CI01000006_06438579_06447777 (ELMOD1)


Basic Information

Item Value
gene id CI01000006_06438579_06447777
gene name ELMOD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6438579 ~ 6449161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06438579_06447777.mRNA
TTGTGTTTTGTGCAGGCGGTCAGACCATCTGCGAATGCGAGATATAACGTTACAGTTGTAGCAAAGCAGACAATCACGATGAAGCATTTTCTAAGGGTACTGACCCAGTTGCTGGTGTTCTTGTACTGTAAGTGTTTGTGGCGGGGTCTGAAGTTTGTCATCAGGAAGCTTTTGCAGTCTGCCGTCAGCGTTCACCCAGATTCTGTAGAGAAAACTATTGATGATATTTTGTCCCTGAAAAAGATCAACCTTGACACTAACCCACAGCTTGGCATCTCTCTCCAGGCTTGCCTTCTTCAGATTGTAGGTTACCGAAACCTAGTAGTGGAGGTGGAGAAGCTGCGTAGAGAGCCATACGACTGTGAAAACCCAACACATGAAGAGATGCTCATGAAGCTGTGGAAGGAACTCCGTCCTGATTCTCCTCTCTCTGGACGCATCTCCAAGCAATGGTGTGAGATTGGTTTCCAAGGAAACGACCCCAAGACTGATTTCAGGGGCATGGGTCTCCTGGGCTTGCACAACCTACTGTATTTTGCAGAGCATGATAAAGCCACCGCTCTCCAAGTTCTTCATGACTCATTGCAGCCCAAACACAGGTCAGATCCTTCAGACAGTCCTCTTGGGTGGTTCCTATGTACACTCTACTGTATATACTCAGCTATGGTGATTTTTTTCATGCCGTGTAATCCATCAAACCTTCAGCATGCTCCGTCTCCATCATGCACATCATGCACCCACACATACCTTTTTTTCTGTTCCTGCTTCTTTTTTATTCCCATCACTGTCATACACAGGAACCTTTCCAAAGAGGAAGCCAGTAAGATGAGCAAAGCTGAGTGGGACAAGAAAAAATTTGACAAAGCGATTGGATACTCCTTTGCCATAGTTGGCATTAACATCACAGACCTGGCATATTCCCTGCTGGTGAGCGGGGCTCTGAAGACTCATCTGTACAATGTGGCACCAGAGATGCCAAGTCTAGTGCACTTCCAACAGACTTTCTGTTATCTGATGCAGGAGTTCCACAGGTTCTGGATTGAGGAAGATCCATGTGACATCATGGAGTTCAATCGTGTGCGCACCAAGTTCTACAAGCGCGTCCTGAAGCAGCTGAAGAACCCTGACATGGCACTGTGTCCTCACTTCACGGCATCTGACCTTCACCTGGTCAACCTGTAGCTTCTCACTCATCTCAACTCTTGTGACACTTCACCTTCTCATCCTTAAAGCCCATGTCTCATTACTGCCAACTGCTTAGCCGGTCTTTTTCTCACACATTCTCTCACCAATGTCTCCTTCAGCCCATCTGACCAGAAGCAACTGAAGATCACCAGCACTGCTGAAGACCATGTTGATTGTACGTGCGCATGGCAACAGTGCACCTCCTTACAGCTTTCACAATGATTGTGATATTTACAGCTACTGTATGCTGAAGTCTTAATCAGCATCTGAATGTGGATCGGAGGGAAATCTCTCCTGATAAGACAGGGCTCCCTATCCACCAGTAGGTAGAGCTGTTGGTGCATATTAGGTAAGACAGTGAGCTTCAGGCATGCGAGAGTTTCTACCCACATCCACCGCAGAAGGCTGCACTGATACCAGGCACACTTAGAAACAGGTGGCCCTTGTTTGTATACAGTATACTTTTGGAGCTGTTATATGAAGGATAACCTTTCTTTACTTATTGTGAATCTGTTAAAGGAATATTCAAGGTTCAGTACAAATTCAGCTCAATCAACAGTACTTGTGGTATAATGTTGAATATCACAAAAAAAAAAAATATATATATATATATAATGGATGTTTCTGGTTTACAGTGAGGCACTTACAATGGAAGTGAATTGGGCCAATTTGTAAACATTAAAATTCAATAGTGTAGCCACAAGATTTAAACAATATACATGATAACACAATACTAACCTTTTCTGTCAAGTATTTTCCAATTTTATAACATTTTTGCCATGACAACCATAAAACAACTGTAAATACAATGGGGCCGTTTACACGACACCGTTTTCAACTAAAAACGGAAAACTTTTTATGCGTTTTGGCCATTCATTTACATGACAACGACGTTTTGGTGGTCTGAAAACGCAAACTTTTGAAAACGGGTTTCAAAGTGCAAGTTTTTGAAAACGGTCTCCGTGTGAACAACAGAAACGCGAATCTGTGAAAACGTCGACGCCGTGCACATGCGCATTACACGTTCAGTCTATAGTGTTTCATCGCCATCTAATGGCCGGACAGCAGAATACAGAGTTTTTAGTCATTTTCACGGATTCGTATGAATGAGGATCGTTTTGACAATGGTGTCTGTACGCGGAAAACTCAAAGGAAAAACTTCTCCGTTTTAAGCATATCGTTGTCGTGTAAACGTGCCCTTAAACGGCTTGACAACTCAGAAAATACGTTTGAACAGAATAATAGTACTTTTATAATATTAGAAGCTTCAATTTTATTTTAAGAAAACAAATGGAAGAGTCAACATTATTTTTGTGGTAATCAACATTTCCAACAGATGCTGTCAGTTGAGCCTTACTTGCGTTGAACTCGGAATAATCCA

