Gene
RNA
| Item | Value |
|---|---|
| gene id | G51678 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 3668710 ~ 3676072 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU58876 | True | 5758 | lncRNA | 0.45 | 3 | 3668710 | 3676072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_03650884_03661357 | TFDP1A, TFDP1 | coding | upstream | 7353 | 3650884 ~ 3661357 (+) |
| CI01000009_03466999_03473248 | SHOX, MOG-12 | coding | upstream | 195296 | 3466853 ~ 3473414 (+) |
| CI01000009_03335503_03355421 | NA | coding | upstream | 313284 | 3335503 ~ 3355426 (+) |
| CI01000009_03330968_03333405 | NA | coding | upstream | 335257 | 3330585 ~ 3333453 (+) |
| CI01000009_03313112_03329470 | MED14 | coding | upstream | 339200 | 3313112 ~ 3329510 (+) |
| CI01000009_03680266_03685634 | NA | coding | downstream | 4194 | 3680266 ~ 3685655 (+) |
| CI01000009_03689901_03697052 | GABPA | coding | downstream | 13258 | 3689330 ~ 3697470 (+) |
| CI01000009_03724620_03726787 | NA | coding | downstream | 47338 | 3723410 ~ 3727389 (+) |
| CI01000009_03760934_03761223 | NA | coding | downstream | 84862 | 3760934 ~ 3761839 (+) |
| CI01000009_03965885_03980591 | NA | coding | downstream | 289584 | 3965656 ~ 3981149 (+) |
| G51685 | NA | non-coding | upstream | 23098 | 3645364 ~ 3645612 (+) |
| G51700 | NA | non-coding | upstream | 23808 | 3644203 ~ 3644902 (+) |
| G51688 | NA | non-coding | upstream | 25101 | 3643301 ~ 3643609 (+) |
| G51676 | NA | non-coding | upstream | 25600 | 3641220 ~ 3643110 (+) |
| G51695 | NA | non-coding | upstream | 56243 | 3612194 ~ 3612467 (+) |
| G51699 | NA | non-coding | downstream | 9945 | 3686017 ~ 3686378 (+) |
| G51694 | NA | non-coding | downstream | 10406 | 3686478 ~ 3699404 (+) |
| G51751 | NA | non-coding | downstream | 66892 | 3742964 ~ 3743261 (+) |
| G51752 | NA | non-coding | downstream | 67228 | 3743300 ~ 3743562 (+) |
| G51755 | NA | non-coding | downstream | 73552 | 3749624 ~ 3749945 (+) |
| CI01000009_03202999_03207060 | MPC2, MPC2.S | other | upstream | 459726 | 3202207 ~ 3208984 (+) |
| G51529 | NA | other | upstream | 606123 | 3062033 ~ 3062587 (+) |
| G51274 | NA | other | upstream | 1318224 | 2255099 ~ 2350486 (+) |
| CI01000009_01897343_01919208 | PIKFYVE | other | upstream | 1767284 | 1897343 ~ 1919516 (+) |
| G51122 | NA | other | upstream | 1986744 | 1680146 ~ 1681966 (+) |
| G53388 | NA | other | downstream | 1846170 | 5522242 ~ 5540638 (+) |
| CI01000009_05931829_05943829 | KCNH3 | other | downstream | 2184230 | 5931718 ~ 5943899 (+) |
| G53651 | NA | other | downstream | 2569492 | 6245564 ~ 6248392 (+) |
| G56100 | NA | other | downstream | 5453228 | 9129300 ~ 9130286 (+) |
| CI01000009_09853929_09854476 | SAP18 | other | downstream | 6177287 | 9853929 ~ 9856587 (+) |
