LOC103047174 (fam57b,fam57bb,LOC108274141,LOC106583943,LOC107578766,LOC106579402)


Basic Information

Item Value
gene id LOC103047174
gene name fam57b,fam57bb,LOC108274141,LOC106583943,LOC107578766,LOC106579402
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 17803734 ~ 17820280 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248685.3
GAGAGACTGTGATACAACGCGGATCTCTTCCTTTGAACTGTGGAGCGCTGAGCGGCGGTGGCGGAGGTAACGGGGTGATAAAGAGTGAGATTTCAGGCTCCTGAATCACCCCGGGAGAGGGTGAGAGGGAAGTGTGACATATTTATCGAGGAAAACATTTTTCCCTCTGCGAGCGGAGCGCACACacagcgggagagagagaggagcgctGAAGCATGTCGCTGAGCCGGGAGGAGAGCGGGAGCCGGACTGCGCTGCTCGCCGGGAATCGGCTCTCCTCAGGCCGCTGACCGGACTCGCGGAGCCGCGCTGTGAATAGAAGAAGGGAAAGAGGGAAGGACAGCAGACCTTCTTGAACAGTTTGAGCGTTTCCTGACCGCAGCATCACCCTATCTCAGCCACCTGGGACCATGCTGTTTATCTTGGCCGCAGGCTCCGTGTTCTTCCCGGGGCTTTTCCTCTTGTCCAAGCAGTGTCTGAAACAGCTGCCTGGTCTGGGATGGAGCGAGGGGGATGCTGTCATGGTGTCtgccagGTTGGTGTcgtccatccaggctgtcatggCTTCTTCAGCTGGTTGTATCATATCAACCTCCTGTGAAGACATCATTAAGGACCAgCACTGGCTAACCACTGCCTACATCCTGTTCGCGGTGCCCTACTTCGTGTACGACATCTACGCCATGTTCCTGTGCTACTGGCACAAGCTTCAAGTCAAAGGTCACGAGGTGGACAGCGGTCCCAAGCTGAAATCCGTGGCTCTGGCCAGCTACCTCCGCCGAGAGTTCCTCATGGTCTTGCACCACGTCGTCATGGTCACTGTGTGCTTCCCCGTCTCTGTGTTCTGGAGGCAGGGGAAAGGCGATTACTTCCAGGGCGTCATGTTCCTAGCTGAACTCAGCACTCCCTCCGTCTGCCTATGCAAAATCCTCATTCAGTACAAGCTGCAGCACACGCTACTTCACAAAGTGAATGGGGCGCTCATGCTGATCACTTTCTTCATCTGTCGAATCCTTCTCTTCCCCTACCTCTACTATGTTTATGGCAGCTACGCCTCCATCCCTTTCTACCTGGTCCCGCTGGCGGTGCCCTGGCAGTGTAACGTGGGGGCGGGTCTCCTCATGGCTCCACAGCTCTATTGGTTCTCCCTCATCTGTAAGGGAGCTCTCCGCCTGTTCACTGGACGCTCCTCGCGCTACCGATCTCCCGAAGGCCCCGCCTCTTCCTGCCTGGACTCGCAGGGGTCACACCCCCAGTCCTCTCAGCCGGccaatggctacagcagtcggATGGCCGCTCTGGACATGCCCATCACCATGAGCCACtaggagaagagagaggagcagCAGGAGAGACTCGGGGTGGAGGACAGAGTGGGAACAGCGTGGGTCACACAAACAAGTGCAACTGAAGAACTGGACCTGAGTGGGGACTGTAATGGAGTAGCGCTATTGtactatagtacagtacagcatGGTACCATGATTAGCTCCGAGACCCATTACTACATGTAGGACTGCTTTAGTAGAAGATGAGAGCTAAAGACTCGTAAAAGACTCCAAAAAAATGGCCAAGCCTGTGTCCGCTGCACGTTTGAGCAAACCGAGCCGATATGCAGCGTTATTAATATGCATTATATAAGCCACTAAAGGGGTTGTCTGTATAGGCATGTCAATGTTGCTGCGAACATGATCAGGAAATCAACTGTTGTAAAACAAATTTTAATGTGAAAATCAATGAGATGGAACCTCCAAATCCAATTGGTTAGACTAAAAAACATCATAAGTAAGTAATTACGACGCTCTTAAACTTTGCAAGCtataaaagaaaacactttacaccgacacattaataaatacattatacaatatatataaggAAAAATTGTAGGTTGCTGGTGACCTCTCTCGTCTcagtaaaactaaaactaatccCTGGCGGTCTGAGAGAAGAGACGGCTCAGGGATTCggaatgtattattttgtagATGATAGAGTGCACTGTTAATAGCAACCGAAGCGTAAAACTAAAGTAACAGGAAGATTTCTCTCCAACGTCCCGCTCTAAGGCCAAATACAGTGTCTTGCAAGAGTATCTGTAACCCTTGaactttttgtcacattttgtcATGTTACAtccaaaaactttaaatatatttaattgagattttaaggTAGACCAACTGCTTTTGAAAGTAACTTAATTAGTTACGGTAATAGAGTCATAcagctgtgtgtaatgtagtctcagtataaatacagctgttctgtgaaggcctcagggGTTTGTTCATGAACAAACAGCATTATGAAGACCAATGAaatcaccagacaggtcagagataaagtcatggagaagtttaaagctaaATCTAAAGGGTTAGGTTATGAAAACATATTCCAAGCTTTGAGCGTCCCTCTGAGCACTGTTCagtccatcatccaaaaatagaaaaaagtacATCTACCAAAACATGGCCAgggtccacccaaactgacagaataagcaaggagagcactggtcagagagaAGCAGCCAAAAGTGGcctatggtcactctggaggagctgtagAAATCCACAGCTTAGGTGGGAAAACTTTAAGTAGtgctccacaaatctggcctttatggaagagtggaaaaagatatagaaaacctttgttgaaagaaagacattgtCACACGCCATGAATTGATAAGGAAGAATGGAGTAAAAATATCAGTGTTTTGAAGAGCAAAGCTGGTAAAGATAAACCTCAAATGACTtactctactaagtattgatatggggttttggtatatttattttatttgatatacATTTTGAAAACTATGTATCATTTTCTTCCACTTTACAATAATGCGTTACTTTGTGTTGCTCtaacacttaaaatctcaataaaatttttatatagtgttatagggtgacaaaatagaaaaaaaaagttcaaaggggtatgaatacttttgcaagccgaCCTCAATGCAGAACGTTGGAGTAGATCTTTACCAGCACTATCTACTGTATGTAtctatacataaatatataaatatatatatatatatatgtaatacttGTATAAACTAAAATGTAAACCCCAGAGACAACCCTGAATTTCTAGGTAAAAAGAGAAGATCAGATATATTAAGCTGCCTTATCCCTTTTggaattatgaattatgtattttagtttatttttgctttttgcctAGAGAAGAatatttccataaaaaaaactttcaaaaaaaacagactgtacATAATCGACAAAATCATTTTCtaatttattgttgtttttgttgacGACACTTTCGTGTGTTACAAATCCCAACTGTAActtattgttttgttattatttgtttatttgcgtTAGTTTCTAtctattattatgtttattatgttttgtgGCATAAATGCTCTTGACGAGCGCTGTTATCATACTGGTTATGAGACGATAATTATGATTTTATGTTGTTACAAAGTCAGTAATCCCACGTATGATCCCCAAAccaatatcaatattaataatataaccGTCCTAACCTGCCTGCAGATACTCTTATTTTCAGTGTTACAGTTATACGTCGGGAATGGTCGTGGAATAAACTGCATACAGTACCAAAACTACCATAATCGATTTTCAATCTAGTTCCTATTTGTGTGCAAATAGCATGCTGTTACGCACAGTAAAACCACATCAGATTATAAAACCATTATTAAACTATTACAGCAGATCAGCACATTCAGATACTGGAAAAATATtggaataatgaataatgtacactatatgttcaaatgtttgagGGAACCTcttctaattaatgcatttagtCACTAAAGGTTTTTAAGGCTCCATCTACATGTATCTggacattttaatatatatatatatatatatatataaacaatcgTGACAAAATTAAGCTTCTCAAAAATCCTCTCTTCGGCAATGTTCACATcaccaggctaaagtgactcaaatctgtttttttgctcaatctgggtcaaatcaaattttttcatggctgtgtgaacatgccaaatccatttttttttttcaaatcagatttaagtcacttttatatgtgaGCCCAAATTGGATACATATACGATTCATGTACATGCGACAttaatgtgaacggtcaaatctgaattcatgcgtctttttttacgcttttacacattagcattagcgctatacgcttctctctcatacccacactCTATCTCTTGGTGCAAC