Function

symbol description
elmod1 Predicted to enable GTPase activator activity. Predicted to act upstream of or within positive regulation of GTPase activity. Orthologous to human ELMOD1 (ELMO domain containing 1).

GO:

id name namespace
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06438579_06447777.mRNA True 2566 mRNA 0.43 10 6438579 6449161

Neighbor

gene id symbol gene type direction distance location
CI01000006_06432698_06437087 SLC35F2 coding upstream 987 6432096 ~ 6437592 (+)
CI01000006_06319924_06332207 NA coding upstream 106372 6319924 ~ 6332207 (+)
CI01000006_06304760_06308641 SKP2 coding upstream 129316 6304179 ~ 6309263 (+)
CI01000006_06289413_06296642 NA coding upstream 141473 6289299 ~ 6297106 (+)
CI01000006_06267132_06269409 NA coding upstream 168522 6267132 ~ 6270057 (+)
CI01000006_06598608_06603726 WDR73 coding downstream 149387 6598548 ~ 6603830 (+)
CI01000006_06653186_06657164 NA coding downstream 204025 6653186 ~ 6657276 (+)
CI01000006_06658495_06666257 CHRDL2 coding downstream 209334 6658495 ~ 6666498 (+)
CI01000006_06790435_06791964 NA coding downstream 340949 6790110 ~ 6792805 (+)
CI01000006_06800620_06801564 NA coding downstream 351199 6800360 ~ 6801622 (+)
G44053 NA non-coding upstream 14073 6421930 ~ 6424506 (+)
G44035 NA non-coding upstream 48141 6387715 ~ 6390438 (+)
G44012 NA non-coding upstream 152704 6285648 ~ 6285875 (+)
G44010 NA non-coding upstream 163345 6275005 ~ 6275234 (+)
G44009 NA non-coding upstream 165352 6272938 ~ 6273227 (+)
G44072 NA non-coding downstream 23025 6472186 ~ 6472522 (+)
G44074 NA non-coding downstream 24026 6473187 ~ 6475341 (+)
G44136 NA non-coding downstream 198713 6647874 ~ 6650111 (+)
G44162 NA non-coding downstream 238158 6687319 ~ 6687577 (+)
CI01000006_06122278_06122736 NA other upstream 309904 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 328991 6104927 ~ 6109820 (+)
G43896 NA other upstream 666804 5770089 ~ 5771775 (+)
G41996 NA other upstream 1314430 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2702601 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 717628 7166778 ~ 7168925 (+)
G44872 NA other downstream 907191 7356352 ~ 7387884 (+)
G45178 NA other downstream 1172830 7607604 ~ 7683671 (+)
G45265 NA other downstream 1434706 7883867 ~ 7920355 (+)
G45336 NA other downstream 1570181 8019342 ~ 8021951 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location