G17181


Basic Information

Item Value
gene id G17181
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 7436376 ~ 7436620 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU23173
gaccgtccAACAGTcgtcccagcataagttctgacccccctctgatctgactccatgttttataccccaaatgacgtgaaacctgttgatgaggcgttgttaaaatcatctcatgttagcatgcacgTGTTAGTACTgaagtttcacgtgtctgactggaccactagtgtttgaccTTGACTGCGTTCCTCCAGAACGGAACCTcatggcactatctgtgtgtgtgcgtcacccccctctttgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23173 True 245 lncRNA 0.51 1 7436376 7436620

Neighbor

gene id symbol gene type direction distance location
LOC103024588 LOC103024588,LOC108431074 coding downstream 57162 7373857 ~ 7379214 (-)
LOC103024076 NA coding downstream 67814 7338760 ~ 7368562 (-)
ptpn3 ptpn3,LOC108256378,LOC107687805,LOC107706310,LOC107595851,LOC107723490,LOC107657714,LOC107593679 coding downstream 150646 7239009 ~ 7285730 (-)
LOC103025538 epb41l4b,LOC108443285,LOC108256379,LOC107706320 coding downstream 199974 7179416 ~ 7236402 (-)
virma kiaa1429,LOC107706278,LOC107723452,LOC107595823,LOC107593674 coding downstream 297250 7112050 ~ 7139126 (-)
mrpl17 mrpl17,LOC107657704 coding upstream 397625 7834245 ~ 7839474 (-)
LOC103033961 LOC108431065 coding upstream 423404 7860024 ~ 7872013 (-)
LOC103029950 NA coding upstream 440414 7877034 ~ 7882211 (-)
LOC103027725 NA coding upstream 451367 7887987 ~ 7909267 (-)
anks6 anks6,LOC103376383 coding upstream 581528 8018148 ~ 8036248 (-)
G17134 NA non-coding downstream 63888 7370368 ~ 7372488 (-)
G17144 LOC108431076,LOC108256683 non-coding downstream 114068 7321499 ~ 7322308 (-)
G17123 NA non-coding downstream 225632 7206012 ~ 7210744 (-)
G17122 NA non-coding downstream 248521 7186865 ~ 7187855 (-)
G17121 NA non-coding downstream 249575 7186193 ~ 7186801 (-)
G17187 NA non-coding upstream 74017 7510637 ~ 7511086 (-)
G17237 NA non-coding upstream 171334 7607954 ~ 7691689 (-)
G17240 NA non-coding upstream 220134 7656754 ~ 7669115 (-)
G17236 NA non-coding upstream 250321 7686941 ~ 7747950 (-)
G17305 NA non-coding upstream 555147 7991767 ~ 7992427 (-)
sec61b sec61b,LOC102796100 other downstream 892101 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 1073371 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 1326093 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 1336032 6083120 ~ 6100344 (-)
G16709 NA other downstream 1735889 5697045 ~ 5700487 (-)
LOC103026934 ahrr,LOC108431062 other upstream 488309 7924929 ~ 8007620 (-)
LOC111188216 NA other upstream 1424514 8861134 ~ 8886317 (-)
G17638 NA other upstream 2125807 9562427 ~ 9562725 (-)
mak mak other upstream 2558525 9995145 ~ 10009151 (-)
G17792 NA other upstream 2810055 10246675 ~ 10247318 (-)

Expression


Co-expression Network