G51531


Basic Information

Item Value
gene id G51531
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3064200 ~ 3064432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58710
GTTGTATATGCCCATTTTTGAGTGGAAGGAAAAACGTGTTGTTTTCGTGCATATATGTTTAAATGCAAATGAGCCTTGGATACTCTGCCAAAAACTAACAAAATATCTGTTTTGTTTTGATTATCATCTCTATCGTGGCCACATTCACGTGACATTGCAGTTCTTCATCATCATGAAAGTTTTTTATTTGCATGCATTTTAAAGCCATAATCAACTTCTGATATATGGTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58710 True 233 lncRNA 0.34 1 3064200 3064432

Neighbor

gene id symbol gene type direction distance location
CI01000009_02918681_02973307 KDM6A coding upstream 90248 2918681 ~ 2973952 (+)
CI01000009_02799246_02827589 NA coding upstream 236560 2799031 ~ 2827640 (+)
CI01000009_02713403_02713914 NA coding upstream 350202 2712958 ~ 2713998 (+)
CI01000009_02674026_02678655 NA coding upstream 385454 2673802 ~ 2678746 (+)
CI01000009_02667840_02668883 NA coding upstream 395036 2667442 ~ 2669164 (+)
CI01000009_03123137_03137452 CCDC80 coding downstream 57684 3122116 ~ 3138311 (+)
CI01000009_03145417_03159851 F5 coding downstream 80985 3145417 ~ 3159914 (+)
CI01000009_03164135_03169470 GPR161 coding downstream 97886 3162318 ~ 3170140 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S coding downstream 137775 3202207 ~ 3208984 (+)
CI01000009_03211734_03220047 NXPE3 coding downstream 147302 3211734 ~ 3222297 (+)
G51527 NA non-coding upstream 9188 3054332 ~ 3055012 (+)
G51525 NA non-coding upstream 12836 3050909 ~ 3051364 (+)
G51523 NA non-coding upstream 14092 3049792 ~ 3050108 (+)
G51522 NA non-coding upstream 17101 3046149 ~ 3047099 (+)
G51514 NA non-coding upstream 62292 3001610 ~ 3001908 (+)
G51537 NA non-coding downstream 11710 3076142 ~ 3076380 (+)
G51539 NA non-coding downstream 17497 3081929 ~ 3082410 (+)
G51553 NA non-coding downstream 43294 3107726 ~ 3108011 (+)
G51552 NA non-coding downstream 44031 3108463 ~ 3108912 (+)
G51558 NA non-coding downstream 53426 3117858 ~ 3118356 (+)
G51529 NA other upstream 1613 3062033 ~ 3062587 (+)
G51274 NA other upstream 713714 2255099 ~ 2350486 (+)
CI01000009_01897343_01919208 PIKFYVE other upstream 1162774 1897343 ~ 1919516 (+)
G51122 NA other upstream 1382234 1680146 ~ 1681966 (+)
CI01000009_01431700_01434463 NA other upstream 1625845 1429873 ~ 1435328 (+)
G53388 NA other downstream 2457810 5522242 ~ 5540638 (+)
CI01000009_05931829_05943829 KCNH3 other downstream 2795870 5931718 ~ 5943899 (+)
G53651 NA other downstream 3181132 6245564 ~ 6248392 (+)
G56100 NA other downstream 6064868 9129300 ~ 9130286 (+)

Expression


Co-expression Network