G87271


Basic Information

Item Value
gene id G87271
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 40909646 ~ 40966122 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU117553
aaaactgcactgactttagacttgataataaaacacagtggatcaacaccagcagatgacagacatgtctctccaaaccatcactgattggtggaaacttcacactagacctcgagcagtttggactgtgtgtctccactcttcctccagactctgatcccttcatttactttaaatgaaatgtaaaatttactgatgatcagtgatggtttggata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117553 True 217 lncRNA 0.40 2 40909646 40966122

Neighbor

gene id symbol gene type direction distance location
gnpnat1 gnpnat1,LOC107693128 coding downstream 51182 40844960 ~ 40858464 (-)
LOC103044545 NA coding downstream 247909 40651386 ~ 40661737 (-)
LOC111193263 NA coding downstream 258629 40631203 ~ 40651017 (-)
LOC103044257 LOC103044257,LOC108443405,LOC108269439,LOC107680760 coding downstream 282709 40623224 ~ 40626937 (-)
LOC103044720 fabp7a,fabp7,LOC108443406,LOC108269522,LOC107693085,LOC107723744 coding downstream 313745 40586730 ~ 40595901 (-)
gch1 gch1,LOC107693131,LOC107723641,LOC107564951,LOC107583460,LOC107751761,LOC107680005 coding upstream 28246 40994368 ~ 41023646 (-)
wdhd1 wdhd1,LOC107583614 coding upstream 60748 41026870 ~ 41083608 (-)
gpr137c gpr137c coding upstream 141598 41107720 ~ 41151272 (-)
LOC103035710 NA coding upstream 267723 41233845 ~ 41252428 (-)
rtraf cunh14orf166,zgc:56576,LOC107693089,LOC107583671,LOC107751811,LOC107680004,LOC107725214 coding upstream 382733 41348855 ~ 41359462 (-)
G87067 NA non-coding downstream 66236 40842730 ~ 40843410 (-)
G87034 NA non-coding downstream 183339 40725512 ~ 40726307 (-)
G87013 NA non-coding downstream 239325 40670058 ~ 40670321 (-)
G87011 NA non-coding downstream 261618 40647114 ~ 40648028 (-)
G87010 NA non-coding downstream 281734 40627367 ~ 40627912 (-)
G87269 NA non-coding upstream 24646 40990768 ~ 40991617 (-)
G87301 NA non-coding upstream 154917 41121039 ~ 41121767 (-)
G87305 NA non-coding upstream 171745 41137867 ~ 41139853 (-)
G87304 NA non-coding upstream 173444 41139566 ~ 41203829 (-)
G87307 NA non-coding upstream 181364 41147486 ~ 41147967 (-)
LOC103044865 NA other downstream 139145 40762672 ~ 40770501 (-)
LOC111193261 NA other downstream 373312 40533368 ~ 40536334 (-)
dicer1 dicer1,LOC107552827,LOC107671118,LOC107668604 other downstream 1051077 39808130 ~ 39858569 (-)
G86432 NA other downstream 2840594 37982874 ~ 38069052 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other downstream 3808065 36588904 ~ 37101581 (-)
LOC103040189 NA other upstream 806945 41773067 ~ 41804888 (-)

Expression


Co-expression Network