G37904


Basic Information

Item Value
gene id G37904
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3235412 ~ 3236020 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU42994
GCTTCTTCCCGGGTTAGTGACATCACTAACCCTAAAATTTACATAAACCCCGCCCCTGAGAACACACAACAAAGGGGGTGAAGCCATGTTGGGCTGCTTTAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTACCATGCCATCATTTTACACCGGACTGCTTCACAAACGAGGGCCAATCGACCCTTCGCCGGGAGTTTGATTGACAAGTGATCTAACCAATCATAACGCTGAATCCGCCATTTTGTCTGACAAAGCAGTCAGGAGTTAGAAGATTAACCTCGGTGGACTTGAACTTGAAAAATGGTGTGTACTGACGTCTTTCCGCGTTTGAAACAACATTCCTTCTCATGTTCATTCATGTTTATTTGATGCTATGAATTAACTAGTAGGAAGAGATGATCGGTTCATGAGCCGCTTGAGCTGAGGCACTACAGCAATCTGTCACGACACAAAACGGTTTTTATTGTTCGAATTTCTTTAAAAATTACACAATTTGAAAGCTGGGACTTTGTTTAATATCAGAAGTAACCTGCTCTGTCTTGTCTGTCGACGTGTTGTCAGTGTCCTCTTTGCTCCGAGATGTATTTTTCACTCTGTGTGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42994 True 609 lncRNA 0.39 1 3235412 3236020

Neighbor

gene id symbol gene type direction distance location
CI01000005_03175712_03183326 NA coding downstream 52086 3175582 ~ 3183326 (-)
CI01000005_03163226_03166158 MEA1 coding downstream 69254 3162118 ~ 3166158 (-)
CI01000005_03050086_03051694 TUBA3E, TUBA1C, BRAFLDRAFT_115374, TUBA1A, TUBA4, TUBA4L, TUBA1B, TUBA4A, TUBA1A.L coding downstream 183718 3050086 ~ 3051694 (-)
CI01000005_03044395_03046540 TUBA3E, TUBA3D, TUBA1C, TUBA4, TUBA4L, TUBA8L, TUBA4A, TUBA1A.L coding downstream 188608 3044363 ~ 3046804 (-)
CI01000005_02940731_02974087 SYNDIG1 coding downstream 261241 2940257 ~ 2974171 (-)
CI01000005_03384625_03397017 LRRC73 coding upstream 148330 3384350 ~ 3397017 (-)
CI01000005_03400313_03405169 NA coding upstream 164274 3400294 ~ 3405169 (-)
CI01000005_03412228_03417948 YIPF3, YIPF3.L coding upstream 175983 3412003 ~ 3418657 (-)
CI01000005_03439939_03442430 NA coding upstream 203919 3439939 ~ 3443193 (-)
CI01000005_03494256_03497235 QKI coding upstream 258057 3494077 ~ 3499017 (-)
G37867 NA non-coding downstream 90487 3117294 ~ 3144925 (-)
G37861 NA non-coding downstream 144157 3091032 ~ 3091255 (-)
G37815 NA non-coding downstream 223468 3009599 ~ 3011944 (-)
G37799 NA non-coding downstream 316762 2918298 ~ 2918650 (-)
G37906 NA non-coding upstream 7618 3243638 ~ 3243856 (-)
G37936 NA non-coding upstream 49120 3285140 ~ 3285803 (-)
G37908 NA non-coding upstream 87234 3323254 ~ 3427865 (-)
G37999 NA non-coding upstream 221914 3457934 ~ 3458204 (-)
G38001 NA non-coding upstream 223551 3459571 ~ 3459807 (-)
CI01000005_01883894_01899867 NA other downstream 1346136 1883222 ~ 1899867 (-)
G36628 NA other downstream 1571133 1663267 ~ 1664279 (-)
G36049 NA other downstream 2191740 1021295 ~ 1043672 (-)
G38510 NA other upstream 968825 4204845 ~ 4206208 (-)
G38415 NA other upstream 1145218 4381238 ~ 4401110 (-)
G39515 NA other upstream 2597772 5833792 ~ 5834539 (-)
CI01000005_06481721_06483251 NA other upstream 3244669 6481355 ~ 6483265 (-)
G40487 NA other upstream 3959775 7195795 ~ 7196428 (-)

Expression


Co-expression Network