTCCTAGAGGTCATCTCAGGAGAACGCCTGGCCAAACCAGAGAGAGGAAAAATGAGAGTCCACAAGATCTCCAATGTGAATAAAGCTCTGGGCTTCATCGCCAGCAAAGGAGTCAAACTGGTTTCTATTGGAGCAGAGGAGATTGTTGATGGAAATGCTAAGATGACTCTCGGGATGATCTGGACCATTATCCTTCGCTTCGCCATCCAGGACATCTCAGTGGAggaGACCTCAGCGAAAGAAGGCCTGCTGTTGTGGTGCCAGAGGAAAACGGCTCCctacaaaaatgtcaacattCAGAATTTCCACATCAGcTGGAAGGATGGATTGGGCTTCTGTGCGCTCATTCACAGACATCGGCCAGAGCTCATCGATTACAATAAACTGCGCAAGGACGACCCCATGACGAATCTGAACACGGCCTTCGATGTTGCTGAGAAGTATCTGGACATCCCGAAGATGCTGGACGCAGAAGATATTGTTGGTACGGCCCGTCCCGATGAGAAGGCCATCATGACCTACGTTTCTAGCTTCTACCATGCCTTCTCCGGGGCGCAGAAGGCCGAAACGGCAGCCAATCGGATCTGCAAAGTGCTGGCTGTCAATCAGGAGAACGAGCAGCTGATGGAGGACTATGAGAAACTAGCCAGTGATCTCCTGGAGTGGATTCGCAGAACCATCCCGTGGTTGGAGAACCGCGTCCCAGAGAACACCATGCAGGCCATGCAGCAGAAGCTGGAGGATTTCCGGGACTACAGACGACTTCACAAACCACCCAAAGTTCAGGAAAAATGCCAGCTGGAGATCAACTTCAACACACTGCAGACCAAACTGCGTCTCAGCAACCGGCCAGCGTTCATGCCTTCGGAGGGAAAGATGGTCTCGGACATCTCCAATTCATGGGGACGTCTGGAGGGGGCAGAGAAGGGTTATGAAGAGTGGCTGCTCAATGAGATCCGCAGACTTGAGAGACTCGATCATCTTGCTGAGAAATTCCGCCAAAAAGCTGCCATTCACGAGGCCTGGACTGACGGTAAAGAGGAGATGTTGCAGCACAAAGACTTTGAGACGGCGTCACTGTCCGAGATCAAGGCTCTGCTGAAGAAACACGAGGCCTTTGAGAGCGACCTCGCAGCTCATCAGGACAGAGTGGAGCAGATCGCTGCCATCGCTCAGGAGCTCAAtgaGCTGGAGTATTACGACTCTCCCAGTGTAAATGCTCGCTGTCAGCGCATCTGTGATCAGTGGGATTCGCTGGGAGTGTTAACTCAGAAACGCAGTGAGGCCTTGCAGAGAACTGAGAAACTGTTGGAAACTATTGATCAGCTTTACCTGGAGTTCGCCAAAAGAGCAGCGCCCTTTAATAACTGGATGGAGGGAGCAATGGAGGACCTGCAGGACACTTTTATAGTCCACACCATTGAGGAAATACAGggtCTCAGCACAGCCCATGAGCAGTTTAAAGCCACACTGCCTGAGGCAGATAAGGAGCGACAGGCCATCCTGGGCATCCATAATGAAATTGCTAAAATTGTGCAGACATACCACGTCAACATGGCTGGCCAAAACCCCTACACCACCATCAACCCCCAGGAGATCAATGCCAAGTGGGATAAGGTGAGGCAGTTGGTGCCCCAGAGAGATCAGGCCCTGATAGAGGAACACGCTCgtcagcagaataatgagaggcTGCGCAGACAGTTTGCTAATCAGGCTAATGTTATCGGGCCCTGGATCCAGACCAAGATGGAGGAAATCGGCCGAATCTCTATTGAGATGCACGGGACTTTGGAGGATCAGCTGACCCACCTGCGTCAGTACGAAAAGAGCATTGTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACACACTAACTACACCATGGagCACATCCGTGTGGGTTGGGAGCAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAGACCACTCGGGCACTCTGGGCGCTGAGGAGTTCAAAGCCTGCCTTATCAGTCTGGGCTTCGATATCGGGAACGACGCTCAgGGAGAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTCctacaaacacacagaaacgcatattcatacacacacacagctcgcACACtatgaaaGTAACAGTGGCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCcagatcagccaatcagagcagctTCCATCAGCTCCACCCAATGACGTtggctcgttttttttttttgtatcgtCCTTTCAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTctttctctccagtgtgttcaTGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATGCGATTGGTTCACTTTTTTTACCTTCTGTAAATGCTCGTTGATGAGACGGCGAGTCAGATTTCATGAACAGATCTTCTCCTTTTCTGCTTCCAAATGTAACATTGAAAAACTTCCCCACAGGAGgaatgttttgtgtatttttacttcttgttttgtttttttctcctcttCATAAAGGAATAAAGgtaacatattttattatacagaacaaaaaaaggtatttttcTTCACCTTAttaaaaaaacgtttaaaaaaaatgaaaatttaaataaagaaacgatcacagtt
>TCONS_00013078
GTTTTTGCTGCCGATGCTCGTGCTGGAGGTTCTGCCTACTCGCCACTCTGGATAGCGGCGGTGAAAAAACGGACAGAGCTAGAAAGACGAGGAGATACAGACTTTGGTGTGAGTGAACGGGGCAGGGAAACGAGGCAGTGACGTTAGTTTCGTGCTCATCGTTTTAAGTGCGCACGGGAGTGTTTACTGCAGCGCtctgtgggagagagagagagagagaccggaGGACCGGAGAGAGACGGGGACAGCAGTTCAGAATGGATCACCACCACCATCCACAAcatcaccatcaccatcaataTGATGGAGGAGAGAACGACTATATGCAGCAGGAAGATGACTGGGACCGGGATATGCTGCTCGACCCCGCCTGGGAGAAACAGCAGAGAAAGACGTTTACTGCCTGGTGCAATTCTCATCTACGGAAGGCGGGTACACAAATTGAAAACATAGAGGAGGATTTTAGAGACGGACTCAAACTCATGCTGCTCCTAGAGGTCATCTCAGGAGAACGCCTGGCCAAACCAGAGAGAGGAAAAATGAGAGTCCACAAGATCTCCAATGTGAATAAAGCTCTGGGCTTCATCGCCAGCAAAGGAGTCAAACTGGTTTCTATTGGAGCAGAGGAGATTGTTGATGGAAATGCTAAGATGACTCTCGGGATGATCTGGACCATTATCCTTCGCTTCGCCATCCAGGACATCTCAGTGGAggaGACCTCAGCGAAAGAAGGCCTGCTGTTGTGGTGCCAGAGGAAAACGGCTCCctacaaaaatgtcaacattCAGAATTTCCACATCAGcTGGAAGGATGGATTGGGCTTCTGTGCGCTCATTCACAGACATCGGCCAGAGCTCATCGATTACAATAAACTGCGCAAGGACGACCCCATGACGAATCTGAACACGGCCTTCGATGTTGCTGAGAAGTATCTGGACATCCCGAAGATGCTGGACGCAGAAGATATTGTTGGTACGGCCCGTCCCGATGAGAAGGCCATCATGACCTACGTTTCTAGCTTCTACCATGCCTTCTCCGGGGCGCAGAAGGCCGAAACGGCAGCCAATCGGATCTGCAAAGTGCTGGCTGTCAATCAGGAGAACGAGCAGCTGATGGAGGACTATGAGAAACTAGCCAGTGATCTCCTGGAGTGGATTCGCAGAACCATCCCGTGGTTGGAGAACCGCGTCCCAGAGAACACCATGCAGGCCATGCAGCAGAAGCTGGAGGATTTCCGGGACTACAGACGACTTCACAAACCACCCAAAGTTCAGGAAAAATGCCAGCTGGAGATCAACTTCAACACACTGCAGACCAAACTGCGTCTCAGCAACCGGCCAGCGTTCATGCCTTCGGAGGGAAAGATGGTCTCGGACATCTCCAATTCATGGGGACGTCTGGAGGGGGCAGAGAAGGGTTATGAAGAGTGGCTGCTCAATGAGATCCGCAGACTTGAGAGACTCGATCATCTTGCTGAGAAATTCCGCCAAAAAGCTGCCATTCACGAGGCCTGGACTGACGGTAAAGAGGAGATGTTGCAGCACAAAGACTTTGAGACGGCGTCACTGTCCGAGATCAAGGCTCTGCTGAAGAAACACGAGGCCTTTGAGAGCGACCTCGCAGCTCATCAGGACAGAGTGGAGCAGATCGCTGCCATCGCTCAGGAGCTCAAtgaGCTGGAGTATTACGACTCTCCCAGTGTAAATGCTCGCTGTCAGCGCATCTGTGATCAGTGGGATTCGCTGGGAGTGTTAACTCAGAAACGCAGTGAGGCCTTGCAGAGAACTGAGAAACTGTTGGAAACTATTGATCAGCTTTACCTGGAGTTCGCCAAAAGAGCAGCGCCCTTTAATAACTGGATGGAGGGAGCAATGGAGGACCTGCAGGACACTTTTATAGTCCACACCATTGAGGAAATACAGggtCTCAGCACAGCCCATGAGCAGTTTAAAGCCACACTGCCTGAGGCAGATAAGGAGCGACAGGCCATCCTGGGCATCCATAATGAAATTGCTAAAATTGTGCAGACATACCACGTCAACATGGCTGGCCAAAACCCCTACACCACCATCAACCCCCAGGAGATCAATGCCAAGTGGGATAAGGTGAGGCAGTTGGTGCCCCAGAGAGATCAGGCCCTGATAGAGGAACACGCTCgtcagcagaataatgagaggcTGCGCAGACAGTTTGCTAATCAGGCTAATGTTATCGGGCCCTGGATCCAGACCAAGATGGAGGAAATCGGCCGAATCTCTATTGAGATGCACGGGACTTTGGAGGATCAGCTGACCCACCTGCGTCAGTACGAAAAGAGCATTGTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACACACTAACTACACCATGGagCACATCCGTGTGGGTTGGGAGCAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAGACCACTCGGGCACTCTGGGCGCTGAGGAGTTCAAAGCCTGCCTTATCAGTCTGGGCTTCGATATCGGGAACGACGCTCAgGGAGAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTCctacaaacacacagaaacgcatattcatacacacacacagctcgcACACtatgaagcaggtcgcacaccagaagcgccgctcggcgccgcgacacggcgcgtacatgacagattaaagtatcgcacaccagacgcgcacattcgaatgatatttaacatgaaactaatcagatggcgctctgtggcgcggctgaaaaatgaactgcgtcctgagccgtcgccgggcgccgccgacagccgccgacttgcggcgccggtgtgtgtatcctgatagaaacctatgtttagaattctaaaatacatggcgctgcgtggcgctgcgcggcgcgccgccgagcgtcgcttctggtgtgcgacctgcttgagaGTAACAGTGGCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCcagatcagccaatcagagcagctTCCATCAGCTCCACCCAATGACGTtggctcgttttttttttttgtatcgtCCTTTCAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTctttctctccagtgtgttcaTGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATGCGATTGGTTCACTTTTTTTACCTTCTGTAAATGCTCGTTGATGAGACGGCGAGTCAGATTTCATGAACAGATCTTCTCCTTTTCTGCTTCCAAATGTAACATTGAAAAACTTCCCCACAGGAGgaatgttttgtgtatttttacttcttgttttgtttttttctcctcttCATAAAGGAATAAAGgtaacatattttattatacagaacaaaaaaaggtatttttcTTCACCTTAttaaaaaaacgtttaaaaaaaatgaaaatttaaataaagaaacgatcacagtt
>TCONS_00013079
CGATGCTCGTGCTGGAGGTTCTGCCTACTCGCCACTCTGGATAGCGGCGGTGAAAAAACGGACAGAGCTAGAAAGACGAGGAGATACAGACTTTGGTGTGAGTGAACGGGGCAGGGAAACGAGGCAGTGACGTTAGTTTCGTGCTCATCGTTTTAAGTGCGCACGGGAGTGTTTACTGCAGCGCtctgtgggagagagagagagagagaccggaGGACCGGAGAGAGACGGGGACAGCAGTTCAGAATGGATCACCACCACCATCCACAAcatcaccatcaccatcaataTGATGGAGGAGAGAACGACTATATGCAGCAGGAAGATGACTGGGACCGGGATATGCTGCTCGACCCCGCCTGGGAGAAACAGCAGAGAAAGACGTTTACTGCCTGGTGCAATTCTCATCTACGGAAGGCGGGTACACAAATTGAAAACATAGAGGAGGATTTTAGAGACGGACTCAAACTCATGCTGCTCCTAGAGGTCATCTCAGGAGAACGCCTGGCCAAACCAGAGAGAGGAAAAATGAGAGTCCACAAGATCTCCAATGTGAATAAAGCTCTGGGCTTCATCGCCAGCAAAGGAGTCAAACTGGTTTCTATTGGAGCAGAGGAGATTGTTGATGGAAATGCTAAGATGACTCTCGGGATGATCTGGACCATTATCCTTCGCTTCGCCATCCAGGACATCTCAGTGGAggaGACCTCAGCGAAAGAAGGCCTGCTGTTGTGGTGCCAGAGGAAAACGGCTCCctacaaaaatgtcaacattCAGAATTTCCACATCAGcTGGAAGGATGGATTGGGCTTCTGTGCGCTCATTCACAGACATCGGCCAGAGCTCATCGATTACAATAAACTGCGCAAGGACGACCCCATGACGAATCTGAACACGGCCTTCGATGTTGCTGAGAAGTATCTGGACATCCCGAAGATGCTGGACGCAGAAGATATTGTTGGTACGGCCCGTCCCGATGAGAAGGCCATCATGACCTACGTTTCTAGCTTCTACCATGCCTTCTCCGGGGCGCAGAAGGCCGAAACGGCAGCCAATCGGATCTGCAAAGTGCTGGCTGTCAATCAGGAGAACGAGCAGCTGATGGAGGACTATGAGAAACTAGCCAGTGATCTCCTGGAGTGGATTCGCAGAACCATCCCGTGGTTGGAGAACCGCGTCCCAGAGAACACCATGCAGGCCATGCAGCAGAAGCTGGAGGATTTCCGGGACTACAGACGACTTCACAAACCACCCAAAGTTCAGGAAAAATGCCAGCTGGAGATCAACTTCAACACACTGCAGACCAAACTGCGTCTCAGCAACCGGCCAGCGTTCATGCCTTCGGAGGGAAAGATGGTCTCGGACATCTCCAATTCATGGGGACGTCTGGAGGGGGCAGAGAAGGGTTATGAAGAGTGGCTGCTCAATGAGATCCGCAGACTTGAGAGACTCGATCATCTTGCTGAGAAATTCCGCCAAAAAGCTGCCATTCACGAGGCCTGGACTGACGGTAAAGAGGAGATGTTGCAGCACAAAGACTTTGAGACGGCGTCACTGTCCGAGATCAAGGCTCTGCTGAAGAAACACGAGGCCTTTGAGAGCGACCTCGCAGCTCATCAGGACAGAGTGGAGCAGATCGCTGCCATCGCTCAGGAGCTCAAtgaGCTGGAGTATTACGACTCTCCCAGTGTAAATGCTCGCTGTCAGCGCATCTGTGATCAGTGGGATTCGCTGGGAGTGTTAACTCAGAAACGCAGTGAGGCCTTGCAGAGAACTGAGAAACTGTTGGAAACTATTGATCAGCTTTACCTGGAGTTCGCCAAAAGAGCAGCGCCCTTTAATAACTGGATGGAGGGAGCAATGGAGGACCTGCAGGACACTTTTATAGTCCACACCATTGAGGAAATACAGggtCTCAGCACAGCCCATGAGCAGTTTAAAGCCACACTGCCTGAGGCAGATAAGGAGCGACAGGCCATCCTGGGCATCCATAATGAAATTGCTAAAATTGTGCAGACATACCACGTCAACATGGCTGGCCAAAACCCCTACACCACCATCAACCCCCAGGAGATCAATGCCAAGTGGGATAAGGTGAGGCAGTTGGTGCCCCAGAGAGATCAGGCCCTGATAGAGGAACACGCTCgtcagcagaataatgagaggcTGCGCAGACAGTTTGCTAATCAGGCTAATGTTATCGGGCCCTGGATCCAGACCAAGATGGAGGAAATCGGCCGAATCTCTATTGAGATGCACGGGACTTTGGAGGATCAGCTGACCCACCTGCGTCAGTACGAAAAGAGCATTGTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACACACTAACTACACCATGGagCACATCCGTGTGGGTTGGGAGCAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAGACCACTCGGGCACTCTGGGCGCTGAGGAGTTCAAAGCCTGCCTTATCAGTCTGGGCTTCGATATCGGGAACGACGCTCAgGGAGAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTCctacaaacacacagaaacgcatattcatacacacacacagctcgcACACtatgaagcagTAACAGTGGCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCcagatcagccaatcagagcagctTCCATCAGCTCCACCCAATGACGTtggctcgttttttttttttgtatcgtCCTTTCAