CI01000006_06309877_06316645 (NADK2)


Basic Information

Item Value
gene id CI01000006_06309877_06316645
gene name NADK2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6309279 ~ 6316645 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_06309877_06316645.mRNA
ACCGCCGCGTGTAAAGTTGCTTCGCAAGCTGAATGTGGCTTCAAACCTGCGAAGGTGGCGGTTGTGACTAAGACCACACGATATGAATTCGAGCAGCAGAGATATCGCTATTCGGGACTGTCGGAGGAGGATCTTAAACAGCTGCTTGCCCTAAAAGGATCCAGTTACATTGGACTTCTGGAGAGACACAATATACACACCCTTAATGTTGGACAGATTGTGGACAGCCTACAGAAACAGGGGATTGAGGTGCGCGTTGTAAAAAGAGGAGAGTATGATGAGGACACAGTACGATGGGCTGATGCCATTATCTCTGCTGGAGGTGATGGGACCATGCTACTAGTTGCCAGTAAAGTGTATGATAAGAACAAACCTGTATTGGGGGTCAATACAGACCCAGAAAGGTCAGAGGGTCACCTGTGTTTACCTGTGCGCTATACACACGCCTTTTCTGAGGCCTTACAGAAACTCAGGAAGGGTGAGTTCAGGTGGCAGTGGCGTCAGCGTATCCGTATGTACTTGGAGGGCACCGGGATCAACCCGACTCCAGTGGACCTGCATGAGCTGCAGCTGAGCCTCGAACAGCACAGCAAAGCGCACCGTATCACTACAGAGACACAGCGCTGTACGACACACGACAGTTCTGAAAGTCCTCACCTACTCCCTGTCCGAGGGCTCAACGAGATCTTCATCGGGGAGTCCCTGTCCTCCAGGGTGAAGTATAAATCCTTCAAACCCCATCTTACCCTCTCGCTTCATAGGGCTTCATACTATGAAATCTCCATTGATGACGGGCCGTGGGAGAAGCAGAAGAGTTCAGGGCTTAGCATTTGCACTGGAACTGGATCTAAAGCCTGGTCCTACAATATTAATAAGCTTGTGGAGCAGGCAGTGGAGGATGTCCTTAGAATAGGTAAAACAAAAACGGGTTTGGATATTCCTCTAAATCGGGAGTTCATTGAGAGCGTGACTGAAACATACAATGAGTCTCTAATCTTTGGCCCAGAGGAGGACAAACTTTTCTTCAGTATAAGGGAGCCTATAGTCAACAGAGTATTTTCCAATAGCCGACAAAGAGGTTTTGCCAAAAAGGTTTGTGTCCGCTCAAGGTGCTGGGATGCCTGCATGGTGGTGGATGGTGGGACTTCCTTCGAGTTTAATGATGGTGCCATTGCTACCATCAGCTTAAATGAGGAGGACCTGTTGCGAACTGTCATTCTTGATTAAATCCTTTGATACATCAAACTGTTGCTCGATGCGCTTGTATATTTATTAAGGACTGAAGAATTGTCTAAAGATGGACAGTGGGATCTTTAAGCACTGAGTTTTAAGGGATTATGGGGTTTGCAGAAGAAATCTGGATTTCACACTTCTGTAGTCAATGCTTGTTTAAACAACCCTCTTGGTTGCAGCCCTCAGAAATGAGCATTTTTTTTCCTAGACGCACCAGCTTTAGATTGTTTAAATATACCAATAGTGATGTGACAGAGCCAGAAATGCCCATGTTGACTTTTTTTACTTATTTATAATACATACTTTTGAACACAGTTGTGCCAAACATGCACAAGTATTTTATTAATGTAGAAGTCAATACTTTATGAAACTGCAACAAAAAAAATTATATTTTAATGTTTCACAATAGGGTTTTTGGGTGCAGCGTTCAACTGTACTCCATCAGGTCAGCCATTGTGCAAAATTTTGTAAAACCATTTTCTTTCTTTATGCATTTTACTGCATTTACATTTGTTGGAAAGTATTGTGTGATTTGTGCAGTGGTATATAACACTGAAACAGATCAACTCACATGAGGATGACTTTAAATAAA

Function

symbol description
nadk2 Predicted to enable NAD+ kinase activity. Predicted to be involved in NAD metabolic process. Predicted to act upstream of or within NADP biosynthetic process and phosphorylation. Predicted to be active in mitochondrion. Orthologous to human NADK2 (NAD kinase 2, mitochondrial).

GO:

id name namespace
GO:0019674 NAD metabolic process biological_process

KEGG:

id description
K00858 ppnK, NADK; NAD+ kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_06309877_06316645.mRNA True 1825 mRNA 0.44 12 6309279 6316645

Neighbor

gene id symbol gene type direction distance location
CI01000006_06276720_06284605 LMBRD2B, LMBRD2 coding downstream 24127 6275595 ~ 6285152 (-)
CI01000006_06272106_06273111 CAPSL, CAPSLB coding downstream 36168 6272071 ~ 6273111 (-)
CI01000006_06261946_06262932 NA coding downstream 46301 6261556 ~ 6262978 (-)
CI01000006_06194768_06199541 CHEK1 coding downstream 109738 6194494 ~ 6199541 (-)
CI01000006_06154160_06156372 NA coding downstream 152907 6154098 ~ 6156372 (-)
CI01000006_06334522_06363794 MYO7A, MYO7AB coding upstream 17094 6333739 ~ 6366270 (-)
CI01000006_06382586_06409914 CAPN5B, CAPN5, CAPN5A coding upstream 65179 6381824 ~ 6409914 (-)
CI01000006_06418196_06429736 CUL5B, CUL5, CUL5A coding upstream 101363 6418008 ~ 6430813 (-)
CI01000006_06456792_06551677 GRIA4, GRIA4A, GRIA4B coding upstream 140147 6456792 ~ 6551677 (-)
CI01000006_06604787_06615427 NEU3.3, NEU3.4 coding upstream 287502 6604145 ~ 6617712 (-)
G44606 NA non-coding downstream 11417 6297540 ~ 6297862 (-)
G44590 NA non-coding downstream 12209 6292449 ~ 6297070 (-)
G44568 NA non-coding downstream 43372 6264944 ~ 6265907 (-)
G44570 NA non-coding downstream 103863 6205064 ~ 6205416 (-)
G44587 NA non-coding upstream 128820 6445465 ~ 6450083 (-)
G44641 NA non-coding upstream 266847 6583492 ~ 6587138 (-)
CI01000006_06679176_06684406 POLD3 non-coding upstream 291147 6679176 ~ 6685603 (-)
G44677 NA non-coding upstream 370727 6687372 ~ 6687596 (-)
CI01000006_04560607_04560993 NA other downstream 1747211 4559509 ~ 4562068 (-)
G43549 NA other downstream 1953851 4352510 ~ 4355428 (-)
G43102 NA other downstream 3375295 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 3683093 2624436 ~ 2626776 (-)
G42934 NA other downstream 3727073 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 656579 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 1186500 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 4166211 10453613 ~ 10484006 (-)
G47658 NA other upstream 4714266 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 5333718 11650363 ~ 11654424 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018898 nadk2 coding NC_007132.7 CM002905.2 22330005 ~ 22346723 (+)
bowfin (Amia calva) AMCG00010063 NA coding CM030129.1 CM030129.1 12085846 ~ 12094799 (+)