G19965


Basic Information

Item Value
gene id G19965
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 13198680 ~ 13199056 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22425
CACGCTGTAACTGGTATAAAGTGAAGGAGAGGATGTTCACATGCGCTCCGTGCTGCTGCTTCTCTTTAACTGAGATGTCATGCAACATTAAACAGCACCAAAACGGTATTTATTTTTTGAATCTCATAATAAGATGGACGTCATTTGAGACTTTGCTTCATATCAAAAGTAACAAAGCACAAAGATTATTGCGATTTATTGGATGGGAGGCGCGCTACATATTCTGTTCATTCATTAACTGAAAACAGACTAGACTAATCGATTCTTAGGATTTAAGAATCGATATCGGTTCGTAAAAATGAGAATCGATTAAAATCGAGAAATCAATATTTTTTACCCAGCCCTAATAATTTACCTTCCTTTGTGTCATTCCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22425 True 377 lncRNA 0.36 1 13198680 13199056

Neighbor

gene id symbol gene type direction distance location
CI01000001_13160253_13167224 MYB coding upstream 30175 13160253 ~ 13168505 (+)
CI01000001_13011184_13014251 TBPL1 coding upstream 184418 13009419 ~ 13014262 (+)
CI01000001_13002416_13005974 NA coding upstream 192647 13002214 ~ 13006033 (+)
CI01000001_12991367_12993048 NA coding upstream 205237 12991276 ~ 12993443 (+)
CI01000001_12926362_12928572 RPS12, RGD1561102, RPS12-PS2, RPS12P4, GM4925, RPS12.S coding upstream 270101 12925414 ~ 12928579 (+)
CI01000001_13220895_13223877 ARMC1L coding downstream 21839 13220895 ~ 13224370 (+)
CI01000001_13235608_13240350 NA coding downstream 36552 13235608 ~ 13240441 (+)
CI01000001_13242387_13245977 NEMP1 coding downstream 43331 13242387 ~ 13246245 (+)
CI01000001_13266612_13285039 PAN2 coding downstream 67487 13266543 ~ 13285293 (+)
CI01000001_13290327_13291466 PLAGX coding downstream 90551 13289607 ~ 13293479 (+)
G19964 NA non-coding upstream 14 13198376 ~ 13198666 (+)
G19963 NA non-coding upstream 314 13198160 ~ 13198366 (+)
G19952 NA non-coding upstream 27261 13171081 ~ 13171419 (+)
G19846 NA non-coding upstream 94434 13091844 ~ 13104246 (+)
G19935 NA non-coding upstream 107248 13091172 ~ 13091432 (+)
G19967 NA non-coding downstream 943 13199999 ~ 13200235 (+)
G19968 NA non-coding downstream 1523 13200579 ~ 13200795 (+)
G19969 NA non-coding downstream 2046 13201102 ~ 13201305 (+)
G19970 NA non-coding downstream 2376 13201432 ~ 13201633 (+)
G19972 NA non-coding downstream 4494 13203550 ~ 13203772 (+)
G19395 NA other upstream 1516863 11681322 ~ 11681817 (+)
G19314 NA other upstream 1640007 11501194 ~ 11558673 (+)
G19039 NA other upstream 2344697 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2658834 10538388 ~ 10539846 (+)
G18937 NA other upstream 2722291 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 314348 13514115 ~ 13517063 (+)

Expression


Co-expression Network