>XM_007248686.3
GAGAGACTGTGATACAACGCGGATCTCTTCCTTTGAACTGTGGAGCGCTGAGCGGCGGTGGCGGAGGTAACGGGGTGATAAAGAGTGAGATTTCAGGCTCCTGAATCACCCCGGGAGAGGGTGAGAGGGAAGTGTGACATATTTATCGAGGAAAACATTTTTCCCTCTGCGAGCGGAGCGCACACacagcgggagagagagaggagcgctGAAGCATGTCGCTGAGCCGGGAGGAGAGCGGGAGCCGGACTGCGCTGCTCGCCGGGAATCGGCTCTCCTCAGGCCGCTGACCGGACTCGCGGAGCCGCGCTGTGAATAAGGGAAAGAGGGAAGGACAGCAGACCTTCTTGAACAGTTTGAGCGTTTCCTGACCGCAGCATCACCCTATCTCAGCCACCTGGGACCATGCTGTTTATCTTGGCCGCAGGCTCCGTGTTCTTCCCGGGGCTTTTCCTCTTGTCCAAGCAGTGTCTGAAACAGCTGCCTGGTCTGGGATGGAGCGAGGGGGATGCTGTCATGGTGTCtgccagGTTGGTGTcgtccatccaggctgtcatggCTTCTTCAGCTGGTTGTATCATATCAACCTCCTGTGAAGACATCATTAAGGACCAgCACTGGCTAACCACTGCCTACATCCTGTTCGCGGTGCCCTACTTCGTGTACGACATCTACGCCATGTTCCTGTGCTACTGGCACAAGCTTCAAGTCAAAGGTCACGAGGTGGACAGCGGTCCCAAGCTGAAATCCGTGGCTCTGGCCAGCTACCTCCGCCGAGAGTTCCTCATGGTCTTGCACCACGTCGTCATGGTCACTGTGTGCTTCCCCGTCTCTGTGTTCTGGAGGCAGGGGAAAGGCGATTACTTCCAGGGCGTCATGTTCCTAGCTGAACTCAGCACTCCCTCCGTCTGCCTATGCAAAATCCTCATTCAGTACAAGCTGCAGCACACGCTACTTCACAAAGTGAATGGGGCGCTCATGCTGATCACTTTCTTCATCTGTCGAATCCTTCTCTTCCCCTACCTCTACTATGTTTATGGCAGCTACGCCTCCATCCCTTTCTACCTGGTCCCGCTGGCGGTGCCCTGGCAGTGTAACGTGGGGGCGGGTCTCCTCATGGCTCCACAGCTCTATTGGTTCTCCCTCATCTGTAAGGGAGCTCTCCGCCTGTTCACTGGACGCTCCTCGCGCTACCGATCTCCCGAAGGCCCCGCCTCTTCCTGCCTGGACTCGCAGGGGTCACACCCCCAGTCCTCTCAGCCGGccaatggctacagcagtcggATGGCCGCTCTGGACATGCCCATCACCATGAGCCACtaggagaagagagaggagcagCAGGAGAGACTCGGGGTGGAGGACAGAGTGGGAACAGCGTGGGTCACACAAACAAGTGCAACTGAAGAACTGGACCTGAGTGGGGACTGTAATGGAGTAGCGCTATTGtactatagtacagtacagcatGGTACCATGATTAGCTCCGAGACCCATTACTACATGTAGGACTGCTTTAGTAGAAGATGAGAGCTAAAGACTCGTAAAAGACTCCAAAAAAATGGCCAAGCCTGTGTCCGCTGCACGTTTGAGCAAACCGAGCCGATATGCAGCGTTATTAATATGCATTATATAAGCCACTAAAGGGGTTGTCTGTATAGGCATGTCAATGTTGCTGCGAACATGATCAGGAAATCAACTGTTGTAAAACAAATTTTAATGTGAAAATCAATGAGATGGAACCTCCAAATCCAATTGGTTAGACTAAAAAACATCATAAGTAAGTAATTACGACGCTCTTAAACTTTGCAAGCtataaaagaaaacactttacaccgacacattaataaatacattatacaatatatataaggAAAAATTGTAGGTTGCTGGTGACCTCTCTCGTCTcagtaaaactaaaactaatccCTGGCGGTCTGAGAGAAGAGACGGCTCAGGGATTCggaatgtattattttgtagATGATAGAGTGCACTGTTAATAGCAACCGAAGCGTAAAACTAAAGTAACAGGAAGATTTCTCTCCAACGTCCCGCTCTAAGGCCAAATACAGTGTCTTGCAAGAGTATCTGTAACCCTTGaactttttgtcacattttgtcATGTTACAtccaaaaactttaaatatatttaattgagattttaaggTAGACCAACTGCTTTTGAAAGTAACTTAATTAGTTACGGTAATAGAGTCATAcagctgtgtgtaatgtagtctcagtataaatacagctgttctgtgaaggcctcagggGTTTGTTCATGAACAAACAGCATTATGAAGACCAATGAaatcaccagacaggtcagagataaagtcatggagaagtttaaagctaaATCTAAAGGGTTAGGTTATGAAAACATATTCCAAGCTTTGAGCGTCCCTCTGAGCACTGTTCagtccatcatccaaaaatagaaaaaagtacATCTACCAAAACATGGCCAgggtccacccaaactgacagaataagcaaggagagcactggtcagagagaAGCAGCCAAAAGTGGcctatggtcactctggaggagctgtagAAATCCACAGCTTAGGTGGGAAAACTTTAAGTAGtgctccacaaatctggcctttatggaagagtggaaaaagatatagaaaacctttgttgaaagaaagacattgtCACACGCCATGAATTGATAAGGAAGAATGGAGTAAAAATATCAGTGTTTTGAAGAGCAAAGCTGGTAAAGATAAACCTCAAATGACTtactctactaagtattgatatggggttttggtatatttattttatttgatatacATTTTGAAAACTATGTATCATTTTCTTCCACTTTACAATAATGCGTTACTTTGTGTTGCTCtaacacttaaaatctcaataaaatttttatatagtgttatagggtgacaaaatagaaaaaaaaagttcaaaggggtatgaatacttttgcaagccgaCCTCAATGCAGAACGTTGGAGTAGATCTTTACCAGCACTATCTACTGTATGTAtctatacataaatatataaatatatatatatatatatgtaatacttGTATAAACTAAAATGTAAACCCCAGAGACAACCCTGAATTTCTAGGTAAAAAGAGAAGATCAGATATATTAAGCTGCCTTATCCCTTTTggaattatgaattatgtattttagtttatttttgctttttgcctAGAGAAGAatatttccataaaaaaaactttcaaaaaaaacagactgtacATAATCGACAAAATCATTTTCtaatttattgttgtttttgttgacGACACTTTCGTGTGTTACAAATCCCAACTGTAActtattgttttgttattatttgtttatttgcgtTAGTTTCTAtctattattatgtttattatgttttgtgGCATAAATGCTCTTGACGAGCGCTGTTATCATACTGGTTATGAGACGATAATTATGATTTTATGTTGTTACAAAGTCAGTAATCCCACGTATGATCCCCAAAccaatatcaatattaataatataaccGTCCTAACCTGCCTGCAGATACTCTTATTTTCAGTGTTACAGTTATACGTCGGGAATGGTCGTGGAATAAACTGCATACAGTACCAAAACTACCATAATCGATTTTCAATCTAGTTCCTATTTGTGTGCAAATAGCATGCTGTTACGCACAGTAAAACCACATCAGATTATAAAACCATTATTAAACTATTACAGCAGATCAGCACATTCAGATACTGGAAAAATATtggaataatgaataatgtacactatatgttcaaatgtttgagGGAACCTcttctaattaatgcatttagtCACTAAAGGTTTTTAAGGCTCCATCTACATGTATCTggacattttaatatatatatatatatatatatataaacaatcgTGACAAAATTAAGCTTCTCAAAAATCCTCTCTTCGGCAATGTTCACATcaccaggctaaagtgactcaaatctgtttttttgctcaatctgggtcaaatcaaattttttcatggctgtgtgaacatgccaaatccatttttttttttcaaatcagatttaagtcacttttatatgtgaGCCCAAATTGGATACATATACGATTCATGTACATGCGACAttaatgtgaacggtcaaatctgaattcatgcgtctttttttacgcttttacacattagcattagcgctatacgcttctctctcatacccacactCTATCTCTTGGTGCAAC

