CI01000005_04738995_04739378


Basic Information

Item Value
gene id CI01000005_04738995_04739378
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 4738619 ~ 4739378 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_04738995_04739378.mRNA
GGTTACTGGAACGAGCTGGCTTCAAACAAGGTCGAGGAGAGAGCGGAGGTGACGCTCTGTGTTGTCATAATAACGGGCTCGTTGCTCTTCCTCATCGGAATTGCCTTGTTCGTTTACAAAAGATGTTTCAGTGTCAAAGAGAACACGACCAAAGTAATAACACTGGATTTTGACGACGCTAACGGCACAGCTGAATTCCTGTCCACTTTGGAGGAAGAAGACGGCGCTGAAAATGGGAATGACGGGGTTTTTCTGATGGTTTATCTACCGGCCCCATACGAGAAGACCCTCACGAAGATAGCGCGCGCCGCCAGCACTTCCAGCTCCCACAATGGCGTGGAGATTGTGGAATTAGACACAGAGAACTCCACTGTTCAAGAGTGATCATTTAAACCCCCCAATGTAAAGCACGTATCGATCCGCATAATGCATGAACACTAACAAAAAGTACACGGTATTATGGTATGGTAGTATCATTTTTTTCTATTAAGTACTTTGGAATCCCATGTAAAGGCGTGAATATGGTAATAATTCACTAACACTATACCAATGTACCACAGTGCTATCTAATACCATCACTTTACCATGGTACCAGCACAGCAGGGTTTGTAAGGAAGTAGTGCCAGCTTTGTTTTTGAATCTTTATGATCTATGAAACTACAAATAGCCTATGTATTAATCAAAATAGCACGATTTGCATTTTTATTAACTTCACCATGATGCAGTGATTTTGAATTCTAGTAGTATTGTATATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_04738995_04739378.mRNA True 760 mRNA 0.42 1 4738619 4739378

Neighbor

gene id symbol gene type direction distance location
CI01000005_04731666_04732248 LHB coding downstream 6371 4731588 ~ 4732248 (-)
CI01000005_04624198_04638644 NA coding downstream 99975 4623996 ~ 4638644 (-)
CI01000005_04443111_04445092 NA coding downstream 293527 4443053 ~ 4445092 (-)
CI01000005_04401277_04428207 NA coding downstream 310412 4401248 ~ 4428207 (-)
CI01000005_04332499_04357527 XPO5 coding downstream 379762 4332490 ~ 4358857 (-)
CI01000005_04751377_04754904 NA coding upstream 11119 4750497 ~ 4754904 (-)
CI01000005_04758130_04802713 ARFGEF3 coding upstream 18689 4758067 ~ 4802713 (-)
CI01000005_04829696_04837047 PSMB1 coding upstream 90220 4829598 ~ 4837232 (-)
CI01000005_04883863_04894229 TNFAIP3 coding upstream 142906 4882284 ~ 4894229 (-)
CI01000005_04970033_04970793 OLIG3 coding upstream 229993 4969371 ~ 4971018 (-)
G38760 NA non-coding downstream 32742 4698427 ~ 4705877 (-)
G38756 NA non-coding downstream 69985 4657818 ~ 4668634 (-)
G38729 NA non-coding downstream 186589 4551765 ~ 4552030 (-)
G38725 NA non-coding downstream 189775 4548601 ~ 4548844 (-)
G38724 NA non-coding downstream 190394 4547796 ~ 4548225 (-)
G38711 NA non-coding upstream 73255 4812633 ~ 4815375 (-)
G38706 NA non-coding upstream 107547 4846925 ~ 4895140 (-)
G38813 NA non-coding upstream 201959 4941337 ~ 4941717 (-)
G38815 NA non-coding upstream 202548 4941926 ~ 4942172 (-)
G38819 NA non-coding upstream 209346 4948724 ~ 4948956 (-)
G38415 NA other downstream 337509 4381238 ~ 4401110 (-)
G38510 NA other downstream 532411 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 2849343 1883222 ~ 1899867 (-)
G36628 NA other downstream 3074340 1663267 ~ 1664279 (-)
G36049 NA other downstream 3694947 1021295 ~ 1043672 (-)
G39515 NA other upstream 1094414 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 1741311 6481355 ~ 6483265 (-)
G40487 NA other upstream 2456417 7195795 ~ 7196428 (-)
G40540 NA other upstream 2786843 7526221 ~ 7532148 (-)

Expression


Co-expression Network