CI01000005_03782413_03784445


Basic Information

Item Value
gene id CI01000005_03782413_03784445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3782413 ~ 3784819 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_03782413_03784445.mRNA
TGTATGTGCGGTTTAATTCCAGCCATGGGTTCCCAGTGGAATTGGAAAAGGGTGCAAGTATAGCAGAGCTGAAGAAGACGGTGGGGCGTTTACAGGGCGTACAGCCTGATCAACTGCGGGTCATCTTTGCTGGACGCGAGCTCTGCAATGAATCCACACTTCAGGTGGTAGTGTGCACATGATGTCACACACTATGACAAGTATAAAATACAAAGTTTTGTATACGAGTGTAATAATAGTAACAGTTGTGATAGCTATTGGCATTTATAGCCTACCATTTAGCTTTAGATTGTTTTATTTAGGCTAAGATTTTAGGTTAATATGCATTACCTCAAACACCATAAATGCATTTCCTTTAGATTGGCGGGTTTGAGCGCAGCAAAATCCAGATTCTTCTGCATTCAGCAGATTCACTTTGTGTTCAGCAATGGACCTTGTTGGGAAACCAAATACTACATTGCTGATCTGGGAACATTTTGGATTCATGCCAAAACGAGAGAGGTGAACCAATAAATTTGGATGGCTTCATTTATGAGTCTGTCTGTGCATTTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_03782413_03784445.mRNA True 556 mRNA 0.41 2 3782413 3784819

Neighbor

gene id symbol gene type direction distance location
CI01000005_03600059_03605667 NA coding upstream 176438 3599574 ~ 3605975 (+)
CI01000005_03521422_03522147 NA coding upstream 260037 3519224 ~ 3522376 (+)
CI01000005_03447497_03448897 NA coding upstream 332430 3447187 ~ 3449983 (+)
CI01000005_03423676_03430312 NCOA4 coding upstream 351932 3423676 ~ 3430481 (+)
CI01000005_03317813_03368502 TJAP1 coding upstream 413029 3316294 ~ 3369384 (+)
CI01000005_03804929_03868048 NA coding downstream 20066 3804885 ~ 3868281 (+)
CI01000005_03886705_03918267 NA coding downstream 99546 3884365 ~ 3918454 (+)
CI01000005_03924325_03937249 NA coding downstream 139506 3924325 ~ 3937423 (+)
CI01000005_03944039_03979362 UBR2 coding downstream 159220 3944039 ~ 3979659 (+)
CI01000005_04009363_04009659 NA coding downstream 223307 4008126 ~ 4009791 (+)
G37344 NA non-coding upstream 177443 3604755 ~ 3604970 (+)
G37343 NA non-coding upstream 179435 3602747 ~ 3602978 (+)
G37325 NA non-coding upstream 211141 3570177 ~ 3571272 (+)
G37010 NA non-coding upstream 239435 3482064 ~ 3542978 (+)
G37363 NA non-coding downstream 134824 3919643 ~ 3920159 (+)
G37366 NA non-coding downstream 155918 3940737 ~ 3941309 (+)
G37439 NA non-coding downstream 231946 4016765 ~ 4017597 (+)
G37378 NA non-coding downstream 260301 4045120 ~ 4045640 (+)
G37392 NA other upstream 58910 3722744 ~ 3723503 (+)
G36291 NA other upstream 2121381 1659733 ~ 1661032 (+)
G36223 NA other upstream 2244609 1503143 ~ 1537804 (+)
G35533 NA other upstream 3258632 491908 ~ 523781 (+)
CI01000005_04735429_04736817 COX20 other downstream 950527 4735346 ~ 4737082 (+)
G39930 NA other downstream 3212725 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 3813170 7600541 ~ 7602964 (+)

Expression


Co-expression Network