G44606


Basic Information

Item Value
gene id G44606
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6297540 ~ 6297862 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50686
CCCAGTCGTAAGGAAATTTGAGAAAAGATGAAATACGGGACAAAACATGATTTTTTCTTAATAAGTCGGGACACTAAAAATAGAGCTGAAATACGACTGTCCCGGGAAAAACGTCTCAGAAATATCAACCTGGTTGTGTTTTTTGTTTTTTCACACACAATATACTCTGTACTAAATTGCAAAAAAATAATCATTAATGTTTAAAATTGAGATTTAGAAAAATACAATGATTAACAAATTATATGACATCCAATTATATTCCCAGTAAACTTAGGGTGACCAGACGTCCCGTTTTTCCCAGCATATCCGAGCAAGGCATCGTT

Function

NR:

description
PREDICTED: rootletin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50686 True 323 lncRNA 0.34 1 6297540 6297862

Neighbor

gene id symbol gene type direction distance location
CI01000006_06276720_06284605 LMBRD2B, LMBRD2 coding downstream 12388 6275595 ~ 6285152 (-)
CI01000006_06272106_06273111 CAPSL, CAPSLB coding downstream 24429 6272071 ~ 6273111 (-)
CI01000006_06261946_06262932 NA coding downstream 34562 6261556 ~ 6262978 (-)
CI01000006_06194768_06199541 CHEK1 coding downstream 97999 6194494 ~ 6199541 (-)
CI01000006_06154160_06156372 NA coding downstream 141168 6154098 ~ 6156372 (-)
CI01000006_06309877_06316645 NADK2 coding upstream 11417 6309279 ~ 6316645 (-)
CI01000006_06334522_06363794 MYO7A, MYO7AB coding upstream 35877 6333739 ~ 6366270 (-)
CI01000006_06382586_06409914 CAPN5B, CAPN5, CAPN5A coding upstream 83962 6381824 ~ 6409914 (-)
CI01000006_06418196_06429736 CUL5B, CUL5, CUL5A coding upstream 120146 6418008 ~ 6430813 (-)
CI01000006_06456792_06551677 GRIA4, GRIA4A, GRIA4B coding upstream 158930 6456792 ~ 6551677 (-)
G44590 NA non-coding downstream 470 6292449 ~ 6297070 (-)
G44568 NA non-coding downstream 31633 6264944 ~ 6265907 (-)
G44570 NA non-coding downstream 92124 6205064 ~ 6205416 (-)
G44557 NA non-coding downstream 104229 6193017 ~ 6193311 (-)
G44587 NA non-coding upstream 147603 6445465 ~ 6450083 (-)
G44641 NA non-coding upstream 285630 6583492 ~ 6587138 (-)
CI01000006_06679176_06684406 POLD3 non-coding upstream 309930 6679176 ~ 6685603 (-)
G44677 NA non-coding upstream 389510 6687372 ~ 6687596 (-)
CI01000006_04560607_04560993 NA other downstream 1735472 4559509 ~ 4562068 (-)
G43549 NA other downstream 1942112 4352510 ~ 4355428 (-)
G43102 NA other downstream 3363556 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 3671354 2624436 ~ 2626776 (-)
G42934 NA other downstream 3715334 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 675362 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 1205283 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 4184994 10453613 ~ 10484006 (-)
G47658 NA other upstream 4733049 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 5352501 11650363 ~ 11654424 (-)

Expression


Co-expression Network