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTctttctctccagtgtgttcaTGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATGCGATTGGTTCACTTTTTTTACCTTCTGTAAATGCTCGTTGATGAGACGGCGAGTCAGATTTCATGAACAGATCTTCTCCTTTTCTGCTTCCAAATGTAACATTGAAAAACTTCCCCACAGGAGgaatgttttgtgtatttttacttcttgttttgtttttttctcctcttCATAAAGGAATAAAGgtaacatattttattatacagaacaaaaaaaggtatttttcTTCACCTTAttaaaaaaacgtttaaaaaaaatgaaaatttaaataaagaaacgatcaca
>TCONS_00013080
cgctatcccatgatgccatgCTAGAGAATTCTTGAATGTGATTGAAGTGACTCAACTGACTCAGGCAGGTCATGTGACAATGACAAATGGTGAATACAGTACCTTCGAAATCCATTCATACTCCtgacattcatactatatagaaagTAGTTTTCTAATGATTGTGTAGTAAATTAAATTCCAATGTAGTACcacctactaagtagtaggcaatttcagatgcagccaaaCACTTTTTTTAGTGAATCAACTTAAAGTACAACCTAAAGTATAACAATGTGcacaacaaaataattttatttcacaCAAACCTCAGTGAACACGTAACCCTGTCTTGCTGCAGAACTATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTCctacaaacacacagaaacgcatattcatacacacacacagctcgcACACtatgaagcagTAACAGTGGCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCcagatcagccaatcagagcagctTCCATCAGCTCCACCCAATGACGTtggctcgttttttttttttgtatcgtCCTTTCAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTctttctctccagtgtgttcaTGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGTATGTGACATTATGCAACAATCGGTTTGGAATATGTGTAACGGCAGCATCATGTGACCTCTGACTGCATGTTGATGTGATGCGATTGGTTCAC
>TCONS_00013081
GTAAACTACAAACCAAAGATCGACCAGCTGGAGGGGGACCATCAGCTAATACAGGAAGCACTTATATTTGACAATAAACACACTAACTACACCATGGagCACATCCGTGTGGGTTGGGAGCAGCTCCTCACCACCATCGCTCGCACCATTAATGAGATTGAAAACCAGATCCTGACACGTGACGCCAAAGGCATCAGCCAGGAGCAAATGAATGAGTTCAGAGCCTCGTTCAACCACTTCGACCGAAAGAGAACAGGCATGATGGATGCTGAAGACTTCAGAGCCTGCCTCATCTCCATGGGTTATAATATGGGAGAGGCGGAGTTTGCTCGCATCATGAGCATCGTGGATCCCAACAGACTGGGAGTCGTCACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAAACGGCTGACACGGACACTGCAGATCAGGTCATGGCATCATTTAAAGTCCTCGCTGGAGACAAGAACTATATCCTGGCGGATGAGCTGAGGCGTGAGCTGCCCCCCGACCAGGCCGAATACTGCATCGCCCGCATGACGCCTTACAGCGGGCCTGATTCCGTCCCGGGAGCGCTCGACTACATGTCTTTCTCTACCGCCCTGTATGGGGAGAGCGACCTCTGAACCGTGACCTGCCTTCTCctacaaacacacagaaacgcatattcatacacacacacagctcgcACACtatgaagcagTAACAGTGGCTCTTAAACGCTGATCTGGAACCAACATGCAGAACTGGTCCcagatcagccaatcagagcagctTCCATCAGCTCCACCCAATGACGTtggctcgttttttttttttgtatcgtCCTTTCAGCCCTTCCTGTGTGTCATATACGACTTCCTGCTctttctctccagtgtgttcaTGAAGTCTGTCTTGCCTGCTTTAGGGATCGTGTCAGAAATGCTGCCTTCACATGCTCGTCTGGATATCACATTAGTGTATGTGACATTATGCAACAATCGGTT

