CI01000004_08847888_08849951


Basic Information

Item Value
gene id CI01000004_08847888_08849951
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8846758 ~ 8850028 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_08847888_08849951.mRNA
ACAGCTTTACAAATTAAACATATCAATTACCTTAAAATAATGTCACATAAGTTTTAGTGTTCTGAGGATTTACGAAAATGGTTCGCACGTTTGTTTTGTTCTTTTTGTTGTGTCTGGTTGGTGTGTTTGATGTTGAGTCACATGCAGTGTCAGTGATGGTGGGACATTCTGTCACTCTGGACTCTAATAGCTCTGAAATACAGCTGGAAAACTTGATCGAGTGGAGGTTCGACGAAATTCGCATAGCTATCGTAATTAAGGGCAATCCTACATATGAGGATGAGAGATTCGGAGACAGACTAAAACTGGACAGAAATGGATCTCTCACCATCACAGACGCCAGAATCACAGACACTGGAGTATATAAATTAAGTATTGTCGGTAAGGTGCAAACCATGGATTCAAACAAGAGATTCAGTGTTACTGTTTATGATCCACTATCCATTCCTGTCATTACCAGCAACATTTCACAGTGTTCATCAAGCCCAAAATGTGTGCTGCTATGTTCAGTGAGGAATGTGACCAGGGTGACTGTCTCCTGGTACAAAGGGAACAGTTCATTGTCCAGCATCAGTGTGTCTGATCTCGGCATCAGTCTCTCTCTACCTCTAGAGGTGGAATATCAGGATAACAACACATACAGCTGTGTGGTGAGCAATCCTCTCAGCAACCAGACCAAACACGTCTGCATTACCGATCTCTGTCGTTTGCATTCAGATGAGGTCCATAACTGTGGAGGGACTGAAACTGTGATCCGATTGGCTGTCACTGCTCTGGTGGGCCTGGCTGCTGTAGCTGCTTTTATTGTGTTGGTTTATGACATCAAATCAAGAAGAAGTGAGCAGGAGAGATACGAGAGCCACAATGATGGAGCTGATATTCTAAAACAACAATAAACAGTCTGCATTTTGAATACTTTTTTTTTATTGTTTTTCTTTTTGGAAAATATAATGAAAGGTATAAAATATATATTTTCTTTTTGGTAGATGATTTTTTTTCTTTCTGAATCCTGGTTCTAGTATGGTTATTAAGAATGTAAAGATCCAAGTAGCTTTATTTGCGTGGTAAAAAAAAAAATCATTTTATTATTTCACAAAATATATATGAGCATTTTATGCAAGTTGCTGTTACAATTCCCGTCTCGTTCTCGTTGCCGGTGGATGGACATGTTCGGTTCACTTACTTTTGTCGTGGCCACGACATATTAACTTGTGGGAACGTGATAATATATCCATCGTGGTCACGAGACAAATTGTGGGAACGTGATAAGTCATGGCCAAGAGATATTCGTGGGAATGTTATATTAACTCGTGGGAACGTGATATAAAGTTGTGACCTCAAGATCTATGTTGAGGGAACAATATATTTTTCTCGTGGCCACAACTTCTTTACGTTGAGGGGACAACATCTATTTCTCATGGCCAAGAGTTACATGCATAACAACATGCAACCTGGAATTATCAGAAATCCTCAACATAGGATCTTGAGGCCACAACTTTACATTGCGTGGCCACGACATAAGGATGTCGTTACCTTGACAAAATGATCTTGTTACCACGACTTATCATACTCCCATGAGTTAATATGACGGTCCCACGAATCTTGTGGCCATGACATATTATCATGTTCCCACGAGTTAATATGTCATGGCCACGACAAAACTAAATGAACCAAACATGCCCCCCTCCCGGTCACCGTATCCCTGTGATTAGTTCCTGATTCTTTGTTTTCATTGCTGTCTTGTTTGTTCCCATAGTTACCCTCATTAGTCACTATAGCAGCTCATCCTCATCTGTTTCTTGTGTCAACATTAGACTTGTTCGAGATGCATCGTAGCTGTATAATGAGTTGCTATGGTGACTAACAAGGGAAACTATGGAAACTAACAAGAGTAATATGGGAACAAACAAGGCAGCAATGGAAACAAAGAAAACAGGAACTAATCACAGGAACAAACGGCGGGAACAATTGAAACAAGATGTTTGTTTCTTTCTTTCTTCACTGTGAGCATCTGATATCTAATAAA

Function

NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_08847888_08849951.mRNA True 2026 mRNA 0.40 4 8846758 8850028

Neighbor

gene id symbol gene type direction distance location
CI01000004_08714010_08716995 NA coding downstream 129699 8713882 ~ 8717059 (-)
CI01000004_08592797_08594424 CLDN11A coding downstream 252139 8592314 ~ 8594619 (-)
CI01000004_08587419_08590454 NA coding downstream 256201 8587327 ~ 8590557 (-)
CI01000004_08361560_08363939 GHSR, GHSRA coding downstream 482739 8361268 ~ 8364019 (-)
CI01000004_08258929_08273708 NA coding downstream 572959 8258778 ~ 8273799 (-)
CI01000004_08857253_08860111 RABGGTB coding upstream 7225 8857253 ~ 8860111 (-)
CI01000004_08861514_08864815 MGC81873, ACADM coding upstream 11212 8861240 ~ 8864815 (-)
CI01000004_08878465_08881325 BEST4 coding upstream 28437 8878465 ~ 8881485 (-)
CI01000004_08887155_08890419 NA coding upstream 35731 8885759 ~ 8890419 (-)
CI01000004_08896031_08915598 NA coding upstream 45547 8895575 ~ 8915662 (-)
G29989 NA non-coding downstream 24281 8822269 ~ 8822477 (-)
G29986 NA non-coding downstream 31221 8813396 ~ 8815537 (-)
G29948 NA non-coding downstream 102352 8741906 ~ 8744406 (-)
G29929 NA non-coding downstream 171331 8675225 ~ 8675427 (-)
G29928 NA non-coding downstream 171693 8674825 ~ 8675065 (-)
G29955 NA non-coding upstream 22105 8872133 ~ 8873812 (-)
G29943 NA non-coding upstream 24669 8874697 ~ 8877199 (-)
G30009 NA non-coding upstream 128996 8979024 ~ 8980984 (-)
G30012 NA non-coding upstream 194397 9044425 ~ 9044678 (-)
G30013 NA non-coding upstream 199928 9049956 ~ 9050446 (-)
G29746 NA other downstream 488631 8354498 ~ 8358127 (-)
G29656 NA other downstream 881258 7964364 ~ 7965500 (-)
G29388 NA other downstream 2214851 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 2301186 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 3219244 5616644 ~ 5628289 (-)
G30316 NA other upstream 527909 9377937 ~ 9406921 (-)
G31203 NA other upstream 1896409 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 2557437 11406957 ~ 11412907 (-)
G32150 NA other upstream 2926491 11776519 ~ 11780951 (-)
G32207 NA other upstream 3526140 12376168 ~ 12384780 (-)

Expression


Co-expression Network