CI01000006_06192438_06193928


Basic Information

Item Value
gene id CI01000006_06192438_06193928
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6192438 ~ 6194004 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06192438_06193928.mRNA
GGTATCCAATGCCACCAAATATAAGCATCAGTAGGATCATTTACAACAGTCGTCAACGGACAGATGTTGACCTAGAGTGGCAGCTCCAGACTGATGGTGACCTCACCGGCTTCTTTATAGAACGCCAGAGGCTCCCTGAACCTGTGAAGAAAAGAAACGGTGGTCTTCCCTGGCAGAAATTGGTAGATCTGGAACCTGATTCCCGAAGCTTCCAAATCAGCAATCTGGATCCCACAGGAACCTATGCATTTCGCATTACTGCCATCAACCATCGCACCATTGGAAACCCTTCAGAGACAAAGAGCCCAGCCGACCCTCCATTCAATGCCTACCCAGCTGTGATCGGGGCAGCCATTGGGGGCATGATCATAGCCACAATAATCACTGTACTGCTCTTCATGTATGTGGTACGGAACCGCAACAATAACCCACGGCTTCATGACTTGATATTTGGAAGGCAGAATAGCCAGTCTAGAGAGAACATTAACTTCCCTGAAGATGAGGTTCCTGGAACAGCAGAAGGGGAGAATGGTACAGGACAGCCAAGTTCATCAGCTAGTCCAGCAGCATCAATGGCACTGCCAAGGCCAACCGCAACACCTACAAACCTTCCCCCTGGCGAGGAGCCAGTCAACGTAACTATTACTGTCATGGCCTCAAGCTAAAGACAAGGCTGATCATAATCATGTTTGTTACCATAAATTTACTACTGGGGGAATCAGAAACACATTCTCATCATCA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06192438_06193928.mRNA True 741 mRNA 0.48 5 6192438 6194004

Neighbor

gene id symbol gene type direction distance location
CI01000006_06171151_06179449 PVRL1A coding upstream 11063 6171151 ~ 6181375 (+)
CI01000006_06146799_06148260 NA coding upstream 44033 6146729 ~ 6148405 (+)
CI01000006_06142449_06142925 GIG2I coding upstream 49370 6142299 ~ 6143068 (+)
CI01000006_06136379_06136891 NA coding upstream 55181 6135816 ~ 6137257 (+)
CI01000006_06122278_06122736 NA coding upstream 69687 6122035 ~ 6122751 (+)
CI01000006_06201072_06204390 CFAP53 coding downstream 7068 6201072 ~ 6204695 (+)
CI01000006_06225846_06258303 MYO5B coding downstream 31842 6225846 ~ 6258515 (+)
CI01000006_06267132_06269409 NA coding downstream 73128 6267132 ~ 6270057 (+)
CI01000006_06289413_06296642 NA coding downstream 95295 6289299 ~ 6297106 (+)
CI01000006_06304760_06308641 SKP2 coding downstream 110175 6304179 ~ 6309263 (+)
G43908 NA non-coding upstream 37711 6151873 ~ 6154727 (+)
G43990 NA non-coding upstream 71703 6120358 ~ 6120735 (+)
G43988 NA non-coding upstream 82032 6110166 ~ 6110406 (+)
G43970 NA non-coding upstream 119732 6072397 ~ 6072706 (+)
G43887 NA non-coding upstream 388277 5792917 ~ 5804161 (+)
G43904 NA non-coding downstream 165 6194169 ~ 6199969 (+)
G44009 NA non-coding downstream 78934 6272938 ~ 6273227 (+)
G44010 NA non-coding downstream 81001 6275005 ~ 6275234 (+)
G44012 NA non-coding downstream 91644 6285648 ~ 6285875 (+)
G44035 NA non-coding downstream 193711 6387715 ~ 6390438 (+)
CI01000006_06104927_06109730 NA other upstream 82850 6104927 ~ 6109820 (+)
G43896 NA other upstream 420663 5770089 ~ 5771775 (+)
G41996 NA other upstream 1068289 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 2456460 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 972785 7166778 ~ 7168925 (+)
G44872 NA other downstream 1162348 7356352 ~ 7387884 (+)
G45178 NA other downstream 1427987 7607604 ~ 7683671 (+)
G45265 NA other downstream 1689863 7883867 ~ 7920355 (+)
G45336 NA other downstream 1825338 8019342 ~ 8021951 (+)

Expression


Co-expression Network