Function

symbol description
actn1 Predicted to enable actin binding activity and calcium ion binding activity. Is expressed in several structures, including head muscle; intestine; nervous system; ovary; and ventral intermandibularis anterior. Human ortholog(s) of this gene implicated in platelet-type bleeding disorder 15. Orthologous to human ACTN1 (actinin alpha 1).

GO:

id name namespace
GO:0051764 actin crosslink formation biological_process
GO:0051017 actin filament bundle assembly biological_process
GO:0005509 calcium ion binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081113-4 Predicted to enable actin binding activity and calcium ion binding activity. Is expressed in several structures, including head muscle; intestine; nervous system; ovary; and ventral intermandibularis anterior. Human ortholog(s) of this gene implicated in platelet-type bleeding disorder 15. Orthologous to human ACTN1 (actinin alpha 1).

Ensembl:

ensembl_id ENSDARG00000007219

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013077 False 3664 mRNA 0.50 22 36321088 36391496
TCONS_00013078 False 3981 mRNA 0.51 21 36321088 36391502
TCONS_00013079 False 3658 nonsense_mediated_decay 0.50 22 36321091 36391491
TCONS_00013080 False 932 lncRNA 0.45 2 36321364 36322604
TCONS_00013081 True 993 nonsense_mediated_decay 0.51 6 36321431 36330899

Neighbor

gene id symbol gene type direction distance location
XLOC_006795 cox16 coding downstream 1780 36311894 ~ 36319308 (-)
XLOC_006794 slc8a3 coding downstream 56227 36196778 ~ 36264861 (-)
XLOC_006793 map3k9 coding downstream 136387 36164639 ~ 36184701 (-)
XLOC_006792 med6 coding downstream 179602 36135122 ~ 36141486 (-)
XLOC_006791 pcnx1 coding downstream 186687 36053985 ~ 36134401 (-)
XLOC_006797 CR361558.1 coding upstream 7758 36399260 ~ 36399375 (-)
XLOC_006798 dcaf5 coding upstream 14772 36406274 ~ 36439061 (-)
XLOC_006799 pacs2 coding upstream 54685 36446187 ~ 36525982 (-)
XLOC_006800 srsf5a coding upstream 135304 36526806 ~ 36535128 (-)
XLOC_006801 FP103009.1 coding upstream 145924 36537426 ~ 36545258 (-)
XLOC_006471 BX537274.2 misc downstream 26056183 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35494863 825904 ~ 826225 (-)
XLOC_006785 BX510990.1 non-coding downstream 358622 35962350 ~ 35962466 (-)
XLOC_006784 NA non-coding downstream 395604 35925042 ~ 35925484 (-)
XLOC_006779 BX663524.1 non-coding downstream 728711 35592242 ~ 35592377 (-)
XLOC_006775 CU138575.1 non-coding downstream 950404 35370569 ~ 35370684 (-)
XLOC_006774 NA non-coding downstream 1031651 35205297 ~ 35289437 (-)
XLOC_006804 BX927407.1 non-coding upstream 196268 36587770 ~ 36612159 (-)
XLOC_006814 NA non-coding upstream 604131 36995633 ~ 36997760 (-)
XLOC_006815 NA non-coding upstream 618310 37009812 ~ 37012236 (-)
XLOC_006817 NA non-coding upstream 718710 37110212 ~ 37110536 (-)

Expression


Co-expression Network