boll


Basic Information

Item Value
gene id boll
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 7746874 ~ 7760984 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022673444.1
AAGGGAATGTTCCATTTCTGCTGATTGCTGGGGGAACTGACCCCAACACTCtaactgttttaatttaataacttgTTTAATTTTCTGGTGCAAAATATCTCTGTTATGTATAAAACAACTATTagattattttgtttctgtgttaAAGTTGTAGAGGGGCTGTATTTGAAATGGTTCTGGTTGTGTAAGTTTTGGGCTCTGCTGTAGTTCAGCCAGTGTTTTGGTGACCGctgtctcgttttttttttttcttattttgtagCTGATTTGAGGTCTAGTTGAAGCTTTAGGGTCCTTATCGCTTCTAAAGGAGTGCTGTTCACTCCGCGGCCGAGTTTATGAAGTGATTCTGCTGCTGATCTCCGCAAGCCGACCCCCGTCCAGCCCGAGAGATGGAGAACGATGCCGGGACCCAGACCAGCTCTCCATCCACCAGTCCGGCTCCTGTCGAAATAAGTAACACTCTGCACCAAGCTTCCCATACCGGCACAGTCATCCCAAACCGGATCTTTGTAGGGGGGATCGGTGGTAAAgCTAAGGAAAATGATCTAAGGTGTTTTTTCTCTGAATACGGAGTGATCAGAGAAGTGAATATTGTTACTGATCGAGACGGAATATCAAAGGGATATGGCTTTGTTACATTTGAAACTCAGGAAGATGCACAGAAAATTCTACATGATGCTGACCGACTTTCTTTTCGTGATAAAAGGATAAACGTGGGCCAGGCATTCCGCAAACAACTGAAAGGACACTACAGCTATACTGCGGATACTCAGGGTTCATCTATGGCTTATCAAGCTCCTTTTGGCACCACATACCTGACCACCCCTACTGGATATCCCTACACCTACCACAATGGAGTGGCCTACTTCCACACACCAGAGCCCAACACACTGAGCCCCTCACACTGGCATGCTCCACCCCACACGATGTCTGGATCGTCCGTCATGGTGACCCACTCTGCCTCTTCCATCTGCATCCCACAACCCTACCACAATTCACAGGCTTCTTCTCAGTATGTGCCCGGACACGTGCCATGGACCATTCCTCAGGTAGAGGCTTCTTCACAGTATGTGTCTGGACATGTGCCATGGACTATTCCTCAGGTAGAGACCTCCGTCCCTGTGAATCCAAGTTCTTTATCATGCATCCAGCCTGCTGAGGTAATGTACCAGCCCATGGAGATGCCAGCAGAGAATTGGTGTTTCCAGTCAGCCATGCCATTAATGGAGGCTACAATTCCTGAGGAGCAAAGATTTCACCCAGTCAGACGAAGCTTCTCCCGCTCTGCGGCCCACTTAAAGCCCAGGTACCACCACGGCCATCGTTACACTCACCTGCACAAGAACTACCGCCCGGATGTGTACCAGGCATTCCCAGCATCCCCAGCTCCTGCTTCTTCTCCTGGCCTGGAGATGCCGATATAGAGACCTTTTCCCAGCTCCTTTTCTGTGTTCACACTAAGCTCTAACCACACCTTACTCCAAATCTCTGACCAACCTAACCCTACAGAAATAAGCTTTTACCAAACACAGACTTAGACCTTAATAAGTCTATACTATAAAGAACATGCTCTCTACCAGGCCTACACTACAGCTGGTCCTGACTGTACACACAGAAATACTGCATCTAAAGACAATCGAGGTGATAACAGTCTCTCAACCAGTAAATGTGCCTTAAATAACAAGTAATGACTTTTGGAAATAACTATATTATGGCAGATTTATTTGACTTTATAAGCCTGTTGAATTCATTTATTAGGCAACCTAGactattcactcactcactgttgtatgtaatatctaaaataattgtttaatagtaatagtaatagtaaaacaagaaagagcacagtttaatctgttaaaagagactttttgaaaaaaaaaagaggaatatTTTCCCTCACAATATAACCATCTTTGTAATGTCATTGCAGCTTTGCAAAGATGTCATGGAAgtgatattataaaaaataaattttacatttactcatTTGAGTATCAAAAATGACCTTCGAAATTAACAGTGAATTCAGCCCTGTGGAATATACTatgcataaaaaatgaaaatatctgGGTTACAATATATTCAAGATTTGATTGTACTTAATGTTCAACTTAATGTTTCTATTCTTAAACCAGTGgtctccctccctcctcctgGAGATTTACCTTGTTAGAGGTTTTAGCTCCAATCACATCAAACACAATACATTTCACATTTACAACCAAGAAGTTCTGTACACAGATATCAAATCGATCTGGTGAGGTGGATTGAGGAAGAAATGAAAGTCTGCATAAGGTAGTTCTCCAGGAGCAGGGTAAAGACCACTGGCTTTTAAACTCACTGTGCTAAACACAATGTTGAGTAGTGCATAGAAAAAGATGTTCAACTACCAGACATTCAGTAAATGCCAAGTTAGCCAGTCCATATGTTTACTAAGACAGACTCCATAAACTACCAGTGCCTTCAGGAAATAGTGCACATGCTCTGGATGTTACTGCTTTTCTACTTTTATACAAAAAGAATGATGTCATCGCattcttttttatatactttatagtttttaagtaaCTCTCGATATTGCTATACAATTTTCTTACATCACTGCAGTCACACTAATCTAAGATCAGCTCCTCCAACCAACCACActtacatatttaataaaacaaattaaacaatcTATCTATATGACAAATTATATCTGCATATATGTAGTCTGTCTTTTTAGCATTCCGGTTTAGAAATCTACTC
>XM_022673446.1
AAGGGAATGTTCCATTTCTGCTGATTGCTGGGGGAACTGACCCCAACACTCtaactgttttaatttaataacttgTTTAATTTTCTGGTGCAAAATATCTCTGTTATGTATAAAACAACTATTagattattttgtttctgtgttaAAGTTGTAGAGGGGCTGTATTTGAAATGGTTCTGGTTGTGTAAGTTTTGGGCTCTGCTGTAGTTCAGCCAGTGTTTTGGTGACCGctgtctcgttttttttttttcttattttgtagCTGATTTGAGGTCTAGTTGAAGCTTTAGGGTCCTTATCGCTTCTAAAGGAGTGCTGTTCACTCCGCGGCCGAGTTTATGAAGTGATTCTGCTGCTGATCTCCGCAAGCCGACCCCCGTCCAGCCCGAGAGATGGAGAACGATGCCGGGACCCAGACCAGCTCTCCATCCACCAGTCCGGCTCCTGTCGAAATAAGTAACACTCTGCACCAAGCTTCCCATACCGGCACAGTCATCCCAAACCGGATCTTTGTAGGGGGGATCGGTGGTAAAgCTAAGGAAAATGATCTAAGGTGTTTTTTCTCTGAATACGGAGTGATCAGAGAAGTGAATATTGTTACTGATCGAGACGGAATATCAAAGGGATATGGCTTTGTTACATTTGAAACTCAGGAAGATGCACAGAAAATTCTACATGATGCTGACCGACTTTCTTTTCGTGATAAAAGGATAAACGTGGGCCAGGCATTCCGCAAACAACTGAAAGGACACTACAGCTATACTGCGGATACTCAGGGTTCATCTATGGCTTATCAAGCTCCTTTTGGCACCACATACCTGACCACCCCTACTGGATATCCCTACACCTACCACAATGGAGTGGCCTACTTCCACACACCAGAGCCCAACACACTGAGCCCCTCACACTGGCATGCTCCACCCCACACGATGTCTGGATCGTCCGTCATGGTGACCCACTCTGCCTCTTCCATCTGCATCCCACAACCCTACCACAATTCACAGGCTTCTTCTCAGTATGTGCCCGGACACGTGCCATGGACCATTCCTCAGGTAGAGGCTTCTTCACAGTATGTGTCTGGACATGTGCCATGGACTATTCCTCAGACCTCCGTCCCTGTGAATCCAAGTTCTTTATCATGCATCCAGCCTGCTGAGGTAATGTACCAGCCCATGGAGATGCCAGCAGAGAATTGGTGTTTCCAGTCAGCCATGCCATTAATGGAGGCTACAATTCCTGAGGAGCAAAGATTTCACCCAGTCAGACGAAGCTTCTCCCGCTCTGCGGCCCACTTAAAGCCCAGGTACCACCACGGCCATCGTTACACTCACCTGCACAAGAACTACCGCCCGGATGTGTACCAGGCATTCCCAGCATCCCCAGCTCCTGCTTCTTCTCCTGGCCTGGAGATGCCGATATAGAGACCTTTTCCCAGCTCCTTTTCTGTGTTCACACTAAGCTCTAACCACACCTTACTCCAAATCTCTGACCAACCTAACCCTACAGAAATAAGCTTTTACCAAACACAGACTTAGACCTTAATAAGTCTATACTATAAAGAACATGCTCTCTACCAGGCCTACACTACAGCTGGTCCTGACTGTACACACAGAAATACTGCATCTAAAGACAATCGAGGTGATAACAGTCTCTCAACCAGTAAATGTGCCTTAAATAACAAGTAATGACTTTTGGAAATAACTATATTATGGCAGATTTATTTGACTTTATAAGCCTGTTGAATTCATTTATTAGGCAACCTAGactattcactcactcactgttgtatgtaatatctaaaataattgtttaatagtaatagtaatagtaaaacaagaaagagcacagtttaatctgttaaaagagactttttgaaaaaaaaaagaggaatatTTTCCCTCACAATATAACCATCTTTGTAATGTCATTGCAGCTTTGCAAAGATGTCATGGAAgtgatattataaaaaataaattttacatttactcatTTGAGTATCAAAAATGACCTTCGAAATTAACAGTGAATTCAGCCCTGTGGAATATACTatgcataaaaaatgaaaatatctgGGTTACAATATATTCAAGATTTGATTGTACTTAATGTTCAACTTAATGTTTCTATTCTTAAACCAGTGgtctccctccctcctcctgGAGATTTACCTTGTTAGAGGTTTTAGCTCCAATCACATCAAACACAATACATTTCACATTTACAACCAAGAAGTTCTGTACACAGATATCAAATCGATCTGGTGAGGTGGATTGAGGAAGAAATGAAAGTCTGCATAAGGTAGTTCTCCAGGAGCAGGGTAAAGACCACTGGCTTTTAAACTCACTGTGCTAAACACAATGTTGAGTAGTGCATAGAAAAAGATGTTCAACTACCAGACATTCAGTAAATGCCAAGTTAGCCAGTCCATATGTTTACTAAGACAGACTCCATAAACTACCAGTGCCTTCAGGAAATAGTGCACATGCTCTGGATGTTACTGCTTTTCTACTTTTATACAAAAAGAATGATGTCATCGCattcttttttatatactttatagtttttaagtaaCTCTCGATATTGCTATACAATTTTCTTACATCACTGCAGTCACACTAATCTAAGATCAGCTCCTCCAACCAACCACActtacatatttaataaaacaaattaaacaatcTATCTATATGACAAATTATATCTGCATATATGTAGTCTGTCTTTTTAGCATTCCGGTTTAGAAATCTACTC

