CI01000005_03521422_03522147


Basic Information

Item Value
gene id CI01000005_03521422_03522147
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 3519224 ~ 3522376 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_03521422_03522147.mRNA
GTATAAATAAGTGGGACCACACATACCCCTTTTCCACCAGAATGATTGGTGTTCTGGAGCGAGAGCCTGTTCTCGGCCAGACTTGAGGAATGAACGATGATGTAACCCTACTATGTGTCGTTCACCTGCCTATAACCAGTCTAAAAAAACATTGCGTATCCCGGTGTTTGTGCAGGCAGTGCGGCACTTCTGTTTTGCTGTTCACAGTACTGGGAGTGATTCTAGCGAACCGGCAGCTTGCATAAACAGCCGGTACTCTCATCTGTCCTTTTCAGAGATAAACTGAAACTGAAACCGTTGATTCACTCGCTCTCTTGCACAGTTTTATATATTTAGATGTAAAGGGCAATGTAGTGCAACATTATTATATTGCTCAACGAGACAGCACCAGTATTTCTCTGTCCCCCACTCCCCGGCTCCGTTCGAGATCAGCAAGTTTTTAGTGCCGGAGTTGAACTGATCTTTCCAGCCCGGAACCCCCTTTTCTGCAGCGGGAATGTATGGTTCAAGAATGGACAAAGGCCGGGAACCCGCACAGGAACCATGATGGTGGAAAAGGGGTTACAGAATCTGGGCCACAAGAACTCTGCTGCAGAATTCACAGGAACATCTGTCATTCATAAAAGAGAATGGTAATACTTTAGTATGAAGTATTAATACTTTAGTATTAAACTCCTAATTTACTGCTTATTAAAGGATTGGTACACTTCAGAATTAAAATTTCCAGGTGATTTACTCACCCCAATGTCATCCAAGATGTTCATGTCTTTCTTTCTTCAGTCGAAAAGAAATTAAGGTTTTTGAGGCAAACATACCAGGATTTTTCTCCATTTAGTGGACTTTAACGGTTACCAACGGGTTGAAGGTCCAAATGTCAGTTTCAGTGCAGCTTCAAAGGGCTCTACACGATCCCAGATGAGGAATAAGGGTCTTATCTAGCGAAACAATACTTTTTAACCATTTATGTTCATCTTGCACTGCTCTGCGATGCGCCACACATTACGTAATCACGTTGGAAAGGTCACGCGCGACGTAGGCAGAAGTACCGACCCAGTGGCAGGGTAGGACGAAAAACTCCATCTCATTTTCTCCCCCAACTTCAGAATTGTCTGATGTTTTAACTTTTTTTTGTAAAGGCCATTTGACTTAGTCTTTGCACGTTCGTTTTGTAGACACTGGATCGGTACTTCCCCTACGTCACATGTGACCTTTCCAACGTGATTATGTAATGCGTGGCGCATCACAGAGCAGTGCAAGACGAGCATTTGTGGTTAAAAAGTATATAGATTTTTATTTATTTTTTTAGAAAATGACAGATCGTTTCGCTAGATAAGACTCTTATTCCTCGTCTGGGATCATGTAGAGCCCTTTGAAGCTGCAGTGAAACTGACATTTGAAAGTGAAATCCACTATATGGAGAAAAAACCTGGAATGTTTTCCTCAAAAACCTTAATTTCTTTTTGAATGAAGAAAAAAAAAAAATAATAATATCTTGGATGACATGGGATGAGTAAATTATCAGGAAATTTTAATTCTGAAGTGAACTAATCCTTTAATAGTTAGTAAGGTAGTTAAGTTTAGGTATTGAGAATGTAGAATATGGTCATGCAGAATAAGGCATTAATATGTGCTTAATGAGTACTAATAAACAGCCAATATTCTAGTAATATGCATGCTAATAAGCAACTAGTTAAAAGACCCAGAAATAAAGTGTTACCAATAGAACAAATATGTCTCTTGCATGTAAAGGTGAAGTGTGTAATTTCAGGGCCACTAGTGTCATCAAACAGGTTAGTACACTCCTCCCATCTGCAAATAACTGGACAAAGAGTCCCATTTAAAACTTCCACATATTTCCTCTCCAAATTTTTGCAGAAGATGTGAAAAAGTCTGCAGATTCCATCTGGTCTCATGTATGAGTGAGTTTGTTATTTAAAGTAGCTAAAAATCTGAAAGCAGGGGAGGTGGGTGGATGATTTAAGCCCCTCTGTAGTACAGTCACATGACCCGGTGCTCTCCTTTGAGGATGGGGCCTCTCAAACAGTTGCCACAGCAATGCACTCTCTGCCCCGTGAACCCCAACTAGCCTTTATTCCCTGTGCAACCGAACTGTACCAACACTAGCTCCAAAACAAAGTGTTACTCAATAACATCATGAGAGACAGAGGGAGGGACACACAGAGAGATAACAGACCAGAATGAGAGGGAGAGAAAAGATGCTGGACTGGAGGGGAAGGGGAGAGAGCCCCACTGGGAGCATTATCCAACCCTGTAGGGCCAAAGAGCTCGCTCAGGATTTCCACACTCCAATTGTAAACAAAGAGCCTTTTGATGCTCTCTCAGCCTCAAAGACATGGATGACTACTCAATCATGTGACCACAGAGCAGTCCCTGCCGTTCACACGTACACCGTAGCCACACACAGAGTTACACCCGTCGACATATACAAAGTCGCATTACTGATGGAAAGGAGACCTTTGGACAAAAGGAAGCAGTATGTGCACCTGCAGGGACAAAGATATGGAAAAATGTGCAGTCATTTCTCGAGATCCGAATGCGCATGCACACAAATGAAGAGATTTGCTGGCAATACGCACTCATTTCTGCAAAGAGAGACATGGGCTCTATTCAACCTCTCTCTCTCTTTCACCAGTGCTGAGCACTCAGAGAAACAGCGAGAGGCAGAAAAACATGTCATGCAAGAGGGAGCCTATTGTGCCATGAAGGGAACAGATGGAACCTCCCACAAACCACTGGGCCCTTCATTCTCCTGCCTTCCTAAAAAAACACCGCCACAAACAGCAACATTGGCTCTGCTCACCCATAAAGCGCCTTTGCTTCTACATCCACTCAGGAATTCTTACAAAGATGTGAAGGTGTCCATGTGCAATCTTGCAGGCAGAGATTCGTTTATGTGTGACTAACGCTCGCTGAGCACATCACGGGAATCCCCAAACAGAACTTGTGCATACCCCGCCTAGATATCGGCTCTTAAACGCTTCTCCCAGCAGTCGCTCGCAATCTATGGGGCTCACAATCCCATCGTGAGCATGTGTGCCAGCGGGTGAATTAGGCGAGAAGAGTTTGAGAATCTCAAAGCATTGGCATGTGAATATGTACGAAGGAGAAAGAACAGGCAAGGAACGAGATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_03521422_03522147.mRNA True 3153 mRNA 0.43 1 3519224 3522376

Neighbor

gene id symbol gene type direction distance location
CI01000005_03447497_03448897 NA coding upstream 69241 3447187 ~ 3449983 (+)
CI01000005_03423676_03430312 NCOA4 coding upstream 88743 3423676 ~ 3430481 (+)
CI01000005_03317813_03368502 TJAP1 coding upstream 149840 3316294 ~ 3369384 (+)
CI01000005_03167707_03171889 DNPH1 coding upstream 347204 3167707 ~ 3172020 (+)
CI01000005_03097346_03117235 ZNF318 coding upstream 401847 3096946 ~ 3117377 (+)
CI01000005_03600059_03605667 NA coding downstream 77198 3599574 ~ 3605975 (+)
CI01000005_03782413_03784445 NA coding downstream 260037 3782413 ~ 3784819 (+)
CI01000005_03804929_03868048 NA coding downstream 282509 3804885 ~ 3868281 (+)
CI01000005_03886705_03918267 NA coding downstream 361989 3884365 ~ 3918454 (+)
CI01000005_03924325_03937249 NA coding downstream 401949 3924325 ~ 3937423 (+)
G37297 NA non-coding upstream 775 3516442 ~ 3518449 (+)
G37024 NA non-coding upstream 11211 3472916 ~ 3508013 (+)
G37284 NA non-coding upstream 21099 3495681 ~ 3498125 (+)
G37013 NA non-coding upstream 28923 3485629 ~ 3490301 (+)
G37282 NA non-coding upstream 39520 3477220 ~ 3479704 (+)
G37325 NA non-coding downstream 47801 3570177 ~ 3571272 (+)
G37343 NA non-coding downstream 80371 3602747 ~ 3602978 (+)
G37344 NA non-coding downstream 82379 3604755 ~ 3604970 (+)
G37363 NA non-coding downstream 397267 3919643 ~ 3920159 (+)
G36291 NA other upstream 1858192 1659733 ~ 1661032 (+)
G36223 NA other upstream 1981420 1503143 ~ 1537804 (+)
G35533 NA other upstream 2995443 491908 ~ 523781 (+)
G37392 NA other downstream 200368 3722744 ~ 3723503 (+)
CI01000005_04735429_04736817 COX20 other downstream 1212970 4735346 ~ 4737082 (+)
G39930 NA other downstream 3475168 6997544 ~ 6998340 (+)
CI01000005_07600541_07600974 NA other downstream 4075613 7600541 ~ 7602964 (+)

Expression


Co-expression Network