LOC103029950


Basic Information

Item Value
gene id LOC103029950
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 7877034 ~ 7882211 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015601074.2
CATTATGATTATGTGCTTTTTAATACAGCAAAGAAAGAAATAGGATACCAGCAAACACTGTTATAAACGACCTTCTGAGGAGGACCTGAGAAGGACCACTATAAAAATAGTGCACAATCATTCAAAGTGCACTTATTACTCAAGCTTGTGAAGTGCACTAGTGTGCGGATTGGGACGCCAGTACTCTCCCTCATTCCTCGAGGGGCGTCAACATACTGAGAGCTGCATACTGAAATGCTGTTGTCCTTTCCAATCCTTTTGGAAGCATATAGCTAGTTCTCTTAACCAACTGAACCCTTTTTATATCACTTTAGATCAGatctgaGAAAAATGGAGTCCTTGTCTGTAGCAAACACAAGTTTTGCTCTTGATCTGTTCAAGAAGATCAGAGAAGGCAACAAACAGGGCAACATGTTCTACTCTCCTCTCAGCATCTCCTCGGCACTGGCCATGGTGTCTCTGGGAGCTGCAGGCAACACTGAAGCTCAGATGTCTGAGACTTTGCAGTTCAACAAAGCCAAAGTTGACATTCACATTGGCTTCAACCAGCTCTTAAATGAACTGAACAAAGCAGGAGCTCCATACTCCCTCACCCTGGCCAATCGGCTTTATGGAGAGCAGACCTACCAGTTTGTGGAGAAATTTCTAGCGGATACAAAACAGCACTACCATGCAGAGCTAGAGACTGctgattttaaatcaaattcaGAGGCTGCACGCGTACATATTAATACATGGGTGGAAAAGCAAACACAAGAAAAGATTAAGGACTTGCTGGCTGAAGGAGTTGTTGATGAATTGACCAGACTCGTCTTGGTGAATGCCATCTACTTTAAGTGTAACTGGGAGAAGAGGTTTCTGTCATTTGAAACAAGAGAGGTTCAATTTAAACTAAATAAGAAAGAAACCAAACCAGTGCAGATGATGAATCAGGAGGAACGGTTTCACCTGGCCTTAATCCCTGATATAAACTGCCAGATTCTGGAAATGCCATATGAAGGGAATGATCTCAGCATGCTGTTTATTCTTCCTAATGAGATACAGGATGACACTACTGGGCTTGAGAAGcttGAGCAAAGCCTCACCTATGAGAACTTCATGGAGTGGACACGGCCTGATATGATGGAAACTGTGAACGTGGAGGTGTCTTTGCCCCGGTTTAAACTGGAACAGACTTATGACATGAAGGAGCTGTTGGTCAGCATGGGCATGGTGGACGCCTTTGATCAAGTCAAGTGTGATTTCTCACGCATGTCTCCATGTGATAATCTGGTGCTCTCCAAGGTGGTGCATAAATCCTTCGTGGAGGTGAACGAGGAAGGCACAGAAGCAGCTGCGGCGACTGCAGCCATCATGACTTTAGATTGCCTTTTGATTTGCCAAAGGAGATTTGTGGCAGATCacccctttctctttttcatcaGACACAATGCAACTGGAAGCATTCTCTTCTGTGGACGATTCAGTTCTccttaatatatataaacttgaATCATCtgtttagcatttttaaaaataaatgttactgtCTGTGAAATAAAGAGCTTTTATGCAGCTCTGTTAAGGGATCATAAAATCTGCTGAGGGAATTTTGCATTGCTTTATAAAACATTGTGCCATAAATCTGTTATGCAATCTGAAGTTTTAAGAAATGCTTTGCCTAAA

Function

GO: NA

KEGG:

id description
K23425 SERPINB1; leukocyte elastase inhibitor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015601074.2 True 1665 mRNA 0.42 7 7877034 7882211

Neighbor

gene id symbol gene type direction distance location
LOC103033961 LOC108431065 coding downstream 5021 7860024 ~ 7872013 (-)
mrpl17 mrpl17,LOC107657704 coding downstream 37560 7834245 ~ 7839474 (-)
LOC103024588 LOC103024588,LOC108431074 coding downstream 497820 7373857 ~ 7379214 (-)
LOC103024076 NA coding downstream 508472 7338760 ~ 7368562 (-)
ptpn3 ptpn3,LOC108256378,LOC107687805,LOC107706310,LOC107595851,LOC107723490,LOC107657714,LOC107593679 coding downstream 591304 7239009 ~ 7285730 (-)
LOC103027725 NA coding upstream 5776 7887987 ~ 7909267 (-)
anks6 anks6,LOC103376383 coding upstream 135937 8018148 ~ 8036248 (-)
LOC103026338 LOC103026338,LOC108414855 coding upstream 198514 8080725 ~ 8142026 (-)
vps13b vps13b coding upstream 303817 8186028 ~ 8495751 (-)
osr2 osr2,LOC106591507 coding upstream 618242 8500453 ~ 8504477 (-)
G17236 NA non-coding downstream 129084 7686941 ~ 7747950 (-)
G17237 NA non-coding downstream 185345 7607954 ~ 7691689 (-)
G17240 NA non-coding downstream 207919 7656754 ~ 7669115 (-)
G17187 NA non-coding downstream 365948 7510637 ~ 7511086 (-)
G17181 NA non-coding downstream 440414 7436376 ~ 7436620 (-)
G17305 NA non-coding upstream 109556 7991767 ~ 7992427 (-)
G17313 NA non-coding upstream 173822 8056033 ~ 8056289 (-)
G17326 hus1 non-coding upstream 266756 8148967 ~ 8159385 (-)
G17514 NA non-coding upstream 786779 8668990 ~ 8673177 (-)
G17532 NA non-coding upstream 864169 8746380 ~ 8788287 (-)
sec61b sec61b,LOC102796100 other downstream 1332759 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 1514029 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 1766751 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 1776690 6083120 ~ 6100344 (-)
G16709 NA other downstream 2176547 5697045 ~ 5700487 (-)
LOC103026934 ahrr,LOC108431062 other upstream 42718 7924929 ~ 8007620 (-)
LOC111188216 NA other upstream 978923 8861134 ~ 8886317 (-)
G17638 NA other upstream 1680216 9562427 ~ 9562725 (-)
mak mak other upstream 2112934 9995145 ~ 10009151 (-)
G17792 NA other upstream 2364464 10246675 ~ 10247318 (-)

Expression


Co-expression Network