G44053


Basic Information

Item Value
gene id G44053
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6421930 ~ 6424506 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50014
TTTCTAAGGAGCATATCACAGTAGTTGGCCAGCAGCTCTGGACATTTGGACTCTGGTTGTGTTTTCAGACCCACACCTTTCTGTTTTAGAGGGAGCTCTAGTTTAAATATTGTTGCGTCATTCACTACTGCTTTGTATGCTTTATCCCTGGATGTTAGGAAACGTGGGTCATCTTGGAATGCTTCCTTAACTAATTTACTAAAGCGGTTAAACAATGTTAGGAGTTGCTCGACATATTTTTCAGAGTCCTGCAAAAATAAAACATCAGTAAGTCATAGAGAGCATTAATTAAGAATTCTGAGAAACAGTTTGGAGTCATATTATGCATATTAGGGAAGTGCGCCATGACTAATTTCCATAATGTTTAAACTGAGGTTTTATAACCGACTAGTCGACTACTCTAAGAAACCCCCAGAAAACAGTCAAAAACAGTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50014 True 437 lncRNA 0.36 3 6421930 6424506

Neighbor

gene id symbol gene type direction distance location
CI01000006_06319924_06332207 NA coding upstream 89723 6319924 ~ 6332207 (+)
CI01000006_06304760_06308641 SKP2 coding upstream 112667 6304179 ~ 6309263 (+)
CI01000006_06289413_06296642 NA coding upstream 124824 6289299 ~ 6297106 (+)
CI01000006_06267132_06269409 NA coding upstream 151873 6267132 ~ 6270057 (+)
CI01000006_06225846_06258303 MYO5B coding upstream 163415 6225846 ~ 6258515 (+)
CI01000006_06432698_06437087 SLC35F2 coding downstream 7590 6432096 ~ 6437592 (+)
CI01000006_06438579_06447777 ELMOD1 coding downstream 14073 6438579 ~ 6449161 (+)
CI01000006_06598608_06603726 WDR73 coding downstream 174042 6598548 ~ 6603830 (+)
CI01000006_06653186_06657164 NA coding downstream 228680 6653186 ~ 6657276 (+)
CI01000006_06658495_06666257 CHRDL2 coding downstream 233989 6658495 ~ 6666498 (+)
G44035 NA non-coding upstream 31492 6387715 ~ 6390438 (+)
G44012 NA non-coding upstream 136055 6285648 ~ 6285875 (+)
G44010 NA non-coding upstream 146696 6275005 ~ 6275234 (+)
G44009 NA non-coding upstream 148703 6272938 ~ 6273227 (+)
G43904 NA non-coding upstream 221961 6194169 ~ 6199969 (+)
G44072 NA non-coding downstream 47680 6472186 ~ 6472522 (+)
G44074 NA non-coding downstream 48681 6473187 ~ 6475341 (+)
G44136 NA non-coding downstream 223368 6647874 ~ 6650111 (+)
G44162 NA non-coding downstream 262813 6687319 ~ 6687577 (+)
CI01000006_06122278_06122736 NA other upstream 293255 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 312342 6104927 ~ 6109820 (+)
G43896 NA other upstream 650155 5770089 ~ 5771775 (+)
G41996 NA other upstream 1297781 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2685952 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 742283 7166778 ~ 7168925 (+)
G44872 NA other downstream 931846 7356352 ~ 7387884 (+)
G45178 NA other downstream 1197485 7607604 ~ 7683671 (+)
G45265 NA other downstream 1459361 7883867 ~ 7920355 (+)
G45336 NA other downstream 1594836 8019342 ~ 8021951 (+)

Expression


Co-expression Network