tab3 (tab3,LOC107657918,LOC107699984,LOC107750565,LOC107717572)


Basic Information

Item Value
gene id tab3
gene name tab3,LOC107657918,LOC107699984,LOC107750565,LOC107717572
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9277845 ~ 9284793 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247702.1
GGAACATCAGAGGAAGAGAAATAGGCGTAAGTGAAGACGACAATTTTATTGCGACTGTGCTAACCGCTGTGATCCCTGAAGAACCCCGGTGAATCGTTGTCATTTCCGATCACCTCGGCAGTCCGGCGACACACCCCCTGTGAAAAGCCTCGTTTGGACGGTCAATGGCCGTGAGGCTCCGGCGCACGGGGATGAGAGGAGAGCAGGTGCTGCGCTCCTGGCTGCGGACTCAGTGACTCTCTCTTTGGGCTCAGGATGGCGCAGGGAGGGCCTCAGTTGGACTATCACATACTGCAGGACCTCAAGCAGCGCTTCCCAGAGATTCCAGAGAAAGTAGTGTCTCAGTGCCTTCTTCAGAACAACAATAACCTGGACCTCTGCTGCCATCTGCTGGCTCAGGAGAGTAATAGATACCTGTATGAAGAGTACCACAGCCCAGATGACTTGCAACTAAACCGGAACCAGATGCTGCGCATTAGTGTGGGTTACCATGCTAATGAAGGGGTTAAAAATAATGCTGGGAGCCGAGCTTTGGTCCACAGTTCCAGTGACGGGCATATCGAGCATCCTAGAAGCGGTTTCCCCGAGCCGCTTTCTGCCCCAGCTACTATGGCGCCATCAACTGGCTTCAACCCCTTCTTTATGAACGATCAAGGACGCTCGAATGTCCCCACCCCTCCACCGAGCATTCAGGGCATGTCGCCCACATACCATCCTGTCCCACGTTACATGCCTCCCATAACAGTTACCCTCTCCCAGAACATCCCCTCTGCCCCACAAGCGTTGCAGATCCCCCCTGGTGCCTATTGTAACAGCGGGAACACCGTGTACATGCGTCCCTCACCGTCTCAAAGTCCTCAGCCCACTCCCTGGTCCACATCTGGGACATCTGTGTACCAACAGTCTCCTTACGTCACTCCAACATACCCATCACCGTACAGTTCTCCCCAACATCAGGTCCAGCAGACGCCCCAGGTGTTTCTGCCAATAAGTCCCCCCACTCTCCCTGGGCTGTCCTACCAGCAGCCGCCAGTTTCCCACAGGCCTTTCATGTCCTCCAAAGGCCCTATGAAGAACCAGATAGAGATCACACTGGAGGGACAACGACCACGGAGCAACTCCCCTGTACATGCTCCACAAGGGACGCTTTATATGGCCAACAGCCCTTCCCCGAGCTCCCCGTCCCGGGCCATTAGTATGACAGGACCCCCCGGGGCCTCCATTCATCAAGGAATTTATGTCCACCAGGGTGTGGGAAGGCCCCGGCCCGCATCCTCTCCTCAACCGGCCACCTCTGCATTCATCAAGATCAAAGTATCTCCTGGACAAGCGCAGCGTTCCTCGAGTTCTCCACCAGTCGAGACTGAATCTCTCCTCAATATAGTGGACCAGGGTGAGCGCCACGGTGCTCCTCCTCCGATCCTGCCCATCTCTGCCCTGCCAGGGAACATCTCCAGTCACATCAACCGCATGCCTAGACGATCCAGCTCCGGCTCGGATGACTATGCATATACTCAAGCGCTGCTCCTCCACCAGCGTGCCCGAATGGAGCGTTTGATGAAAGAACTCATGCTGGAGCGTCAGAAACTAGAGCAGTTGAAGGCGGAAGTGAATGAAATGGAATTTGATGCCCTGCAGAGACGCTTCAGACGGGTGAACAGCACCAGCCTGATCCCTCGGCCTGAGGATATGACCAGAATTCGGTCACAAAACAGACAGCTCCAGATTGACATTGATTGCACCTTGAAGGAGACAGACCTGCTGCAGTCCAGAGgcAAGTTTGACGTGAGAACCATGAACAACTTTTATGATAATATTCAGCCTGGCCCTGTTGTACCTCCAAGAGTTAAGCCTCCGGTCGTACAAAGGGACGAGGATTTTGAAGGCGCTCAGTGGAACTGTGAAAGCTGCACTTTTCTTAACCACCCCGCGCTGCACCGCTGCGAACAGTGTGAGATGCCACGCAACACTTGAGCCGGCTTCACTGCGACCCCTTCCTACAGGCCATGAACCTCACTCTTCCTATTAATCTTCTGTTCCACCATGCAACGTTCAAGTCTCGCCTACCGTTTGCCGATTTCTATCCCTTGTGCCCTCAGCTTCACCCAGCAATAACTGAGCCATACCCCACAGAAGAAGAGACAACTACTCTAGTAAAATATTATCCAATCAGAACCACCCTGTGTTACCTCTTGAGGAGCTTCCTGCacttgtatttcttttttttttctactgaaaGATGCTTTAAAAGAGGAAGGAGGGTGATTTTGACTTCACAGAAACAAGGGATTGATTGATTGGCGCTGGAGTGGATCGAGAATCCGTGGTTTTAGGAGAGGGTGGAGCTTCCAAATGTTGAAGAGGTGTGGTTTACCAAGCTACCATTCCAAGCAGAATAAGACTGCTGcgtttacaaaagaaaaagccCTGAACAATCCCGCTTATGTGGCTTTTCTCACAACATGATCAGTGTATTGAGAAGCAGGGGctgaataattttaatgtagACTTTACACTGTATGTGCTCACTATGAGCTCTTCTCATGAATGAAGAACACTACAAGACCTGCATATGAACCTATACCTGGTACTTTTATGCATATGCCACACTGTATTCTGTGTTTAAGATGTTGATTTCCTGTGCAAATGCCTCAAGTTGCTGTACTTAATAAAGGATCTGATTCTATGTGACTATA

