CI01000004_09006723_09020870


Basic Information

Item Value
gene id CI01000004_09006723_09020870
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9006723 ~ 9020870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_09006723_09020870.mRNA
ATGTCGCGCGTTACAGCCGATCTGAATTTTCAAACACTTCTCGAGTGTAATTACTGCTACCCAGAAGATGTTCTTGATGACGTCAAAGATGTGTCGGCAGATTTCCCAAACCTGCAGCTATACGTGGACTATTATCTCTATCCCAACAATGATAAAAAGAAGTTGGTTTATTTGGGTGGTACCGTTCCTGTAACATACGAAGGCTCCAAGTACAATATTCCAGTTTGCATCTGGATCCACGAGACCCATCCCAAAAATCCACCCAGGTGTTACGTCTGCCCTTCACCGTCCATGGTTATCAATGCTAAAAGCAGCAATGTCGATGCCCATGGTCGCATTCTTCTTCACTGTCTCAACAACTGGAAGATTGGATGGTCAAACTTATCCATAGTTCTGGAGGAGATGATTGCTGCCTTTCAGCGTGAAACTCCTCTATTTGCCACCTATCCTGTCCAAAACCCTTCACCACATTCTCAAGCAAAACATCTGCCGGCTGAACTGGTAGTTCAACCGAATTCTGTTTCATCCTATAACAGCTGGCCACATACAGGCAGCAGTTCAGTGCAGAAGACATCAACAGCTCAACACGGAGCATCCAGTTCATCTGTGCCTCAGCATGCCAGCAACAAAAACAGGCAGCATGCTGATCCATTACAGCTTCCGAGATTATTGGTTTATCGTTGTGAATTAATGTTTCAGACTTTCATTTTCTATTCCTGGCTAACCATAAGGTTTCCTTCACCAGTCCTACCCAAGGGTACAAAGTCCCAGATGAACCTGAATCAAGCCAGTGAAACAAAGATGAGTGGGGTAAGGAGATCATACACGCAAGAGTTGCTGGATTTTGGGATCACATTTGGTGCACAAGCTTTGGAGACCAACCACCAAACAAACCCATTCATTTCTCCTGCTTCAGATGTTCTTCATGCTGGAGGAGCGTGGCAGGATTGGGGTGGTAGTCCCAGGGTTCACCCAGGATTAGTGGACAACCATCACAAGGTGGTGGTGAGCAGGCTTCCTGTGGGCATCTCTCCCACCAAAATGAAGAACAAGCTCACCATCTACTTCCAGAGGAAGCAGAATGCAGGAGGAGAAGTTCTGGATGTCAAATACCCTGCAGCACAGCCAGACCAGGCCTGGGTGCTCTTTAGAAATCAGAGAGATGCAGAGCATGTTCTGAGGCAGCCTGACAGGGTGATTACCATTAACGAGCAGCGATTTCTTATTCAGCTGAAGAAGTTTGAGGACATGGAGAATTGCACTACACAAAGAACCTACTGTCAGATCCCAGGTGGTGTCCAAGGTGAGAAAGCTGAAATGTTTAAGAGCATCTTGAGTCTGGAGGGGTGCAGTTTCAGCTCCACAGATGTACTGGAAGCAGTGCAGTCATGCCGAGACCTCACTTCTGCTCTGAAATATCTCTGCCATGATTGCCCTATATGCCAGGAGCAAGTTTCCTTCAACAGGATGGTCACCATGACACACTGCTCTTGCACATTCTGTGAGAGCTGTTTTAAGAAGTACTTCTCCTCTGTCATTAAGGAGAAGAATATAGTACATGCTGTGTGTCCCCTCTGTAATCTTCCCGATGTACGAGGAGGCCGCAGGGAGGACTCTATGGAGTACTTCAGTCTACTCGACACACAGATCAGGTATTATTTAGACCCCCAGATCCACGAGCTCTTCCAGAGGAAGCTCAGAGATCAGGCACTGCAGGAAATGCCCAACTTCCGCTGGTGTGCACATTGTTGCTTTGGGCTCCTTCATGAAGCAGACAGGCTGAGGATGGACTGCCCCAGCTGTGGGAAAAGCACATGCTTTAAATGTAAAAGGCCGTGGGCTCCACAGCATGAAGGAATCTCGTGTGAGAAGTTCAAAGAGTGGGAGCAGCTCAATAGCCCCGAGTACCAAAACTCAAGGCTGGAGCAGCTCCTCAGCAGGAACAAAATAGACTGTCCAAAATGCAAATTTCGCTTCTTCCTGGCTAGAGGAGGCTGTCTGCATTTCAGATGCACTCAGTGCCAGCATGAATTCTGTGGAGGCTGCAGTCAGCCATTTAAACAAGGCTCTGCCTGTAATTTTTCTATCGAGTGCACAGCTAAAGGTTTACATGCTCACCATCCTCGAAACTGCCTATATCATCTGAGAGACTGGAGTGTCCCGAGACTACGGACCCTGCTGCAGCACTATGGGATATCGCATCCCCTCATGTTCAGCCCCAAAGATTCAGTGAGGAGACAGTCTAAAGGCATTTGCGGTGTAATGGAGTTCCAAGAAACAGGAGCTGTGAAAGAGGAGCCATGTGGACGACAAGCTTTCCCAGAGTACAATGGTTACTGCACGTTACATTATAAAGAGTGTCTGGTGGAGCTAATAAACAACAATGCACTGGATCCTGTGGTACTGCTAGATGGTACAGAGTTGAGGGCAGAAATGAACCGCTGGAAAGTGCCAGTCCCAGACAAACAACCTTTAGAGCCGGATCAGCGGTACGAGGACAGACTTCGGCAGATCTTAAAAGAGAAGGTGGGTCTGACCAACGGTACAGTTCTTGGATTGAAGACAGCTGCTCCTCCCACACCATCGCCCTCTTCTCCTCCCGTGGCTGGAGCTCCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_09006723_09020870.mRNA True 2618 mRNA 0.48 20 9006723 9020870

