CI01000009_03760934_03761223


Basic Information

Item Value
gene id CI01000009_03760934_03761223
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3760934 ~ 3761839 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_03760934_03761223.mRNA
TGGGTGTGCGTAATTGCAGAATGTCAGTGGGAACGGCTGGAGATGTGCTCTGGGTTTTCAGCGAGGCAGCTGCCCAGACTCGCTACATTCAGAAACAGCTGGTGCCGTCCATCCAGCCCAGGCAAGAGCAGGTGGGCCTGTCACGACTGACCGCCCCATCCCTGACCCAGCCTCCACCATACGGCCCACAGCAGCCAGAGAGGAGGCCGTGCCAGAACTGTGTCGCTCACAAAGACCGAAATAAAATGGAAGATTTGGTACCCAAAGGAATCTACCCAATGTGGAGGTAGAGCAGATGTTTCTTGTTGCTTTTGATGAGCAGGAAGGCGTCTAAACCTTTGACATTGTGTGGAGTTTCCGATTGGCAAAAATGATGTAAGGTGTAAAGATTATGCTGGATTCATAAAACATTCTTAAGAATAAAAATCTTCTTAAAGGGATAGTTCACCCCAAAATAAAAATTCCATCATCATTTACTCACCCTGAACTTGTTACAAACCTGTATGAATTTCTTTCTTCTGCTGAACACAATAGAAGATATTTTGACGAATGTTGGTAACCAAACAGTTGATGGTTCCCCATTGACTTCCATAGTCCCCCCCTTCATACTATGGAAATCATTGGGGCAACATCAACTGTATGGTTACCCATATTCTTCAAAATATCTTCTTTTGTGTTCAGCAGAAGAAATAAATTCATAGAGCTTTGGCACAACGGAAACACTTTATTTTAAGGATCAGAAATTAGACAGTAATAATGACTAATAACTGCATTTGTAAGTGACTAGTTATGTACTTGTATGCCATTACAAGCTATTTATAAAGCCTTTATTGGCTGTTGTCTTATTTTTGTCTTATAGCCCCTTTATACTTGTTTCTGTCCTAACAATGTACTAATTAGCTACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_03760934_03761223.mRNA True 906 mRNA 0.42 1 3760934 3761839

Neighbor

gene id symbol gene type direction distance location
CI01000009_03724620_03726787 NA coding upstream 33545 3723410 ~ 3727389 (+)
CI01000009_03689901_03697052 GABPA coding upstream 63464 3689330 ~ 3697470 (+)
CI01000009_03680266_03685634 NA coding upstream 75279 3680266 ~ 3685655 (+)
CI01000009_03650884_03661357 TFDP1A, TFDP1 coding upstream 99577 3650884 ~ 3661357 (+)
CI01000009_03466999_03473248 SHOX, MOG-12 coding upstream 287520 3466853 ~ 3473414 (+)
CI01000009_03965885_03980591 NA coding downstream 203817 3965656 ~ 3981149 (+)
CI01000009_04168077_04171609 NA coding downstream 406238 4168077 ~ 4171609 (+)
CI01000009_04188754_04191658 RCAN1, RCAN1A coding downstream 426302 4188141 ~ 4192970 (+)
CI01000009_04193380_04194878 NA coding downstream 431541 4193380 ~ 4194902 (+)
CI01000009_04199761_04203673 MAB21L3 coding downstream 437540 4199379 ~ 4203895 (+)
G51755 NA non-coding upstream 10989 3749624 ~ 3749945 (+)
G51752 NA non-coding upstream 17372 3743300 ~ 3743562 (+)
G51751 NA non-coding upstream 17673 3742964 ~ 3743261 (+)
G51694 NA non-coding upstream 61530 3686478 ~ 3699404 (+)
G51699 NA non-coding upstream 74556 3686017 ~ 3686378 (+)
G51764 NA non-coding downstream 6556 3768395 ~ 3768677 (+)
G51765 NA non-coding downstream 10912 3772751 ~ 3773011 (+)
G51766 NA non-coding downstream 11814 3773653 ~ 3773891 (+)
G51768 NA non-coding downstream 16767 3778606 ~ 3778879 (+)
G51769 NA non-coding downstream 25998 3787837 ~ 3788070 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 551950 3202207 ~ 3208984 (+)
G51529 NA other upstream 698347 3062033 ~ 3062587 (+)
G51274 NA other upstream 1410448 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1859508 1897343 ~ 1919516 (+)
G51122 NA other upstream 2078968 1680146 ~ 1681966 (+)
G53388 NA other downstream 1760403 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2098463 5931718 ~ 5943899 (+)
G53651 NA other downstream 2483725 6245564 ~ 6248392 (+)
G56100 NA other downstream 5367461 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 6091520 9853929 ~ 9856587 (+)

Expression


Co-expression Network