G44012


Basic Information

Item Value
gene id G44012
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6285648 ~ 6285875 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU49959
GTTCAGTCTTTCTGGGGCAAATAAATTATTGTAAAAATTATTCTTTAATTTACAAGAAATAGGTATGTGAATTATATGTTCTTGTAAATTTGTTTATTATTCCCATGAGAAAAACTGCACAATATACATTAGAATTAGTATCAAAAGTAGTACATTACAACCCAAAAATAAAATATTGCAGAGATGTAGCTTTTCTACAAATTAAATGTAATCAGAACAGCTGCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU49959 True 228 lncRNA 0.52 1 6285648 6285875

Neighbor

gene id symbol gene type direction distance location
CI01000006_06267132_06269409 NA coding upstream 15591 6267132 ~ 6270057 (+)
CI01000006_06225846_06258303 MYO5B coding upstream 27133 6225846 ~ 6258515 (+)
CI01000006_06201072_06204390 CFAP53 coding upstream 80953 6201072 ~ 6204695 (+)
CI01000006_06192438_06193928 NA coding upstream 91644 6192438 ~ 6194004 (+)
CI01000006_06171151_06179449 PVRL1A coding upstream 104273 6171151 ~ 6181375 (+)
CI01000006_06289413_06296642 NA coding downstream 3424 6289299 ~ 6297106 (+)
CI01000006_06304760_06308641 SKP2 coding downstream 18304 6304179 ~ 6309263 (+)
CI01000006_06319924_06332207 NA coding downstream 34049 6319924 ~ 6332207 (+)
CI01000006_06432698_06437087 SLC35F2 coding downstream 146221 6432096 ~ 6437592 (+)
CI01000006_06438579_06447777 ELMOD1 coding downstream 152704 6438579 ~ 6449161 (+)
G44010 NA non-coding upstream 10414 6275005 ~ 6275234 (+)
G44009 NA non-coding upstream 12421 6272938 ~ 6273227 (+)
G43904 NA non-coding upstream 85679 6194169 ~ 6199969 (+)
G43908 NA non-coding upstream 130921 6151873 ~ 6154727 (+)
G43990 NA non-coding upstream 164913 6120358 ~ 6120735 (+)
G44035 NA non-coding downstream 101840 6387715 ~ 6390438 (+)
G44053 NA non-coding downstream 136055 6421930 ~ 6424506 (+)
G44072 NA non-coding downstream 186311 6472186 ~ 6472522 (+)
G44074 NA non-coding downstream 187312 6473187 ~ 6475341 (+)
CI01000006_06598608_06603726 WDR73 non-coding downstream 312717 6598548 ~ 6603830 (+)
CI01000006_06122278_06122736 NA other upstream 156973 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 176060 6104927 ~ 6109820 (+)
G43896 NA other upstream 513873 5770089 ~ 5771775 (+)
G41996 NA other upstream 1161499 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2549670 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 880914 7166778 ~ 7168925 (+)
G44872 NA other downstream 1070477 7356352 ~ 7387884 (+)
G45178 NA other downstream 1336116 7607604 ~ 7683671 (+)
G45265 NA other downstream 1597992 7883867 ~ 7920355 (+)
G45336 NA other downstream 1733467 8019342 ~ 8021951 (+)

Expression


Co-expression Network