Neighbor

gene id symbol gene type direction distance location
CI01000004_08958415_08969605 U2SURP coding downstream 37118 8958279 ~ 8969605 (-)
CI01000004_08953993_08957525 TMEM59 coding downstream 49198 8953852 ~ 8957525 (-)
CI01000004_08941940_08945864 YIPF1 coding downstream 60859 8941918 ~ 8945864 (-)
CI01000004_08939621_08940367 NA coding downstream 66310 8939329 ~ 8940413 (-)
CI01000004_08931605_08938354 NDC1 coding downstream 68369 8930974 ~ 8938354 (-)
CI01000004_09159241_09169070 NA coding upstream 137605 9158475 ~ 9171717 (-)
CI01000004_09179343_09182737 NA coding upstream 157105 9177975 ~ 9183718 (-)
CI01000004_09324170_09327754 DSELA coding upstream 302676 9323546 ~ 9327754 (-)
CI01000004_09329111_09337596 NA coding upstream 308116 9328986 ~ 9337596 (-)
CI01000004_09367511_09370243 TOE1 coding upstream 346591 9367461 ~ 9370243 (-)
G30009 NA non-coding downstream 25739 8979024 ~ 8980984 (-)
G29943 NA non-coding downstream 129524 8874697 ~ 8877199 (-)
G29955 NA non-coding downstream 132911 8872133 ~ 8873812 (-)
G29989 NA non-coding downstream 184246 8822269 ~ 8822477 (-)
G29986 NA non-coding downstream 191186 8813396 ~ 8815537 (-)
G30012 NA non-coding upstream 23555 9044425 ~ 9044678 (-)
G30013 NA non-coding upstream 29086 9049956 ~ 9050446 (-)
G30024 NA non-coding upstream 75851 9096721 ~ 9096984 (-)
G30041 NA non-coding upstream 136575 9157445 ~ 9157660 (-)
G29746 NA other downstream 648596 8354498 ~ 8358127 (-)
G29656 NA other downstream 1041223 7964364 ~ 7965500 (-)
G29388 NA other downstream 2374816 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 2461151 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 3379209 5616644 ~ 5628289 (-)
G30316 NA other upstream 357067 9377937 ~ 9406921 (-)
G31203 NA other upstream 1725567 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 2386595 11406957 ~ 11412907 (-)
G32150 NA other upstream 2755649 11776519 ~ 11780951 (-)
G32207 NA other upstream 3355298 12376168 ~ 12384780 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016422 si:dkey-181m9.8 coding NC_007113.7 CM002886.2 26692358 ~ 26720854 (-)