CI01000004_09329111_09337596


Basic Information

Item Value
gene id CI01000004_09329111_09337596
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9328986 ~ 9337596 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_09329111_09337596.mRNA
GCTCTTCAATCGGTTTCTATATTCCAAGCTAATTTAACAAGCAGTGAATCCCCAAAGACGTTATTCCAGGTAGGGGCAAATGGGGTTAATCTAGTCAGTAGGTCAAGAGCTTACTACCAGTCTGATGATTATGTCCCTAACCCAACACAGACTCTGCTGTCTGTAACATTAAACGATACTGCGCGGTTAATGACAAGATTCAAGGATAGCAAGAATGAAAAACGTAATATTTACAGGTTTAAGGAATACAGACAGAATGAACTCTGGCTGGTGGAGTTTTATGCTCCATGGTGCACATACTGTCACACATTTGAGCCAATATGGTATGAAGTCGGTGCAGAGCTGAAGAGTCTGGGCTCTCCTGTTAATGTCGGCAAGATTGATACCACACTGCACACAAGTATTGCTTCAGAGTTTAATATTCGTGGATATCCAACCATAAAACTGTTTAAAGGAGATCTGTCTTTTGACTACAAAGGGCCGAGGACAAAGGATGCTATTATTGAATTTACCAATAGAGTTTCAGGTCCTGTGCTAAGACCACTCTCTAGTGTTCAGTTGTTCCAGCATGTGATGAGTCGTCATGAACTTATCTTTGTTTACATTGGAGGGGAGTCGTTTCTTAAGGCAGTCACTCTGCAGGATGTTCCCGTTGTTGCTGTATTCAAAGATGGGACGTACTACCTCTACAATGAATTTGATGGAGATCTGTCTTCCTGGATAAATCGAGAACGTTTTCCCTCTTACTTCCAAATCGATAGCTTTAGTCTGTACCAGATGGGAGAACAAAGTAAACTTGTGGCATTGGCAGTAGTAGATGAGAAAAATCCATCTGAAGAAAGCATTCGCTACAAAACTCTGATGGAAAGGCTGTCTACTGAATACAGAGATCATTATAAAAGGGATTACCAGTTTGGTTATATGGATGGTAATGAATATATTAACGGTTTAATTATGGGTGTTCTGGATGGCAGTGCTACGCTACTTGGAGGAAATGGGTTTTTGCAGTGCACTAAGAGAATTCTCTATAAAGCGAAGTCTACTGTTGTGTTAATGTTCCAGACAGCTCCGGTCTTCTCCTGTTTTGTGGTTGGACTGCCTGTAGGTATAGTTGTAATGGTTATCTGGGGCACATGTACTGCTGTACCAGCAGATGATGAAAAACCTGAGGAAGGAGCTACAGCCAGTCCTGGGAAGAAGGCAATAGAACTGCAGCCTGACAGCACAGAAAAAACCTCAGAAGCAAAGAAAGAGGATTAACATGGACTGTTTATTTAGGATCATGTTAATCTGTAACATATAATGTTTTTCCCATTTTTATAAATTGTTTTCCCATGTGATTTTCTATATTGTGGAAATTGTGGTTGGTTTCTTTATCAAATAAA

Function

NR:

description
Thioredoxin-related transmembrane protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_09329111_09337596.mRNA True 1385 mRNA 0.40 15 9328986 9337596

Neighbor

gene id symbol gene type direction distance location
CI01000004_09324170_09327754 DSELA coding downstream 1232 9323546 ~ 9327754 (-)
CI01000004_09179343_09182737 NA coding downstream 145268 9177975 ~ 9183718 (-)
CI01000004_09159241_09169070 NA coding downstream 157269 9158475 ~ 9171717 (-)
CI01000004_09006723_09020870 NA coding downstream 308116 9006723 ~ 9020870 (-)
CI01000004_08958415_08969605 U2SURP coding downstream 359381 8958279 ~ 8969605 (-)
CI01000004_09367511_09370243 TOE1 coding upstream 29865 9367461 ~ 9370243 (-)
CI01000004_09425074_09426973 NA coding upstream 87371 9424967 ~ 9428395 (-)
CI01000004_09486618_09488654 UROD, DCUP coding upstream 148761 9486357 ~ 9488654 (-)
CI01000004_09490844_09498265 LYN coding upstream 152683 9490279 ~ 9498265 (-)
CI01000004_09503523_09520686 TGS1 coding upstream 164462 9502058 ~ 9521982 (-)
G30280 NA non-coding downstream 23362 9305390 ~ 9305624 (-)
G30276 NA non-coding downstream 49056 9279720 ~ 9279930 (-)
G30272 NA non-coding downstream 54234 9274499 ~ 9274752 (-)
G30108 NA non-coding downstream 66151 9262628 ~ 9262835 (-)
G30101 NA non-coding downstream 71670 9257050 ~ 9257316 (-)
G30316 NA non-coding upstream 40341 9377937 ~ 9406921 (-)
G30369 NA non-coding upstream 320328 9657924 ~ 9658522 (-)
G30370 NA non-coding upstream 321152 9658748 ~ 9659060 (-)
G30376 NA non-coding upstream 351295 9688891 ~ 9689116 (-)
G30377 NA non-coding upstream 351678 9689274 ~ 9689506 (-)
G29746 NA other downstream 970859 8354498 ~ 8358127 (-)
G29656 NA other downstream 1363486 7964364 ~ 7965500 (-)
G29388 NA other downstream 2697079 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 2783414 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 3701472 5616644 ~ 5628289 (-)
G31203 NA other upstream 1408841 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 2069869 11406957 ~ 11412907 (-)
G32150 NA other upstream 2438923 11776519 ~ 11780951 (-)
G32207 NA other upstream 3038572 12376168 ~ 12384780 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location