Function

symbol description
tab3 Predicted to enable kinase activity; metal ion binding activity; and ubiquitin binding activity. Predicted to be involved in positive regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to act upstream of or within phosphorylation. Orthologous to human TAB3 (TGF-beta activated kinase 1 (MAP3K7) binding protein 3).

NR:

description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0008270 zinc ion binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K12793 MAP3K7IP3, TAB3; TAK1-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247702.1 True 2696 mRNA 0.51 7 9277845 9284793

Neighbor

gene id symbol gene type direction distance location
alkal1 fam150a,LOC107750531,LOC107548541,LOC107699942,LOC107657934 coding upstream 27323 9239131 ~ 9250522 (+)
LOC122350046 LOC107657916,LOC107585827,LOC107699878,LOC100333406,LOC107710926 coding upstream 168012 9039599 ~ 9109833 (+)
ssbp3b ssbp3b,LOC107657912,LOC107710925,LOC107585824,LOC107699856,LOC108439398 coding upstream 248762 9018753 ~ 9029083 (+)
lrriq3 LOC107585823,LOC107657910,LOC107710924 coding upstream 268338 9006129 ~ 9009507 (+)
LOC122350485 NA coding upstream 286637 8987654 ~ 8991208 (+)
prrg1 prrg1,LOC107585847,LOC107657931,LOC107700656,LOC107750596,LOC107717574 coding downstream 9594 9294387 ~ 9299803 (+)
ccdc181 si:ch211-232d19.4,LOC107717568,LOC107657920,LOC107585925,LOC107751078,LOC107700684,LOC107549898 coding downstream 20912 9305705 ~ 9311270 (+)
fsd1 fsd1,LOC107657921,LOC107717569,LOC107585848,LOC107750605,LOC107700007,LOC107548631 coding downstream 26725 9311518 ~ 9321215 (+)
mpnd mpnd,LOC107717566,LOC107750615,LOC106591182 coding downstream 45532 9330325 ~ 9335661 (+)
mpeg1.2 mpeg1.2,LOC107585926,LOC107676957,LOC107657857,LOC107717542 coding downstream 272518 9557311 ~ 9561284 (+)
G62381 NA non-coding upstream 13555 9262927 ~ 9264290 (+)
G62314 obscna,LOC107657853,LOC107758262,LOC107585905 non-coding upstream 86525 9190055 ~ 9191320 (+)
G62231 dio1,LOC107700640 non-coding upstream 239977 9032519 ~ 9037868 (+)
G62216 NA non-coding upstream 303176 8974398 ~ 8974669 (+)
G62215 NA non-coding upstream 303500 8974097 ~ 8974345 (+)
G62399 NA non-coding downstream 41286 9326079 ~ 9327293 (+)
G62401 NA non-coding downstream 68801 9353594 ~ 9359274 (+)
G62414 LOC107548667,LOC107657922,LOC107750669,LOC107585851 non-coding downstream 74624 9359417 ~ 9360034 (+)
G62426 NA non-coding downstream 210767 9495560 ~ 9522084 (+)
G62445 NA non-coding downstream 246911 9531704 ~ 9532337 (+)
smim15 smim15,LOC107700545 other upstream 799514 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 1748759 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 2428134 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 2511302 6756105 ~ 6766543 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other upstream 4048237 5226952 ~ 5229608 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other downstream 419688 9704481 ~ 9705639 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 1064121 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 1147009 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 1251350 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 1907931 11192724 ~ 11197803 (+)

Expression


Co-expression Network