Function

GO: NA

KEGG:

id description
K24979 BOLL; protein boule-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022673444.1 True 2757 mRNA 0.41 11 7746874 7760984
XM_022673446.1 False 2751 mRNA 0.41 11 7746874 7760984

Neighbor

gene id symbol gene type direction distance location
kynu kynu,LOC107558516 coding downstream 11417 7706002 ~ 7735457 (-)
LOC103025511 LOC108441709,LOC108271601 coding downstream 48862 7643056 ~ 7698012 (-)
reck reck,LOC108441710,LOC106590283,LOC106579676,LOC107655684 coding downstream 110566 7557482 ~ 7636308 (-)
LOC103025816 NA coding downstream 196493 7535978 ~ 7550381 (-)
LOC103034175 tgfbr1,tgfbr1b,LOC108441711,LOC107757190,LOC105890151,LOC106590284 coding downstream 232286 7429999 ~ 7514588 (-)
iqcb1 NA coding upstream 100451 7861435 ~ 7873399 (-)
ccdc14 NA coding upstream 113942 7874926 ~ 7885865 (-)
LOC103027002 LOC108430032,LOC107705485,LOC107706665 coding upstream 324585 8085569 ~ 8115611 (-)
map3k2 map3k2,LOC107660022,LOC107677576,LOC107581346,LOC107584801 coding upstream 364562 8125546 ~ 8144999 (-)
LOC103026207 cyp27c1,LOC108430031,LOC108272716,LOC107677575,LOC107706664 coding upstream 388485 8149469 ~ 8158442 (-)
G88923 NA non-coding downstream 104096 7598802 ~ 7642778 (-)
G88833 NA non-coding downstream 331389 7415058 ~ 7415485 (-)
G88824 NA non-coding downstream 364777 7325465 ~ 7382097 (-)
G88781 NA non-coding downstream 569260 7175374 ~ 7177614 (-)
G88780 NA non-coding downstream 597905 7131763 ~ 7148969 (-)
G89035 NA non-coding upstream 308420 8069404 ~ 8069620 (-)
G89029 NA non-coding upstream 314900 8075884 ~ 8079057 (-)
G89036 NA non-coding upstream 318080 8079064 ~ 8079780 (-)
G89038 NA non-coding upstream 320389 8081373 ~ 8081590 (-)
G89067 NA non-coding upstream 481366 8242350 ~ 8244544 (-)
G88789 NA other downstream 504304 7241711 ~ 7242570 (-)
LOC103026131 LOC108431006 other downstream 531635 7103571 ~ 7215239 (-)
G88779 NA other downstream 628748 7117661 ~ 7118126 (-)
vstm2a vstm2a other downstream 1014210 6676275 ~ 6732664 (-)
G88465 NA other downstream 3151549 4595058 ~ 4595325 (-)
LOC103029706 LOC108429024,LOC108268385,LOC107749226,LOC107685514 other upstream 2023639 9784623 ~ 9854099 (-)
G89690 zyx,LOC108428910 other upstream 2133841 9894825 ~ 9901700 (-)
G89708 gapdh,LOC107550818 other upstream 2200298 9961282 ~ 9964606 (-)
LOC103025178 LOC108429038 other upstream 2250833 10011817 ~ 10042853 (-)
G89751 NA other upstream 2462536 10223520 ~ 10224663 (-)

Expression


Co-expression Network