CI01000006_06598608_06603726 (WDR73)


Basic Information

Item Value
gene id CI01000006_06598608_06603726
gene name WDR73
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6598548 ~ 6603830 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06598608_06603726.mRNA
GTATAAATGAAACATTGGCACTGCAATCAACACAGCCTAAGAGGCTCAGACTGTAAAGCTATGAAGAAACTTGGCATGATTCTGTTTGTTACGTTGCTTGCACTTTTCACAGGGAATGTGCATAATGCTGAAGTGCAGATTCAGAATTGGACTTGTGGCTATGGAGGACTCTGCCGTCGCTTCTGTTTTGACCAAGAATACATTGTTAGTCACCATGGCTGTCCACGCAAATACAGATACAAAGACCTGCATCTATTTCAGCTGGAGCATCCGACAAAAGTAATAGAGTGGACGGGTGACAAAAGTATTTGTGTTGCAGGATACACTGGAACAAAAAGTGAAATCTTAGAGTTACTCCTGCCTCTTAAGTTATATGCAGGCGACAACCAGGGTCTTTGTGCAGAAAGAGACTTCAAAGTACAGCATGGTGGCTTTTCAGAGGAACCTGTTGAGTGTTTGATACATATCCCTGGAACGAGGTGTTTGGTGACTAGTGGAAGTTCTAGTTCAACGTTGCAGATTTGGGATATTGGAAGCGATGATAGTGATGTTATAAAAAGGACTGGAGTCATAAACCTCAAGAGCACATCAGCAAAAGGCATTAAAATAGCTCCTGGATTGATAGACGATCCAGCAGTTCTTCATGGTTCTTGTATAAGTGATGTTCAGCTGACAGAGATAGCAACAGGACGCGTTCTGTATACAGTTGGAAATGAGTCCTTAGATTCGGTGAGTGGCTTACAGTTTGTGAACGCTCATGTGTTTCTCATTTGTGCGAGCAATGGCACTCTGCTCATGGGTGACACAAGAGACCCCTCAACTGCTCATCATCCTCTGGAAGAGAGTAAGAGTGGTTTGCACTGGTCATTTGGGTTGAGGAGTGACAGCTTCCAGTCTGAACCTTCTACTGTCGCAAGACTCTCGTCCACCGGTCACATTCTGCTGTCAGATCTAAGAGATTTACAGAGTCCATTTTGTCAAACCCGACTAAATGTCCAACAGAGTCCACCAAATAATGACTTTCTGAAAGTTTCTTGGGCTCCTGTTCTTGACAGCTGTCTGTCTGTGTCTGGGTTTGATGGAACGGTACATATTTATAACACAACAAATTGGAGCACAGAAGTTCAGAGCCCTCAGCCAATTTTCTCACACAGAGGTCATGATATGTCACATGATGCAAAATACAGTGGTTCCCCAGCTGTTGTCACCACTCATTCTTGGCATCAGTCACGACCAAAAACTCTTCTTTCTGCAGCTACTGATGGATCTCTACATGTATGGGACTGGGTGGACAAAATCACTGACAGATGATCATTAGACAAAACTGTTCCGTGATACATGCATAAACTGTTCTGTGATACATTTCTGTACGAGTATATGAAGTAATATCAAACAATTTAATGACTATTAAGTCA

Function

symbol description
wdr73 Acts upstream of or within cerebellar Purkinje cell differentiation and midbrain development. Predicted to be located in cleavage furrow; cytoplasm; and cytoskeleton. Predicted to colocalize with cytosol and spindle pole. Human ortholog(s) of this gene implicated in Galloway-Mowat syndrome 1. Orthologous to human WDR73 (WD repeat domain 73).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06598608_06603726.mRNA False 1415 mRNA 0.43 9 6598548 6603830

Neighbor

gene id symbol gene type direction distance location
CI01000006_06438579_06447777 ELMOD1 coding upstream 149387 6438579 ~ 6449161 (+)
CI01000006_06432698_06437087 SLC35F2 coding upstream 160956 6432096 ~ 6437592 (+)
CI01000006_06319924_06332207 NA coding upstream 266341 6319924 ~ 6332207 (+)
CI01000006_06304760_06308641 SKP2 coding upstream 289285 6304179 ~ 6309263 (+)
CI01000006_06289413_06296642 NA coding upstream 301442 6289299 ~ 6297106 (+)
CI01000006_06653186_06657164 NA coding downstream 49356 6653186 ~ 6657276 (+)
CI01000006_06658495_06666257 CHRDL2 coding downstream 54665 6658495 ~ 6666498 (+)
CI01000006_06790435_06791964 NA coding downstream 186280 6790110 ~ 6792805 (+)
CI01000006_06800620_06801564 NA coding downstream 196530 6800360 ~ 6801622 (+)
CI01000006_06803516_06806038 NA coding downstream 199196 6803026 ~ 6806214 (+)
G44074 NA non-coding upstream 123207 6473187 ~ 6475341 (+)
G44072 NA non-coding upstream 126026 6472186 ~ 6472522 (+)
G44053 NA non-coding upstream 174042 6421930 ~ 6424506 (+)
G44035 NA non-coding upstream 208110 6387715 ~ 6390438 (+)
G44012 NA non-coding upstream 312673 6285648 ~ 6285875 (+)
G44136 NA non-coding downstream 44044 6647874 ~ 6650111 (+)
G44162 NA non-coding downstream 83489 6687319 ~ 6687577 (+)
G44164 NA non-coding downstream 84497 6688327 ~ 6688565 (+)
G44173 NA non-coding downstream 108869 6712699 ~ 6713471 (+)
G44180 NA non-coding downstream 163602 6767432 ~ 6767939 (+)
CI01000006_06122278_06122736 NA other upstream 469873 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 488960 6104927 ~ 6109820 (+)
G43896 NA other upstream 826773 5770089 ~ 5771775 (+)
G41996 NA other upstream 1474399 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2862570 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 562959 7166778 ~ 7168925 (+)
G44872 NA other downstream 752522 7356352 ~ 7387884 (+)
G45178 NA other downstream 1018161 7607604 ~ 7683671 (+)
G45265 NA other downstream 1280037 7883867 ~ 7920355 (+)
G45336 NA other downstream 1415512 8019342 ~ 8021951 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019555 wdr73 coding NC_007132.7 CM002905.2 21819878 ~ 21824285 (-)