prrg1 (prrg1,LOC107585847,LOC107657931,LOC107700656,LOC107750596,LOC107717574)


Basic Information

Item Value
gene id prrg1
gene name prrg1,LOC107585847,LOC107657931,LOC107700656,LOC107750596,LOC107717574
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9294387 ~ 9299803 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246886.1
CGTCAGGGGCGTAGTATGTACGTTTCCATCGAGTTAATTCTGACCCCTGACTGCGCATGCGCCAAATCAGGACATTGGGACTAACGGTGAACGCGTTTGGGTGGAACGGGTCCAGTTTCCCTCTTTGAAAAGCTGCAGGAATAATGGGAGCCGTGTTCCTGCCAGCAGATGCCGCGCACTCTGTGCTGCGGAGGCTCCCGAGAGCAAACTTCTTCTTGGAGGAGATGAAACAAGGGAACATCCAGCGAGAATGCAGGGAGGAAATCTGCAATTATGAAGAAGCCAGGGAAGCATTTGAGAATGATGAGAAAACGAGGCGATTCTGGGAGGAGTACCAGCGGGAAAGCAGCCCTAGGCCCGGAGGACTGGAGTCCATCGCCGGTGGCGTTCATTCCCTGTACCTGATCTTACCCCTGCTGCTAGTTTTGCTGCTCATCGCTGCGGTTTCCATCACAGTTTGGAGATGCCACTCGCGCAAAAGATCCCAGCAGAGTCCTGCCATTGGACGTCCACAAAGAGACACAACCCTATCAGTGGTGTCAATGGACCAGTGGGGTCGGGACTACCATCCTGACATCAGTCCTCACTCAGAGATCAGTGCCCACAGTAGCCCCGCCTACCCAGGCGCTGATCTCACACCTGGCCGGGGCAGTCGGGGAGACCCGCCCCCTTCGTACGAGGAAGCTGTGGGGCACACGGATATACAGATTGAAGCAGAGCCTCCACCACAATACGAAGACATCATCAGTAACCACGGTAACACTGTTATCATCTCCCAGGGAAAGTGACAGATCTTCCAGGCATGTTATCCAGCCTCGTAGGGATGCATTTTGATACCAATACTGTAAACCCTGTCATTCCTTACTCGCTGTGTCTCTCTTCTCTTTGATAGCTGATGTTTTTGCGGGATGTGAACATGCTTTGGCTGTTTATTTTGAAGTactagaagtatttttttacaacttCACTACTACAATGACAGGCTTTTCAACTCCAGCACTAGCATAATTGCTAAACTTCTTTACTTAATGTGAAGAGCAAACAACTTATGCAATAACATTATTCTTAGTACCGGTACATTGTTAAATATTGAACTGCTTTGATTTCAGAGATGTGCTTGGAACTCATAACAGCATGAATCCCAATCCAAGCTCCAATCCAATGACAAAGTACTGTAAAATCATGAGCCATTCTTCCAACTTAGTAAGTCCTATGAGTGACACCTATAATCTTGAACTGAACATTTGGTCAGTTGTGGCATCTCATGGAAGAGATAAAacatataattgtaaataatgagTTTCAGTGGAAAagaaatgcacaatattttcaGGAAGTTgtcaattttaatgtttacagaCATTCTGTACTTAAAGGTTCATTGTACACTTTATCAATAGCCATCTAAGCTTACACTATCTCTATTGAAATGCATAGATGTCACTATGCACTGGACTCACAGCCTCaatgaaatattgatattgGGTTGAATTTTCCTTTCCACTATGTGAGGTTCTAAACACTGTGTGTAAGATTTGGTTAGCATGTTGGAAACGGTTCAGCTGAATGGAAAACCAGTGTGAATTTGCTGATAAAATATATTGCTGGTAGCATTGACCAAACTAATTAAATCCTGTTTTTATGTAGCATCTGTTGGTAATGCTGAAACAGACTCAGTGGGTACTCAAGTCAACGTGTGAGGTTTTGCAGTTCGGAAAATACAATACTTACAATAGTTcaactcaaaaatgtaaatttaatgaatatttactTGCCTTCAGTCTATCCAATATGTAGATTTGCAAAAATATAGcatatcacttgctcactaatAGATTCTCtacagcgaatgggtgccgtcaaacaGCTGACGAgaaacatcacaacaatccaCAAGCAAGCTACACGACTAGTCCATCAGCTAACATTGTGCGCATTGAAAAGCTGCAtgcttgtaaacaaaaaaatccatcattaagacattttaacgtcaaaccattgcttctggccaaaattcCAGTTAAGAATGTTGACAGCACCCATTCGATGCAGAAGACCCACTAATGACCAGGTgatgtaatgctgcatttctccaaatctgttgcTACAGCGAACCAAACTGTTCTGTGGCTTGTGAGTACAtcttcagcaaattttcattttggggcgaACTATTCCTTGACCTGTTGTATTGTGCAAGTGCGGTTTGAGGTTTCTCATTCCAGTCGAGCCACAGTACGTTCAGTGGCAAAACATGGTAGACTAAATGGTCTATGCAACAGTGATTTCTTTTCTCTCCATAGCTATGGAGCAATTTACATGGTCACAGCCTTGTGAAATATATTCTTATTGTGGCCAAGGACTAAACGGGCATATTAAGCATCCCAAGGTGGGAATTCTCAGACAAGCAAGATGAATTGTCCATTGTGGAGGTAATTTATAAGGAACAAGAAGCATGCTTTTTGTGTGCAGCTGAGTTTTACTGTGTGCAGActcttttagatttattttaggGTAAATAACTTGTGTGTTGTTTCTCTGACCTACTAGAGAAtgtcaaaaaataacaattatgaCTACCTTTACCATGCTGCTTGTTTTGAAGTGAATTCCAGGGcattcaaaatatgttaaagGCTGTTTTTACCCATGGTTCGTTTGTTTGAAACAGTAGTTTGATTCAAACCCTTTGCTTTCACCAATGTAGTTTGGAGtcagaaatgcagttttgttttcatttccgTTACAAGTGTTAGTAACAAAAAGAGTGTGCTACAAAGCATAACTCTCCTCCCACGACAAACTACATTTTGCTAACACTTTAAACTGACacctttttattatatcataaaGTTATTCATAATGTAGATTGtaaagcattatatatttttttataaataattgtaaccaaagttaaaatgcattataatatttgcaGATTCCTTGTTAcatctaaaatagttttttttttaaatcacgttttaatattttccaaaaaatgtaaCGATGAATATGCAGTTGTGGTTACAATTATTCCTGAGATcgatttttatgtatatatattaatttcagGTAAAGTGTCACCAAttgttttggggggtttttttctctcctaAAATGTCTCTTCAGactgatttaaaaaagacaaaaaaaaccaaactatTTTGGAAATTTGACACTAACTATCAGGTTGGGCTTGTTCGTGTGTTTAACAGCAAGTGGACACCGTTTATCTCATACCATTTATTTCTGGTTTCTTAGTTTTCACCTCAGGCCCAGCTCCActtaacaaaaaacaagaacTTAAGATTAGGATCAAATTATGGGAACAAGCTGTTCTAGTCTAGTCCTAAAATATTAGAAGGAAATATTCAGTATTAAATATcaggaaagtgtgtgtgtgtgtgtgtctgtgggtgggtgggtgtgtaTTAAGGAAAGAGAACATAATGGGGAAAAGTCAACACATTTGTACCTATGAgtgaatgcactttttttgggcTCTTGACTGCTCGGTGTAAAGAAATATTAGTTGATGTGTAACGGAATATTAATTGATGTGTACGATGTGATAAGTTACTAGAGAAAAAATGGCAAATGCTGTTTGGTATATCCTCTTGGCTTTCTAcagtttatattttcaattcatCAACAACATGCTTGGCTGACATGAATATGCAAGAAAATCCATCACCAGCACCCACTCAAGAAAGCTTTGTGAAAATTGAAACGTTCTCACTTTGCCTAAaatggtttgtgtttttaaagataatGTGAAATAAGACTACCGACATTTGAAATACAGTCTGAAGATGTTACAACTTTGACTGATGTTGCTGTACATGTGCAGGCTGATATTTCTGTGGTAGTTAAGAGTGATTGTGGTGGTGTTTATTGCTTAAGCCTTATTCAGAGatagaaaatgtgtgtgtgtgtatatatatatataaatgtactaagaacaaattaaattttttgtaatgat
>XM_043246887.1
