Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000006_05893735_05901666 |
| gene name | ZW10 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 5893531 ~ 5902022 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| zw10 | Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and mitotic spindle assembly checkpoint signaling. Predicted to act upstream of or within cell division and mitotic cell cycle. Predicted to be located in cytoplasm; kinetochore; and nucleus. Predicted to be part of RZZ complex. Orthologous to human ZW10 (zw10 kinetochore protein). |
| id | name | namespace |
|---|---|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | biological_process |
| id | description |
|---|---|
| K11578 | ZW10, DSL1; protein transport protein DSL1/ZW10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000006_05893735_05901666.mRNA | True | 2780 | mRNA | 0.44 | 15 | 5893531 | 5902022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_05870762_05888691 | USP28 | coding | upstream | 4396 | 5870762 ~ 5889135 (+) |
| CI01000006_05821114_05830402 | ZBTB16, ZBTB16A | coding | upstream | 62970 | 5820438 ~ 5830561 (+) |
| CI01000006_05739275_05746584 | NA | coding | upstream | 146345 | 5738808 ~ 5747186 (+) |
| CI01000006_05729706_05734532 | NA | coding | upstream | 158863 | 5729268 ~ 5734668 (+) |
| CI01000006_05719079_05723838 | NA | coding | upstream | 169366 | 5719079 ~ 5724165 (+) |
| CI01000006_05903309_05926132 | DLAT | coding | downstream | 1287 | 5903309 ~ 5926132 (+) |
| CI01000006_05933352_05969576 | NA | coding | downstream | 31152 | 5933174 ~ 5970118 (+) |
| CI01000006_05977013_05979433 | GUCA1D | coding | downstream | 74459 | 5976481 ~ 5979890 (+) |
| CI01000006_05987812_05989546 | NA | coding | downstream | 85738 | 5987760 ~ 5990537 (+) |
| CI01000006_06006532_06022059 | POLQ | coding | downstream | 102780 | 6004802 ~ 6022182 (+) |
| G43887 | NA | non-coding | upstream | 89370 | 5792917 ~ 5804161 (+) |
| G43898 | NA | non-coding | upstream | 102617 | 5789421 ~ 5790914 (+) |
| G43903 | NA | non-coding | upstream | 119582 | 5771881 ~ 5773949 (+) |
| G43942 | NA | non-coding | upstream | 450608 | 5442465 ~ 5442923 (+) |
| G43934 | NA | non-coding | upstream | 465213 | 5428100 ~ 5428318 (+) |
| G43970 | NA | non-coding | downstream | 170375 | 6072397 ~ 6072706 (+) |
| G43988 | NA | non-coding | downstream | 208144 | 6110166 ~ 6110406 (+) |
| G43990 | NA | non-coding | downstream | 218336 | 6120358 ~ 6120735 (+) |
| G43908 | NA | non-coding | downstream | 249851 | 6151873 ~ 6154727 (+) |
| G43904 | NA | non-coding | downstream | 292147 | 6194169 ~ 6199969 (+) |
| G43896 | NA | other | upstream | 121756 | 5770089 ~ 5771775 (+) |
| G41996 | NA | other | upstream | 769382 | 5117206 ~ 5124149 (+) |
| CI01000006_03734862_03735227 | BANF1, BANF1.S, BANF1.L | other | upstream | 2157553 | 3734554 ~ 3736035 (+) |
| G41591 | NA | other | upstream | 3054110 | 2836167 ~ 2839421 (+) |
| G41424 | NA | other | upstream | 3232961 | 2645662 ~ 2660570 (+) |
| CI01000006_06104927_06109730 | NA | other | downstream | 206462 | 6104927 ~ 6109820 (+) |
| CI01000006_06122278_06122736 | NA | other | downstream | 220013 | 6122035 ~ 6122751 (+) |
| CI01000006_07167131_07168925 | NA | other | downstream | 1264767 | 7166778 ~ 7168925 (+) |
| G44872 | NA | other | downstream | 1454330 | 7356352 ~ 7387884 (+) |
| G45178 | NA | other | downstream | 1719969 | 7607604 ~ 7683671 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
