G89322


Basic Information

Item Value
gene id G89322
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 9081282 ~ 9082106 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU120130
atttctttaaatgatgttatgtaataacaaaagtttgggagaaggaccacgcccgTCTTCCTCGGCCGGCCTCGCCGGCCCTGGGCCCCTCTCTCCTAGTAAGTCCCAGCCTCCTCGCATGTCCGATTGGACTGTTGTTAAGCTGCAGCGGGTTTTTGAAGGACCGCGGCGTCCCTTTCCCCCGTTCTGCTCCAAAAGCGGAACTTTTCACTGAACCTCTGAACAGCGCACATGAGCCGCACCGGCGTCGCGGCCTGATGACGTCACCCGCTCAACTCGCCACCGCTGCAGCTCTCGCGCccctggcgcggcaccaacttcgcctcagcgcctcgtctctcgtctctctcgtctctcttcccctctgtcgtccaactccccctccctctgtcgtccaactccccctccctctgtcgtccaactccccc

Function

GO:

id name namespace
GO:0007606 sensory perception of chemical stimulus biological_process
GO:0007608 sensory perception of smell biological_process

KEGG:

id description
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU120130 True 428 lncRNA 0.61 2 9081282 9082106

Neighbor

gene id symbol gene type direction distance location
LOC103031295 NA coding downstream 65575 9012446 ~ 9015707 (-)
LOC103045042 LOC108242159 coding downstream 185844 8812404 ~ 8895438 (-)
LOC103046449 NA coding downstream 287457 8738885 ~ 8793825 (-)
LOC103046152 LOC103046152,LOC108430057,LOC108272427,LOC107584782,LOC107705557,LOC107660037 coding downstream 347395 8695370 ~ 8733887 (-)
nudt15 LOC107705561,LOC107584789 coding downstream 536677 8541475 ~ 8544605 (-)
LOC103040550 NA coding upstream 26657 9108763 ~ 9144163 (-)
mrs2 mrs2,LOC107686945,LOC107596696,LOC107748556,LOC106606027,LOC106595277 coding upstream 66511 9148617 ~ 9154619 (-)
cep192 NA coding upstream 89454 9171560 ~ 9195276 (-)
LOC103040854 LOC103040854 coding upstream 116280 9198386 ~ 9199959 (-)
LOC103044039 zgc:92912,vamp1,LOC103044039,LOC108268517,LOC108429010,LOC106529171 coding upstream 407460 9489566 ~ 9496969 (-)
G89299 NA non-coding downstream 62854 9008103 ~ 9018428 (-)
G89288 NA non-coding downstream 130994 8949968 ~ 8950288 (-)
G89179 NA non-coding downstream 542759 8537835 ~ 8538523 (-)
G89176 abi2 non-coding downstream 567443 8508887 ~ 8513839 (-)
G89169 NA non-coding downstream 607542 8472574 ~ 8473740 (-)
G89328 NA non-coding upstream 9517 9091623 ~ 9130120 (-)
G89331 NA non-coding upstream 50077 9132183 ~ 9138868 (-)
G89333 NA non-coding upstream 72655 9154761 ~ 9156267 (-)
G89399 NA non-coding upstream 239437 9321543 ~ 9321887 (-)
G89400 NA non-coding upstream 262045 9344151 ~ 9344367 (-)
G88789 NA other downstream 1838712 7241711 ~ 7242570 (-)
LOC103026131 LOC108431006 other downstream 1866043 7103571 ~ 7215239 (-)
G88779 NA other downstream 1963156 7117661 ~ 7118126 (-)
vstm2a vstm2a other downstream 2348618 6676275 ~ 6732664 (-)
G88465 NA other downstream 4485957 4595058 ~ 4595325 (-)
LOC103029706 LOC108429024,LOC108268385,LOC107749226,LOC107685514 other upstream 702517 9784623 ~ 9854099 (-)
G89690 zyx,LOC108428910 other upstream 812719 9894825 ~ 9901700 (-)
G89708 gapdh,LOC107550818 other upstream 879176 9961282 ~ 9964606 (-)
LOC103025178 LOC108429038 other upstream 929711 10011817 ~ 10042853 (-)
G89751 NA other upstream 1141414 10223520 ~ 10224663 (-)

Expression


Co-expression Network