CI01000005_04624198_04638644


Basic Information

Item Value
gene id CI01000005_04624198_04638644
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 4623996 ~ 4638644 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_04624198_04638644.mRNA
GTTCACAGAGTTCCTGGAGCCTTTTGAGAGAGTTATCCAACCTGAAGAACTATGGCTCTACAAGAACCCTCTGGTGGAATCTGACCACATCCCAAAGAGAGTCATGTTTGCAATTTCATTCCTGACCCCGTTAGCTGTGATATTCGTGGTGAAGATTATACAGAGGACAGACAAGACAGAAATTAAAGAGGCTTGTTTAGATACCACACCACCACAGGAAGTGCTGGTTATATCACTTATGCCAGAAGCCAGTGACAACAGGCCCCAGAGCTCTATGCTCCAATACTTACCTTATCCCCAGTTAGCAGGGAAACTCCAATACAGCGGTATCTCTCGCACTAGCTTTGAATGGCGTCTTCACAAATACCATCAAGTTGATAGTTGGCAGAGTTATTCGAGTTACTCGCAAGGGCTTTTGTACTCTATTGCTTTGAACACAACCCAGGTTTTTGATGCAGGTTGCCTGGCTGGGTCCAGTCTGTCATCGCAAGAGGATCACGATGGATGCCTCTGGGAGTGGGAGCTGGATCCAGTCCGCTGCCCTGTTGGTCCAGTGGAAACATTCTTTGGTTTCCCACTTTATGTGTGGAGATGGCTACAGCCTACACATATTCTTTCATGTGATTTGTCCATGGTCCTTCAGGGACTGACGGACTATTATTTTGGGATTGACGGACTCATGGAGTTTTTCCCAAGATTGTCTCTTAAGATGGTCTTACTATTGGCTCTATCCTCTCTTAAGAGGATCAGAGACTTACAGGCCCAATCAGTGAGCCCTTCCAGTTTGGATTTCATTCCTGGCTTGGTGAAGATCCCTCTTATGGGGCTCATGAATTGACTTTGCCTCTGGGCATTCATGCAAACTCTACTAAGAGTGTAACTTCTTCCCAAGTATTGTTTAGAGCAGCTTCCTTGGAGGATATTTGTGTTGCGATAGACCCCTCTTAATATTGGTTTGACCCCTGGCTCCCGGGTTTTATCTGCTTGAGTGGGGCTCAGATTTGTGTTTGTCAGTCTGTGCAGGGTTCACGGCTGATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_04624198_04638644.mRNA True 1040 mRNA 0.46 7 4623996 4638644

Neighbor

gene id symbol gene type direction distance location
CI01000005_04443111_04445092 NA coding downstream 178904 4443053 ~ 4445092 (-)
CI01000005_04401277_04428207 NA coding downstream 195789 4401248 ~ 4428207 (-)
CI01000005_04332499_04357527 XPO5 coding downstream 265139 4332490 ~ 4358857 (-)
CI01000005_04296779_04299727 NA coding downstream 324211 4296209 ~ 4299810 (-)
CI01000005_04161239_04162612 NA coding downstream 460750 4160972 ~ 4163246 (-)
CI01000005_04731666_04732248 LHB coding upstream 92944 4731588 ~ 4732248 (-)
CI01000005_04738995_04739378 NA coding upstream 99975 4738619 ~ 4739378 (-)
CI01000005_04751377_04754904 NA coding upstream 111853 4750497 ~ 4754904 (-)
CI01000005_04758130_04802713 ARFGEF3 coding upstream 119423 4758067 ~ 4802713 (-)
CI01000005_04829696_04837047 PSMB1 coding upstream 190954 4829598 ~ 4837232 (-)
G38729 NA non-coding downstream 71966 4551765 ~ 4552030 (-)
G38725 NA non-coding downstream 75152 4548601 ~ 4548844 (-)
G38724 NA non-coding downstream 75771 4547796 ~ 4548225 (-)
G38721 NA non-coding downstream 80187 4543337 ~ 4543809 (-)
G38719 NA non-coding downstream 81823 4541902 ~ 4542173 (-)
G38756 NA non-coding upstream 19174 4657818 ~ 4668634 (-)
G38760 NA non-coding upstream 59783 4698427 ~ 4705877 (-)
G38711 NA non-coding upstream 173989 4812633 ~ 4815375 (-)
G38706 NA non-coding upstream 208281 4846925 ~ 4895140 (-)
G38813 NA non-coding upstream 302693 4941337 ~ 4941717 (-)
G38415 NA other downstream 222886 4381238 ~ 4401110 (-)
G38510 NA other downstream 417788 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 2734720 1883222 ~ 1899867 (-)
G36628 NA other downstream 2959717 1663267 ~ 1664279 (-)
G36049 NA other downstream 3580324 1021295 ~ 1043672 (-)
G39515 NA other upstream 1195148 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 1842045 6481355 ~ 6483265 (-)
G40487 NA other upstream 2557151 7195795 ~ 7196428 (-)
G40540 NA other upstream 2887577 7526221 ~ 7532148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location