G41808


Basic Information

Item Value
gene id G41808
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4183075 ~ 4183315 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47454
ATTGGCCAATAGCTGTGTTTTATTCACGGTAAAACACGGCTATGACCGCTTCATCCAACAGTTCTGTGTATCACTACACAACACCCTTAGCAACCACTCTTAGCAACGTAAACTGTTTGTTCTTAATTGATATTGTTCATTGAAGCTTACTGTATTATGTAGAAGAGTATTGTGAGAAAGAGATCGAGTAAGCGAGTTTATTACCTGCATTCAGATTTAGCATTTTCCTTCAGGTCAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47454 True 241 lncRNA 0.39 1 4183075 4183315

Neighbor

gene id symbol gene type direction distance location
CI01000006_04145907_04147044 SDF2 coding upstream 33901 4145414 ~ 4149174 (+)
CI01000006_04124413_04127728 RAB34 coding upstream 55304 4124413 ~ 4127771 (+)
CI01000006_04107814_04117460 TLCD1 coding upstream 65413 4107814 ~ 4117662 (+)
CI01000006_04100433_04105606 NIPAL4 coding upstream 77458 4100062 ~ 4105617 (+)
CI01000006_04050327_04089669 GRIA1B coding upstream 91752 4048960 ~ 4091323 (+)
CI01000006_04240020_04242545 WBSCR27 coding downstream 56705 4240020 ~ 4242978 (+)
CI01000006_04257954_04258376 NA coding downstream 73508 4256823 ~ 4258506 (+)
CI01000006_04268235_04268891 CLDNC coding downstream 82321 4265636 ~ 4269257 (+)
CI01000006_04272263_04272907 CLDNH coding downstream 88806 4272121 ~ 4273578 (+)
CI01000006_04284763_04290722 ABHD11 coding downstream 101021 4284336 ~ 4291717 (+)
G41807 NA non-coding upstream 3823 4179000 ~ 4179252 (+)
G41806 NA non-coding upstream 10454 4172349 ~ 4172621 (+)
G41804 NA non-coding upstream 22710 4160081 ~ 4160365 (+)
G41767 NA non-coding upstream 38451 4142087 ~ 4144624 (+)
G41763 NA non-coding upstream 59849 4121278 ~ 4123226 (+)
G41810 NA non-coding downstream 5005 4188320 ~ 4188545 (+)
G41777 NA non-coding downstream 5879 4189194 ~ 4189818 (+)
G41822 NA non-coding downstream 45119 4228434 ~ 4228792 (+)
G41823 NA non-coding downstream 45522 4228837 ~ 4229231 (+)
G41835 NA non-coding downstream 58207 4241522 ~ 4256763 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 447097 3734554 ~ 3736035 (+)
G41591 NA other upstream 1343654 2836167 ~ 2839421 (+)
G41424 NA other upstream 1522505 2645662 ~ 2660570 (+)
G41170 NA other upstream 2487254 1692065 ~ 1695821 (+)
G40768 NA other upstream 3690049 488407 ~ 493026 (+)
G41996 NA other downstream 933891 5117206 ~ 5124149 (+)
G43896 NA other downstream 1586774 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 1925169 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 1938720 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 2983474 7166778 ~ 7168925 (+)

Expression


Co-expression Network