CI01000006_06289413_06296642


Basic Information

Item Value
gene id CI01000006_06289413_06296642
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6289299 ~ 6297106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06289413_06296642.mRNA
GTATAAAATAAAAAAAAAAATCAGTGCATCACTAATATATATATTTTTTTTTCTTTAACAGCAGCTTGTGCGAGCCAATCCTCCTGGCTGCGAACACGCCAACCCTCATCACAAATGGCTCAACAAGCAGGTGAAAAGCTTCCTGATCCTCCTGAAGAACTTTTACTACCAGAGGGTTGGAAGCATACGCTGCCAAAAGAGCTACATCTCTGGGTCAGTAAGACTCTCTTCATCAGAGATGCATCTGGGAAGTTGACGCTGACTGAACCTCTAAAGCTGTGGTGGTCACCTCCTGGACCCCAGTTGTTGTATGCACAGCCTCCTCCTCGTCCTGACCCGTTCTTTCAGAGCAGGCTGTTCCTTTGGATGCCTAGCCGCATGTGGGCATACAGGCTAGTGTGCACGAAGCCCAACTGCCGTCGTCTCGGCAATTATTTGAGGCCTTGTGGGCTACACAACACCGTCCAGAGGGTTTTGGACATGAGCGGGTGGTATTTCATTGTCACAGAGTACCTAGAGTGCTGTTCTTGCAAGAAGAAGGTGGCAGGCTGGTCACAAGACATTCTGGATCAATTGGATCTTATCCATCGTGAGAAATTCCCAGCAGTCCTGACCTACAGGCTGTCTTGCGATAAAGAACTTGTTAGACTGATGCAGTGTCGGACACCAGGGAAGAGTGCAACTGAGATGTACCAGCACCTTTGTGTCCGGCATAAGGAGCGGTGGATGGCTCAGGCCGCAGAGTACCTCTCTGTATTGAACAAGTTTCAAGATCTTAGCACTGTTTCTCTCAGGGTGCCACAGATGAGGCCAGTGCCTTCTCCGTCGTTGCTGTTGGCGGTATATGCAAAGGATGTATTGACACGACTCGGAGAGATGAAGGCCAGGGTCACTTCCATTTACGGCTCCATCCTGAAGATGGCCTCCACCGAGAAGGTCACTAAGAAACACAATTCAGCTGTGTGGGCCACAAATGTAGGAAATGAGAATGGGCAGGTCCTAATGTGTGTCCTGACCCAAACAGATGGAGAGGGCCTGCTTCCCATGTGCTCCGGCTTGATGGAACGTTACCGGCGAGCCAGAGAACCTCCTCCGCAGGTTCTGTACGTGGGCCAGGACTGTTGTTCCACGACAGGCAAGAGCAAAATGGAAGCCATGTTCCACGAGTGGGACCAGCTGGTTGTCAGGCTGGACGCATGGCAGTTTATGCAGCGTTTCGCAGCAGGCGTCACTTCAGAAAGCCACCCACTGTATGGCCCCTTCATGGGACGGCTCTTCTCCTGTATATTTGAGTGGGATGCTGGAGATTTAAAAAGACTGCAAGAAGCCAAGCAACAGGAGCTGCGACAAGATGCCAAAGCAATCGGGAAGCCCACTGCCAAAGAGTTAGTAAGGCACTGCCGCCACCGGACACGTGAGGCTCAGGTGACCAAGCAGCTCATTGAACAGCTGTTGAAAGACTTCATGGGAGCTACAGACTTCATGGGCAACAAACTGGTGGACCAGGAGAGGATGGAAGAGATCTGGCCAGCCCAACAATGCCATCTTCGGTGTATCCAGGACCCTCCAGGCATCCAGCTTTACAGGAAGGTTAGAGAGGTCACCAGAGGAGGGTTAGTTCTTCCTCTGTACCACTGTGCACGTGGTATAGAATCCCTTGAAGCATTCCATCAGCATCTGAACCACTTCATTCCAGGTACAAGTACAAATGACTTGTACTTCCATGTTTATCTGCTAGAAGGGGTAGTGCAGTGGAACAAGGTGCGATCTGTTGCTGTCGATGAAGGCAGTCCACTGCAGCGCTATGCAAACTGTCTGAGCCAAAAGTTTCTAGGCTGTAAACTGGTTGAGGATCACAGTAGCCCAGGAGAGTACACTGGTGAGCTCATAGGAGTGGAGTATCTGTACTCTCAAACCAACAGAGTGTTGGAGGTGGACGGCATTATGGATCCTGATGCACCTGATGGAAGTGATGAGCAGCTGGAGGTTGACCTGGAATATGAGGATTCAGGTTTTAATGACCTTAAATCACCAGAGTTCTTGGAGTTCAGCCTCAAATTGCTTCAAGTTCAGGCAGTGCCCCCGCAATCAGTTTCCATCGGCCTATCAACATCCCAACCGGATCCAATAGTGTCTTCCACCTCTGGGCCCATAAAGGATGAGCAATACGCTGCAGACCAGTTCACGCCTCAGGGCATCTCACAGGAAGATGATAATGAGGAAAAATGCATGGGGCCTGATGGTGTTCCTGGGTATGACCGTGTTATTAACCTGGCCAACAGTTTGGTTGAGCTTAGAAATCATGGATTTGTCACACAGCGAAAGGTGGACGAGATTGTCACTCTGTGGGATAAGCTATCAGAGCATGACAAGCATGGTGTCGTCCACCCGACACAGCCCGAAAACAAACTGCACTTTAACAACAGCCATACCGATACCTTTGCGACTCCGTGCATAGATGGTCTGAAGAGCCGGCTTGTCGCTGCCATTTGCCTCGCTCTCAGCCACATTCACCCCGCCGGTCAGACCATCGCCGGTGTCAGGGAGAACAGGTGGGCTGCCGTCCTCCGGGACTACAACATGATTAGGGACATTGTTCAGGACAGCACTGCCATCTCAACCCAGACACGGTTACAGCTGCTTGAGATAAATCAGCGGACATTGTGCCAGTGGTACAATGCCAGGAAACAGGGGCAAGAACAGTTGGTTTTGAACCAGAGCATTGACCACATGAAGGCTTCTGAGCCCTTACTTCCTGTGCCACACGACGTTCCGGAGCCCCTTCAACATGGAGATGTAATTAAAGTAGTTATTGGAGGTCCCAAGCCTCCTGATTCCCCAGCCTTACGACTGGTCCCAGAGCAAAGAGCTGCTGCCACCAGACTCCCTAGTCCAAAGGTGCCTCGGACCACCGCTTGGCGGCGGAGGAAGGCAGAGGAAGAGGCAGCCCAGCGAGGGTTACCCCTGAAGCGGCTTTCCGAGCAGTATCTTTGTCAAAAGTGTGGCAAACCAAAGACAAAAGAGTTTGGTCACAGCCAGTTCCGCGGAGTCCACTTTTGTGCTAGAGCCTCTGGAAAGACGGTAGGGCAATGGATGGAGGAGATGAGGAGAGCAAAGTGAGCCAACACGGACATTTTCTGTTTTTTGTTATATATATAATTTGTTATTTGTAAGTTCCATTGTTTTATATACTTTGATCATCCAGGTAATAGCCAAAAATTATTTCTATAAATTAAATTATAAATTTTGTTTTTCACTCACTGGTATGTTATTTGTGAAATGGCAATAATTTCTATTTTTTTATTCTTATCTCAGTGAATATTTCTTTCTTAAATGAACACATTTAACATTGAGGTTTATTTACAATTTAATAATTTGCTGTAATTGTGTGTACAATAACTATACATGGTGAACAAATATTACATAATTTTGGGGTCTTTTTCTTTTGATTTGACTTTATTTACATGGACCGATTTGTATTTGTCAAACCTTGGTGTACACATGAAAAGTGCATACACAATACAGCATCACAAGAAACAGCTGCTTTACCAATATTAGGAACACATTTAGTTTATTTATTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06289413_06296642.mRNA True 3584 mRNA 0.48 9 6289299 6297106

