CI01000005_03804929_03868048


Basic Information

Item Value
gene id CI01000005_03804929_03868048
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3804885 ~ 3868281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_03804929_03868048.mRNA
CAATATAAACCGGGCTGAAGATCATCTCCTCTCCCTCCGGCAAGATGGTCTTCCTTTGGAGCGGTGTGGAGGAGTTTGTGGAGTTTTCCCATCTGGTGAGTTGGAGCGATACAACGCACAGTGCTTGCTTCCAGAGGGGACTGGATGAGGATGTTATTCGGTTTTCGTCTCCTGGGCATTATTTGCCCTTGGTCGAGTCCATTAATTTCATCCTCTGGCTTAATGATTCTGATCTTGTTGTTGAAGAAGTAAAGGGATACAAGTACAACCCTCATCCAGTCCCATCTCGAAAGCGCTTGGGCGCTCCAACTCACCGCAAGCCTGCAACCAAACCCTTCACATTCACAAACATCAGGACCAACTCATCCGCTCCAGAGTCCACTCCCAGTACCAATATTACTTTAACCCCAGCCCAAAGGAGGAGGCTGAGGAAGAAGAGCGGGTATAAGGTTATACAGCATAAGGGCTGTGATCTCCCTGAGCAGAGCACGGTTCATGTGGTTCTGCCCCCGTCCACCTCGACCCAGTGCTCTGAGCTGGTCCAGCAGCGCAGGCTGGGCGGCGGGATGGAGAGCTTGACCCGACTTGACCTCAGTAGCTCCCGTCTGACCACCGCATCTGAAGGCCTGGCTGTCATTCTGGAGACAGATGTATCCAGACAGGGGGACTCTGTTGGACACACAGCTGTGTCAAGGTATCTTGTACCTCTTCGGTGGCCCATGCTTTTAGCTCTAATGAGAATGCTGCTTCCAGAAACTAGAGGCCACAGCAGTTTCTATGTGTTCTGTAAGACAGTCTGCAAGGCCATCCAGCCTGGAAAACTACGTGTTCGGTGCAGAGACTGCAAACAAGGCACCCTGACCCTCAGCAGGAGAACTTTCTCCAAATATGCTGAGGAGGAGAAGACGGCAAAGTTTATGCACTCGCTGTCAGAGCTCTTCATTTGGACCTTTGGAGATATTGGATTTAGCAGCACTTTCAATTTTTGCGTCGGCACAGCCCACATAATAATACCTCATGTGAATTATCCGGTAATCATTGGCTGCGCTGCGAAAGGTCAGCGGCAAACAGGACTTCAAATGTCTATAATTGAGTGTGGTGAACGCAAGCGCAGTCGACCAATCAGGCGCTTTGACTTGGGTCTGTGTGTATCAGATGTGTCTCTGCTGGATACAGGAAGTAGAATCCTCACAGCTGGCTCACAGACACAGCCCTGTTTGTTAAACAATAATGTAATTAAGGCTTTGTGGGACTGCGATGTTGATTCTCCTCCATGGGAAAAAAAAAACGTCCTGAGAGGGTGGGGAGGTGAAACTGATGTGAACAATGCGGGAGGCACGGTCGGAGTCAGGCGGAGTGGGGTGGGGGGACGTTGTCCCAAAACAATTATGGATGGAGAGAGTGTCTTAATCTGGCAGAAGGACAAGGAAGAGTGTGTGACAGAGGGACCGTGCTGCTGGGATGACGTCCTTCTCCCTAACAGGATTCATGGAGTATGTCAGTCACAAGACTGTGATGGCAGACTAGCGGAAATGGTCTACAGGGGACGTCTCGATAGGGTAATTCGACCAATAGTTGATGGTTTCCCACCATCGTTCTATGGGCGGAGGAACCTTCTCACTAGTATCCAACCAGAAGAAGATCTCCTCCATTTGTTTAAAAGGGCATCGACAAGGACGCGGCCAGTCTCTTACAATAGATGCGGGAGAAAGGGGTCATGGAGGACTCCAGTGCTGGTGTTTCAGTGTGCTGAGCGTCATGTGATCTGCCTGGACTGCTTCCACCTGTACTGTGTGACCAGACTCAATGAGCGGCAGTTTATCCAGGAGCCGCTGGTGGGCTACTCCCTACCCTGCGCAGTGATTCTCTCGCTTTCACTCTCTTTCTCAGTAGGACTAGCTGTCAAAAGAAAGATCTTCTCGATTCAAACATTGACTGTACAGTATATGTTTCCGCAGTGCACGCTGCTTGGAGACAAACGTAGTGGCTGCCTCATGTGTCCAACGGAGGAGGTAGATTGTTTTCTTCATGAGACCCTGAGCGATCCAATGAGGGAGCAAGAGCTTTGCCGACACCTGTGGAAGATTTTGAGGAACAGCTACTTTGACCCTTCAGTGCAGAAAGAGGGGATTCCAGGAGTTCCAGGGTGTCTGGAGGATACCAGAGTAGATACACAGCTCATCAGAGAAGCCCGTGAAAACAGATGCAACCTAGTTGTTCTGTGGTTGGACCTGGCAAATGCTTATGGATCCGTACTACATAAGCTGGTTGGGTTGGCGTTACAGCATCACCATGTTCCTGCGCTTTTAAGTGGTTCAGCCTTTGAAGTGGAGGCAATTGGTTCTTGCTGCATGTATCACCATGGAAACGATTTGACTCTGCCATCCACAAAGAGCCCCCTGTAATATGAGAGCATCTTTGGAAGCCAGTTGGGGTCCGTCCTGTAAGTGTGAGAGGTGTGCGAGTCTGCTTTTAGGGCTGAACAATTTTGAAAAAAAACTGACATTGTGATTTTGTTTGTCTGCAGTATATATTGCGATATGAAAAATACAGTAAGCATCACCAGATAACTTGAATAGCTTTATTTGGAAATAATTCATCATTCTAGTGGTTTTGTTGGGGAGTGCAAATATAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_03804929_03868048.mRNA True 2638 mRNA 0.49 17 3804885 3868281