Function

NR:

description
protein FAM57B

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248685.3 True 4241 mRNA 0.42 7 17803734 17820280
XM_007248686.3 False 4236 mRNA 0.42 7 17803734 17820280

Neighbor

gene id symbol gene type direction distance location
wnk4 NA coding downstream 19456 17711000 ~ 17784278 (-)
lsm12 lsm12,LOC107708984,LOC107693683,LOC107562026 coding downstream 286024 17509960 ~ 17517710 (-)
LOC103024821 LOC108425935 coding downstream 298917 17500469 ~ 17504817 (-)
LOC111192380 NA coding downstream 337063 17442641 ~ 17466671 (-)
LOC111192420 NA coding downstream 365242 17431006 ~ 17438492 (-)
maz maz coding upstream 2478 17822758 ~ 17836906 (-)
taok2 taok2b,LOC107693686,LOC108273910,LOC107562015,LOC107708977,LOC107571768 coding upstream 19147 17839427 ~ 17872154 (-)
LOC103022355 NA coding upstream 83924 17904204 ~ 17918797 (-)
prodh2 prodh2,zgc:92040 coding upstream 109027 17929307 ~ 17939085 (-)
LOC103023166 LOC108425993 coding upstream 121570 17941850 ~ 17960291 (-)
G37333 LOC103045739 non-coding downstream 95129 17705734 ~ 17708605 (-)
G37309 NA non-coding downstream 247812 17553572 ~ 17555922 (-)
G37298 tmem101,LOC107720276 non-coding downstream 309319 17488885 ~ 17494415 (-)
G37274 tomm22,LOC107554024,LOC107584213,LOC107692102 non-coding downstream 413313 17385841 ~ 17390421 (-)
G37254 tnrc6b,LOC107690060 non-coding downstream 466412 17335591 ~ 17337322 (-)
G37443 NA non-coding upstream 306254 18126534 ~ 18126807 (-)
G37444 NA non-coding upstream 306974 18127254 ~ 18127560 (-)
G37449 NA non-coding upstream 317669 18137949 ~ 18139122 (-)
G37450 NA non-coding upstream 320512 18140792 ~ 18141076 (-)
G37451 NA non-coding upstream 321727 18142007 ~ 18142377 (-)
vps25 vps25 other downstream 7746 17789951 ~ 17795988 (-)
cntd1 NA other downstream 98711 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 114350 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 326856 17473910 ~ 17476878 (-)
G37290 NA other downstream 337710 17432972 ~ 17466024 (-)
LOC103047479 LOC108441156 other upstream 462210 18282490 ~ 18317957 (-)
G37603 NA other upstream 752411 18572691 ~ 18573176 (-)
G37616 NA other upstream 813298 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 1723945 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1997988 19818268 ~ 19825652 (-)

Expression


Co-expression Network