Neighbor

gene id symbol gene type direction distance location
CI01000006_06267132_06269409 NA coding upstream 19242 6267132 ~ 6270057 (+)
CI01000006_06225846_06258303 MYO5B coding upstream 30784 6225846 ~ 6258515 (+)
CI01000006_06201072_06204390 CFAP53 coding upstream 84604 6201072 ~ 6204695 (+)
CI01000006_06192438_06193928 NA coding upstream 95295 6192438 ~ 6194004 (+)
CI01000006_06171151_06179449 PVRL1A coding upstream 107924 6171151 ~ 6181375 (+)
CI01000006_06304760_06308641 SKP2 coding downstream 7073 6304179 ~ 6309263 (+)
CI01000006_06319924_06332207 NA coding downstream 22818 6319924 ~ 6332207 (+)
CI01000006_06432698_06437087 SLC35F2 coding downstream 134990 6432096 ~ 6437592 (+)
CI01000006_06438579_06447777 ELMOD1 coding downstream 141473 6438579 ~ 6449161 (+)
CI01000006_06598608_06603726 WDR73 coding downstream 301442 6598548 ~ 6603830 (+)
G44012 NA non-coding upstream 3424 6285648 ~ 6285875 (+)
G44010 NA non-coding upstream 14065 6275005 ~ 6275234 (+)
G44009 NA non-coding upstream 16072 6272938 ~ 6273227 (+)
G43904 NA non-coding upstream 89330 6194169 ~ 6199969 (+)
G43908 NA non-coding upstream 134572 6151873 ~ 6154727 (+)
G44035 NA non-coding downstream 90609 6387715 ~ 6390438 (+)
G44053 NA non-coding downstream 124824 6421930 ~ 6424506 (+)
G44072 NA non-coding downstream 175080 6472186 ~ 6472522 (+)
G44074 NA non-coding downstream 176081 6473187 ~ 6475341 (+)
CI01000006_06122278_06122736 NA other upstream 160624 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 179711 6104927 ~ 6109820 (+)
G43896 NA other upstream 517524 5770089 ~ 5771775 (+)
G41996 NA other upstream 1165150 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2553321 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 869683 7166778 ~ 7168925 (+)
G44872 NA other downstream 1059246 7356352 ~ 7387884 (+)
G45178 NA other downstream 1324885 7607604 ~ 7683671 (+)
G45265 NA other downstream 1586761 7883867 ~ 7920355 (+)
G45336 NA other downstream 1722236 8019342 ~ 8021951 (+)

Expression


Co-expression Network