TTTGGGTGGAACGGGTAAAcagGTCCAGTTTCCCTCTTTGAAAAGCTGCAGGAATAATGGGAGCCGTGTTCCTGCCAGCAGATGCCGCGCACTCTGTGCTGCGGAGGCTCCCGAGAGCAAACTTCTTCTTGGAGGAGATGAAACAAGGGAACATCCAGCGAGAATGCAGGGAGGAAATCTGCAATTATGAAGAAGCCAGGGAAGCATTTGAGAATGATGAGAAAACGAGGCGATTCTGGGAGGAGTACCAGCGGGAAAGCAGCCCTAGGCCCGGAGGACTGGAGTCCATCGCCGGTGGCGTTCATTCCCTGTACCTGATCTTACCCCTGCTGCTAGTTTTGCTGCTCATCGCTGCGGTTTCCATCACAGTTTGGAGATGCCACTCGCGCAAAAGATCCCAGCAGAGTCCTGCCATTGGACGTCCACAAAGAGACACAACCCTATCAGTGGTGTCAATGGACCAGTGGGGTCGGGACTACCATCCTGACATCAGTCCTCACTCAGAGATCAGTGCCCACAGTAGCCCCGCCTACCCAGGCGCTGATCTCACACCTGGCCGGGGCAGTCGGGGAGACCCGCCCCCTTCGTACGAGGAAGCTGTGGGGCACACGGATATACAGATTGAAGCAGAGCCTCCACCACAATACGAAGACATCATCAGTAACCACGGTAACACTGTTATCATCTCCCAGGGAAAGTGACAGATCTTCCAGGCATGTTATCCAGCCTCGTAGGGATGCATTTTGATACCAATACTGTAAACCCTGTCATTCCTTACTCGCTGTGTCTCTCTTCTCTTTGATAGCTGATGTTTTTGCGGGATGTGAACATGCTTTGGCTGTTTATTTTGAAGTactagaagtatttttttacaacttCACTACTACAATGACAGGCTTTTCAACTCCAGCACTAGCATAATTGCTAAACTTCTTTACTTAATGTGAAGAGCAAACAACTTATGCAATAACATTATTCTTAGTACCGGTACATTGTTAAATATTGAACTGCTTTGATTTCAGAGATGTGCTTGGAACTCATAACAGCATGAATCCCAATCCAAGCTCCAATCCAATGACAAAGTACTGTAAAATCATGAGCCATTCTTCCAACTTAGTAAGTCCTATGAGTGACACCTATAATCTTGAACTGAACATTTGGTCAGTTGTGGCATCTCATGGAAGAGATAAAacatataattgtaaataatgagTTTCAGTGGAAAagaaatgcacaatattttcaGGAAGTTgtcaattttaatgtttacagaCATTCTGTACTTAAAGGTTCATTGTACACTTTATCAATAGCCATCTAAGCTTACACTATCTCTATTGAAATGCATAGATGTCACTATGCACTGGACTCACAGCCTCaatgaaatattgatattgGGTTGAATTTTCCTTTCCACTATGTGAGGTTCTAAACACTGTGTGTAAGATTTGGTTAGCATGTTGGAAACGGTTCAGCTGAATGGAAAACCAGTGTGAATTTGCTGATAAAATATATTGCTGGTAGCATTGACCAAACTAATTAAATCCTGTTTTTATGTAGCATCTGTTGGTAATGCTGAAACAGACTCAGTGGGTACTCAAGTCAACGTGTGAGGTTTTGCAGTTCGGAAAATACAATACTTACAATAGTTcaactcaaaaatgtaaatttaatgaatatttactTGCCTTCAGTCTATCCAATATGTAGATTTGCAAAAATATAGcatatcacttgctcactaatAGATTCTCtacagcgaatgggtgccgtcaaacaGCTGACGAgaaacatcacaacaatccaCAAGCAAGCTACACGACTAGTCCATCAGCTAACATTGTGCGCATTGAAAAGCTGCAtgcttgtaaacaaaaaaatccatcattaagacattttaacgtcaaaccattgcttctggccaaaattcCAGTTAAGAATGTTGACAGCACCCATTCGATGCAGAAGACCCACTAATGACCAGGTgatgtaatgctgcatttctccaaatctgttgcTACAGCGAACCAAACTGTTCTGTGGCTTGTGAGTACAtcttcagcaaattttcattttggggcgaACTATTCCTTGACCTGTTGTATTGTGCAAGTGCGGTTTGAGGTTTCTCATTCCAGTCGAGCCACAGTACGTTCAGTGGCAAAACATGGTAGACTAAATGGTCTATGCAACAGTGATTTCTTTTCTCTCCATAGCTATGGAGCAATTTACATGGTCACAGCCTTGTGAAATATATTCTTATTGTGGCCAAGGACTAAACGGGCATATTAAGCATCCCAAGGTGGGAATTCTCAGACAAGCAAGATGAATTGTCCATTGTGGAGGTAATTTATAAGGAACAAGAAGCATGCTTTTTGTGTGCAGCTGAGTTTTACTGTGTGCAGActcttttagatttattttaggGTAAATAACTTGTGTGTTGTTTCTCTGACCTACTAGAGAAtgtcaaaaaataacaattatgaCTACCTTTACCATGCTGCTTGTTTTGAAGTGAATTCCAGGGcattcaaaatatgttaaagGCTGTTTTTACCCATGGTTCGTTTGTTTGAAACAGTAGTTTGATTCAAACCCTTTGCTTTCACCAATGTAGTTTGGAGtcagaaatgcagttttgttttcatttccgTTACAAGTGTTAGTAACAAAAAGAGTGTGCTACAAAGCATAACTCTCCTCCCACGACAAACTACATTTTGCTAACACTTTAAACTGACacctttttattatatcataaaGTTATTCATAATGTAGATTGtaaagcattatatatttttttataaataattgtaaccaaagttaaaatgcattataatatttgcaGATTCCTTGTTAcatctaaaatagttttttttttaaatcacgttttaatattttccaaaaaatgtaaCGATGAATATGCAGTTGTGGTTACAATTATTCCTGAGATcgatttttatgtatatatattaatttcagGTAAAGTGTCACCAAttgttttggggggtttttttctctcctaAAATGTCTCTTCAGactgatttaaaaaagacaaaaaaaaccaaactatTTTGGAAATTTGACACTAACTATCAGGTTGGGCTTGTTCGTGTGTTTAACAGCAAGTGGACACCGTTTATCTCATACCATTTATTTCTGGTTTCTTAGTTTTCACCTCAGGCCCAGCTCCActtaacaaaaaacaagaacTTAAGATTAGGATCAAATTATGGGAACAAGCTGTTCTAGTCTAGTCCTAAAATATTAGAAGGAAATATTCAGTATTAAATATcaggaaagtgtgtgtgtgtgtgtgtctgtgggtgggtgggtgtgtaTTAAGGAAAGAGAACATAATGGGGAAAAGTCAACACATTTGTACCTATGAgtgaatgcactttttttgggcTCTTGACTGCTCGGTGTAAAGAAATATTAGTTGATGTGTAACGGAATATTAATTGATGTGTACGATGTGATAAGTTACTAGAGAAAAAATGGCAAATGCTGTTTGGTATATCCTCTTGGCTTTCTAcagtttatattttcaattcatCAACAACATGCTTGGCTGACATGAATATGCAAGAAAATCCATCACCAGCACCCACTCAAGAAAGCTTTGTGAAAATTGAAACGTTCTCACTTTGCCTAAaatggtttgtgtttttaaagataatGTGAAATAAGACTACCGACATTTGAAATACAGTCTGAAGATGTTACAACTTTGACTGATGTTGCTGTACATGTGCAGGCTGATATTTCTGTGGTAGTTAAGAGTGATTGTGGTGGTGTTTATTGCTTAAGCCTTATTCAGAGatagaaaatgtgtgtgtgtgtatatatatatataaatgtactaagaacaaattaaattttttgtaatgat

Function

symbol description
prrg1 Predicted to enable calcium ion binding activity. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human PRRG1 (proline rich and Gla domain 1).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246886.1 True 3985 mRNA 0.39 4 9294387 9299803
XM_043246887.1 False 3898 mRNA 0.39 4 9294482 9299803

Neighbor

gene id symbol gene type direction distance location
tab3 tab3,LOC107657918,LOC107699984,LOC107750565,LOC107717572 coding upstream 9594 9277845 ~ 9284793 (+)
alkal1 fam150a,LOC107750531,LOC107548541,LOC107699942,LOC107657934 coding upstream 43865 9239131 ~ 9250522 (+)
LOC122350046 LOC107657916,LOC107585827,LOC107699878,LOC100333406,LOC107710926 coding upstream 184554 9039599 ~ 9109833 (+)
