G37297


Basic Information

Item Value
gene id G37297
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3516442 ~ 3518449 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU42333
GCGGGCCGTGTCAGTGATTAGCTGTCAGAGCGTAGGCATCCTCCTCATTGGAATTAAAGAGGTGCAATTAGGAGGAGGAGGAAGTCTCATACATCAAACTGGCTTTGAACTGAGGAGACGGCACACAGAGACTGAGAAAGAGAGAGAGAGCTCACCAAGACTCACTTTATCGTTGTGAAACTTTGATTGTTTAGCGCACACACACACACACACACACACACTTTCTTTCCTTCTCCAAAACACACATTCTTACCCGGTAACCCTGCAACTAGCCATCTCTCCATAACAATACAGCCCTCTTATCTCTATTCATATAAAAGGCAGCTTTGATCTCTCACAACATGCGAAAAAATGAGGACTGCAACAAAAAGGCTGGTCACAAAGTCAAAAACATGACGGGGGGAATTAAAAAAAAAGCATCAGAAAGAGAGAGCGAGTGAAAGTGCTCCTCAACATCACACAGAATTTTCTCATCCCACAGCAGAGCAGCTCCCACAGAGCATCTGCCTCTGTCCCAGACTGTCTGAAAAACAGATTTGAGTAATTTTGGCCTTTAAAAATGCATGTGTTCTTGTATTATTCATCTTCAGGCTGCATGCAAATTCTAAACATCGGCATGAGAAGGAGGATCTTCTCGTCTGAATGAAGAGCATTGTTAAGCATTAGTCAGAACTACCGACTAATGATCTGGTATTCTTCAGGAGTAATAAACCACTTGAACCACTTGATAATGCCGGGTTCTGTTACGATAGTCACTGTGTCAGATTATATGATTTTGACTCCTAAAATCTTGTGTCGTGGACAAGAAACATGTCAGACTACACGTTGCTACCCGACCATTCATCGCTTGCCCCGTAGCGTAAACAAACAATGGCTAGCAGCGTGTTTTGCTCTGTCTTGTCATCAGAAAATCCCAAAAGTGGACACATATCTGGATTGCATGGATATTTGGATTTCCTCCAAAGAGAACTAAGGTAACATATGTTTTATTTACCTTTTTTTTTTAAACTTTTTTTTTTTTTTTTTAACCTTTTTCACAGTAGTCCCTCGAGGAAACATCATAAACGCAGGAGTATTGTTGCCTTAGCTCCACAAACATTTCCTCCATTTTAAAATTCCTCCTAGCAGGAATGATATCACTGTCTCTCTTTCGTTTCGGCATGTTTGAAAGCATGTAGGAAGGCACTTCTGTGCTCCTATTGGCCAGTGTCACACATGTGACAGAACTCGTTGTGGATGAACAAAAAAATAAATAAATAAACATGCAAGTTTTTCTGTCGTGACGTTGTGAAGCATCGGTTGTCGTCCACTATGACACACTACACGAGCTGAAACGATCAAATCTTGCGTCCCGACGCCCACTGTCGTTTACAAATACCCACAACACCCTACGTCAATCAGATCATGGCAAAATCGGGCTAAAATCATGTAGTCTGAACCGGCATAAGAGACATGTTGAAAAAAATCACAAATGAGTTCCCTTTAACTTTTTCCCTGCCATTAATTTTCCAACTTTACGTGTTTTCACTATTACACAGTAGGGGGCACTATTATGCATCTTCTGAAAGAGGACTGAATCTCAGGGCTGTGAAGCTTTGGGGGTGTCATCTATGTTTTGATCATCGTTTTGAATCCAATCCAGACACAGTCTTTGACAAAAACGTGATTTTCTCAAAATGTTTTTTTAATGAAACTTACCCACAAATTATGTGTTGATAAAAAAAAGAATGCATGAAGCTAGAATAAAACATGTTTTTTTTTATTTAAAAGCACAAGCTCCGTCCTTTTTTTGATATATTGCATGTTCAGATATTCATACAACAAAATATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42333 True 1831 lncRNA 0.45 3 3516442 3518449

Neighbor

gene id symbol gene type direction distance location
CI01000005_03447497_03448897 NA coding upstream 66459 3447187 ~ 3449983 (+)
CI01000005_03423676_03430312 NCOA4 coding upstream 85961 3423676 ~ 3430481 (+)
CI01000005_03317813_03368502 TJAP1 coding upstream 147058 3316294 ~ 3369384 (+)
CI01000005_03167707_03171889 DNPH1 coding upstream 344422 3167707 ~ 3172020 (+)
CI01000005_03097346_03117235 ZNF318 coding upstream 399065 3096946 ~ 3117377 (+)
CI01000005_03521422_03522147 NA coding downstream 775 3519224 ~ 3522376 (+)
CI01000005_03600059_03605667 NA coding downstream 81125 3599574 ~ 3605975 (+)
CI01000005_03782413_03784445 NA coding downstream 263964 3782413 ~ 3784819 (+)
CI01000005_03804929_03868048 NA coding downstream 286436 3804885 ~ 3868281 (+)
CI01000005_03886705_03918267 NA coding downstream 365916 3884365 ~ 3918454 (+)
G37024 NA non-coding upstream 8429 3472916 ~ 3508013 (+)
G37284 NA non-coding upstream 18317 3495681 ~ 3498125 (+)
G37013 NA non-coding upstream 26141 3485629 ~ 3490301 (+)
G37282 NA non-coding upstream 36738 3477220 ~ 3479704 (+)
G37276 NA non-coding upstream 62830 3453220 ~ 3453612 (+)
G37325 NA non-coding downstream 51728 3570177 ~ 3571272 (+)
G37343 NA non-coding downstream 84298 3602747 ~ 3602978 (+)
G37344 NA non-coding downstream 86306 3604755 ~ 3604970 (+)
G37363 NA non-coding downstream 401194 3919643 ~ 3920159 (+)
G36291 NA other upstream 1855410 1659733 ~ 1661032 (+)
G36223 NA other upstream 1978638 1503143 ~ 1537804 (+)
G35533 NA other upstream 2992661 491908 ~ 523781 (+)
G37392 NA other downstream 204295 3722744 ~ 3723503 (+)
CI01000005_04735429_04736817 COX20 other downstream 1216897 4735346 ~ 4737082 (+)
G39930 NA other downstream 3479095 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 4079540 7600541 ~ 7602964 (+)

Expression


Co-expression Network