G51755


Basic Information

Item Value
gene id G51755
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3749624 ~ 3749945 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58963
ATTTGTCAGTTGCGTCTTGTTCTGTGTTCACAACAATTCAGTCTTTTCAATGTAAAAGTCTTTGCTACTGACTGACACACTCATAAAGACAGTCTTTGCCACCATCTAATGGCATGAAAATGTAACTTCTGTTGCTGTTCACAGTCAGGGACTATTTTTTCCGGCGGAAGGAAGGCTTTTAGAAAAGGTTTACTTCATGAAAGTTGCATTGATACATATTTCTGGCTTTAATATTTGTATTGTGTGGTAACCGTTTTATAAAAGCAATAATTACTTGTTATATTTTAAGATATATGTTAATATTGGAAATACATATTTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58963 True 322 lncRNA 0.33 1 3749624 3749945

Neighbor

gene id symbol gene type direction distance location
CI01000009_03724620_03726787 NA coding upstream 22235 3723410 ~ 3727389 (+)
CI01000009_03689901_03697052 GABPA coding upstream 52154 3689330 ~ 3697470 (+)
CI01000009_03680266_03685634 NA coding upstream 63969 3680266 ~ 3685655 (+)
CI01000009_03650884_03661357 TFDP1A, TFDP1 coding upstream 88267 3650884 ~ 3661357 (+)
CI01000009_03466999_03473248 SHOX, MOG-12 coding upstream 276210 3466853 ~ 3473414 (+)
CI01000009_03760934_03761223 NA coding downstream 10989 3760934 ~ 3761839 (+)
CI01000009_03965885_03980591 NA coding downstream 215711 3965656 ~ 3981149 (+)
CI01000009_04168077_04171609 NA coding downstream 418132 4168077 ~ 4171609 (+)
CI01000009_04188754_04191658 RCAN1, RCAN1A coding downstream 438196 4188141 ~ 4192970 (+)
CI01000009_04193380_04194878 NA coding downstream 443435 4193380 ~ 4194902 (+)
G51752 NA non-coding upstream 6062 3743300 ~ 3743562 (+)
G51751 NA non-coding upstream 6363 3742964 ~ 3743261 (+)
G51694 NA non-coding upstream 50220 3686478 ~ 3699404 (+)
G51699 NA non-coding upstream 63246 3686017 ~ 3686378 (+)
G51678 NA non-coding upstream 73552 3668710 ~ 3676072 (+)
G51764 NA non-coding downstream 18450 3768395 ~ 3768677 (+)
G51765 NA non-coding downstream 22806 3772751 ~ 3773011 (+)
G51766 NA non-coding downstream 23708 3773653 ~ 3773891 (+)
G51768 NA non-coding downstream 28661 3778606 ~ 3778879 (+)
G51769 NA non-coding downstream 37892 3787837 ~ 3788070 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 540640 3202207 ~ 3208984 (+)
G51529 NA other upstream 687037 3062033 ~ 3062587 (+)
G51274 NA other upstream 1399138 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1848198 1897343 ~ 1919516 (+)
G51122 NA other upstream 2067658 1680146 ~ 1681966 (+)
G53388 NA other downstream 1772297 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2110357 5931718 ~ 5943899 (+)
G53651 NA other downstream 2495619 6245564 ~ 6248392 (+)
G56100 NA other downstream 5379355 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 6103414 9853929 ~ 9856587 (+)

Expression


Co-expression Network