CI01000006_06803516_06806038


Basic Information

Item Value
gene id CI01000006_06803516_06806038
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6803026 ~ 6806214 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06803516_06806038.mRNA
GTATATATTACGCAGGTTACGTTAGCTTACTCCGCAGCGGTTGGCGTATCGCTCGGTCTAAAATAGTCCGTCGTAGGCTACCGTAGTGATTCAGGGTAAGACAAAAGCACGGTGTGGAAGACGGATTTATGATGTGTTTGCTTATTATATAAATTTTGTACATTTTAAACAAAAAAAGTTACATAGTGTATTAATCATTCTTCTGACAGCTGTAATATTTGATAACATTTAATATCAATTATCTGTACACATTATATTTTATAACATGATGCATTTAAGTTACCCGTGGGCAATAAATCACAGCTATCAATAAATGTTATTACATAATAGCAGCATAAGCATGACTTGCACTTTCTTTTGTTCTTGACGTTTTTAAAGGAGGGGCTGCGCAGTGCAAGTGCGGAACATTTAAACACTACACAGAAGAGTGCGGATTCTTTATTTTCCTGACTTCATTTCTTCGCTTAACGGCAGATAATAGAAATCCACAATGTCCAAAAAAGTGGCTGTAGTTACAGGGGCAAATAAGGGCATCGGACTGGCAATTGTTAAAGGGCTGTGCAAGGCAGGTTTCAAAGGAGATATTCTCCTCACTGCACGGAATGAGAAACTGGGACAAGAGGCTATTGCTGGACTGCACTCTGAGGGGTGCAAAAACGTAATCTTCCATCAACTTGATATTTGTGACCAGGGAAGCTCTGAAAAACTCAAGAAGTTTCTAGAGGAGAAGTACGGTGGCCTGGATGTTCTTATCAACAACGCGGGAATTGCCTTCAAACACTCAGCACCAGATCCATTTGGAGAACAGGCTGAGGTGACCATGCGCACCAACTTCTGGGGAACGCTGTGGCTGAATCATAAAAGGCTCACTCGGTACAAACTCCGTCAGTTTGTCGTTTTATGCGAGATTTTGATGGGCTGTGGCCGTCAACAGGAAGTGACATTACCAAAAGGTGGGGCTTTGGCTCTTGTTCTTCTAAGATGGCTTTATCGCCTCTTGATGATACAGCTAAACCTGCATACACAAGTAGCAATTTTAACTTGTTCTATCAACCTCAAGACATACAAGATTTAATTTGACTTCACAAACCTGCTATTTTGAATTGGAAATCATCTTTATTACATCCACAGGCCACTTTCACCTGAAATCCTTGTTCCGCCTCTATGAATTAAATGGTAGAGAAAGTTTAATTTGTTATGCATACATTTCATTAATGTAATTGTCACAATATGAGGGTTGCAGCAGATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06803516_06806038.mRNA True 1251 mRNA 0.40 3 6803026 6806214

Neighbor

gene id symbol gene type direction distance location
CI01000006_06800620_06801564 NA coding upstream 1404 6800360 ~ 6801622 (+)
CI01000006_06790435_06791964 NA coding upstream 10221 6790110 ~ 6792805 (+)
CI01000006_06658495_06666257 CHRDL2 coding upstream 136528 6658495 ~ 6666498 (+)
CI01000006_06653186_06657164 NA coding upstream 145750 6653186 ~ 6657276 (+)
CI01000006_06598608_06603726 WDR73 coding upstream 199196 6598548 ~ 6603830 (+)
CI01000006_06825096_06826055 OR133-1 coding downstream 18735 6824949 ~ 6826452 (+)
CI01000006_06838948_06839904 NA coding downstream 32561 6838775 ~ 6840254 (+)
CI01000006_06847369_06848340 OR133-1 coding downstream 40804 6846954 ~ 6848711 (+)
CI01000006_06853100_06858970 OR133-7 coding downstream 46617 6852831 ~ 6859433 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding downstream 92196 6898410 ~ 6913946 (+)
G44180 NA non-coding upstream 35087 6767432 ~ 6767939 (+)
G44173 NA non-coding upstream 89555 6712699 ~ 6713471 (+)
G44164 NA non-coding upstream 114461 6688327 ~ 6688565 (+)
G44162 NA non-coding upstream 115449 6687319 ~ 6687577 (+)
G44136 NA non-coding upstream 152915 6647874 ~ 6650111 (+)
G44196 NA non-coding downstream 26787 6833001 ~ 6833270 (+)
G44210 NA non-coding downstream 42728 6848942 ~ 6849157 (+)
G44745 NA non-coding downstream 139441 6945655 ~ 6963524 (+)
G44755 NA non-coding downstream 164290 6970504 ~ 6970816 (+)
CI01000006_06122278_06122736 NA other upstream 674351 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 693438 6104927 ~ 6109820 (+)
G43896 NA other upstream 1031251 5770089 ~ 5771775 (+)
G41996 NA other upstream 1678877 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3067048 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 360575 7166778 ~ 7168925 (+)
G44872 NA other downstream 550138 7356352 ~ 7387884 (+)
G45178 NA other downstream 815777 7607604 ~ 7683671 (+)
G45265 NA other downstream 1077653 7883867 ~ 7920355 (+)
G45336 NA other downstream 1213128 8019342 ~ 8021951 (+)

Expression


Co-expression Network