Neighbor

gene id symbol gene type direction distance location
CI01000005_03782413_03784445 NA coding upstream 20066 3782413 ~ 3784819 (+)
CI01000005_03600059_03605667 NA coding upstream 198910 3599574 ~ 3605975 (+)
CI01000005_03521422_03522147 NA coding upstream 282509 3519224 ~ 3522376 (+)
CI01000005_03447497_03448897 NA coding upstream 354902 3447187 ~ 3449983 (+)
CI01000005_03423676_03430312 NCOA4 coding upstream 374404 3423676 ~ 3430481 (+)
CI01000005_03886705_03918267 NA coding downstream 16084 3884365 ~ 3918454 (+)
CI01000005_03924325_03937249 NA coding downstream 56044 3924325 ~ 3937423 (+)
CI01000005_03944039_03979362 UBR2 coding downstream 75758 3944039 ~ 3979659 (+)
CI01000005_04009363_04009659 NA coding downstream 139845 4008126 ~ 4009791 (+)
CI01000005_04073488_04107874 PKDCCA coding downstream 205207 4073488 ~ 4107874 (+)
G37344 NA non-coding upstream 199915 3604755 ~ 3604970 (+)
G37343 NA non-coding upstream 201907 3602747 ~ 3602978 (+)
G37325 NA non-coding upstream 233613 3570177 ~ 3571272 (+)
G37297 NA non-coding upstream 286436 3516442 ~ 3518449 (+)
G37284 NA non-coding upstream 306760 3495681 ~ 3498125 (+)
G37363 NA non-coding downstream 51362 3919643 ~ 3920159 (+)
G37366 NA non-coding downstream 72456 3940737 ~ 3941309 (+)
G37439 NA non-coding downstream 148484 4016765 ~ 4017597 (+)
G37378 NA non-coding downstream 176839 4045120 ~ 4045640 (+)
G37392 NA other upstream 81382 3722744 ~ 3723503 (+)
G36291 NA other upstream 2143853 1659733 ~ 1661032 (+)
G36223 NA other upstream 2267081 1503143 ~ 1537804 (+)
G35533 NA other upstream 3281104 491908 ~ 523781 (+)
CI01000005_04735429_04736817 COX20 other downstream 867065 4735346 ~ 4737082 (+)
G39930 NA other downstream 3129263 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 3729708 7600541 ~ 7602964 (+)

Expression


Co-expression Network