XLOC_006801 (FP103009.1)


Basic Information

Item Value
gene id XLOC_006801
gene name FP103009.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 36537426 ~ 36545258 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013093
ATGGCAAATGAACCCGTTATCCTTAATGTGTATGACATGTACTGGATTAATGAATACACCTCAACTCTGGGTATTGGAGTCTTCCACTCAGGAATAGAGATCTACGGCAGAGAGTTTGCGTATGGTGGCCATCCATATCCCTTCAGTGGCATTTTTGAAATCAACCCTGGAAATGCCTCAGAACTGGGGGAAACGTTCAAATTCAAAGAGGCTATAGCTCTGGGCACAACAGACTTTGCAGAGGAAGACATTGATAAAATAATGGAGGAGCTTGGAAAGGAGTTCAAGGGGAACGCCTACCACCTGATGCACAAAAACTGCAACCATTTTTCTTCCTCGCTCTCTGAGTTGCTGTGTGGAAGAGAAATACCGCGCTGGGTGAATCGATTGGCATATTTCAGCTCCTGTATTCCATTTCTGCAGAGTTGTTTGCCTAAAGAGTGGCTCACGCCTGCTGCCCTCCAGAGCCACATCAGCATGGGCCTGCGGAAGgagaacacacactcacacacacatgaatcCAGTGACGAGGAGCCATCGTCTGCTGCCGAAGCGGCGTCTGGAACATCACACAGCTGCAGACACACCCGTGTgtga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116341

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013093 True 597 mRNA 0.49 5 36537426 36545258

Neighbor

gene id symbol gene type direction distance location
XLOC_006800 srsf5a coding downstream 2298 36526806 ~ 36535128 (-)
XLOC_006799 pacs2 coding downstream 11444 36446187 ~ 36525982 (-)
XLOC_006798 dcaf5 coding downstream 98365 36406274 ~ 36439061 (-)
XLOC_006797 CR361558.1 coding downstream 138051 36399260 ~ 36399375 (-)
XLOC_006796 actn1 coding downstream 145924 36321088 ~ 36391502 (-)
XLOC_006802 synj2bp coding upstream 11947 36557205 ~ 36566260 (-)
XLOC_006803 lgals3a coding upstream 23377 36568635 ~ 36582341 (-)
XLOC_006804 BX927407.1 coding upstream 42512 36587770 ~ 36612159 (-)
XLOC_006805 cdkn3 coding upstream 67672 36612930 ~ 36621926 (-)
XLOC_006806 sos2 coding upstream 93697 36638955 ~ 36663358 (-)
XLOC_006471 BX537274.2 misc downstream 26272521 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 35711201 825904 ~ 826225 (-)
XLOC_006785 BX510990.1 non-coding downstream 574960 35962350 ~ 35962466 (-)
XLOC_006784 NA non-coding downstream 611942 35925042 ~ 35925484 (-)
XLOC_006779 BX663524.1 non-coding downstream 945049 35592242 ~ 35592377 (-)
XLOC_006775 CU138575.1 non-coding downstream 1166742 35370569 ~ 35370684 (-)
XLOC_006814 NA non-coding upstream 450375 36995633 ~ 36997760 (-)
XLOC_006815 NA non-coding upstream 464554 37009812 ~ 37012236 (-)
XLOC_006817 NA non-coding upstream 564954 37110212 ~ 37110536 (-)
XLOC_006819 AL845493.1 non-coding upstream 633344 37178602 ~ 37178716 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_05168339_05174369 SYNJ2BP, DESI2 coding CI01000012 null 5168160 ~ 5174842 (+)