ssbp3b ssbp3b,LOC107657912,LOC107710925,LOC107585824,LOC107699856,LOC108439398 coding upstream 265304 9018753 ~ 9029083 (+)
lrriq3 LOC107585823,LOC107657910,LOC107710924 coding upstream 284880 9006129 ~ 9009507 (+)
ccdc181 si:ch211-232d19.4,LOC107717568,LOC107657920,LOC107585925,LOC107751078,LOC107700684,LOC107549898 coding downstream 5902 9305705 ~ 9311270 (+)
fsd1 fsd1,LOC107657921,LOC107717569,LOC107585848,LOC107750605,LOC107700007,LOC107548631 coding downstream 11715 9311518 ~ 9321215 (+)
mpnd mpnd,LOC107717566,LOC107750615,LOC106591182 coding downstream 30522 9330325 ~ 9335661 (+)
mpeg1.2 mpeg1.2,LOC107585926,LOC107676957,LOC107657857,LOC107717542 coding downstream 257508 9557311 ~ 9561284 (+)
npl npl,LOC107676614,LOC107717554,LOC107750814,LOC107700206,LOC107548793 coding downstream 319366 9619169 ~ 9624330 (+)
G62381 NA non-coding upstream 30097 9262927 ~ 9264290 (+)
G62314 obscna,LOC107657853,LOC107758262,LOC107585905 non-coding upstream 103067 9190055 ~ 9191320 (+)
G62231 dio1,LOC107700640 non-coding upstream 256519 9032519 ~ 9037868 (+)
G62216 NA non-coding upstream 319718 8974398 ~ 8974669 (+)
G62215 NA non-coding upstream 320042 8974097 ~ 8974345 (+)
G62399 NA non-coding downstream 26276 9326079 ~ 9327293 (+)
G62401 NA non-coding downstream 53791 9353594 ~ 9359274 (+)
G62414 LOC107548667,LOC107657922,LOC107750669,LOC107585851 non-coding downstream 59614 9359417 ~ 9360034 (+)
G62426 NA non-coding downstream 195757 9495560 ~ 9522084 (+)
G62445 NA non-coding downstream 231901 9531704 ~ 9532337 (+)
smim15 smim15,LOC107700545 other upstream 816056 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 1765301 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 2444676 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 2527844 6756105 ~ 6766543 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 4064779 5226952 ~ 5229608 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 404678 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 1049111 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 1131999 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 1236340 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 1892921 11192724 ~ 11197803 (+)

Expression


Co-expression Network