mgat3 (mgat3,LOC103038268,LOC107705910)


Basic Information

Item Value
gene id mgat3
gene name mgat3,LOC103038268,LOC107705910
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 20384487 ~ 20463595 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231209.2
TCTTCGCGTGATCTTTGAAGGGAGAAACGCAAAAATAACGGAAAGTGAGTGAGAGCCGCACGCGCAGATTAGGGCGTCGTGTGTTTAGTAGCCGCACGGACACACGGAGCTCGTGAGCGAGAGAGGGGTAAAGGAGAGCGGGAGAACgtgaggaggagaagaggaggagatcGAGCCGTGAAAGCGTCAGGAATCGCTGCAgcgggaaggagagagagagggatagatagagagagagagacccaggGGGGTGCCCCTTTTCCTCTCCGCATCGGCAACGCGGCTCCGGGATGGGCCGCGGCCGGGCTTGGGGACAGCGGGACCGGCTGTGTCGAGGCGGGGCTCCGCCGTGAAGACTCTGCGGTGCTTTTTAAAACCGCACACCGAACAAAGGCTCCGCGCTGCGGGAGAAAATCAGACCTGGGATGCTGTTTGACCGCCGGATCACCGCCTCATCCGCAACGCCGAGCATCTAGAGCCCCGCTGCAGGCAGGCGATGGGATGAAAATGCGACGTCACAGAGTATTCTTGCTTTGCACTGTGGGGCTATGTGTCATCTCCTTCCTCCATTACTACAAGGCCCTGCACTACGTCTCTCTGCTACGAGAGCTCTCAGCTCCATACCCCAACATCAAGTCCTTCATCATGGTGACTGGATTCTTCTGGAGGGAGCGGGCCACCCCCCTGACCAGTGCCTCCCCAGAGGAAGGGCCCCCACCGGCCCTGAGACCGTCTGACACAAGACCCCGTGCTGAGGAGGGCATTGGAGGAATAGACAGAGGCCTGGAACTGGAACGGGCAGGGGAACCCAAAGCACCACATCCGTGGGCAAAACCTGAAGAACGACAACACCAAGAGGTGGATCTCACTGAGCAGCAGAATGAAAATGCTAAGCTGGTGGTGTGGCACCCCAGTAGCCCAGCTCATCAGAGACCAGACTTCCAGCGACAGAGCGTTCCCAGCTCGACAGTGAAGCTTCAACCCAAGCAAGCTTCCACTCCAGACCCCTCCAGGTTTATAGGTGACTTACACAAGCGCACCTTTACCCTCCAGGAGGATCACACACCCTACTTTGTCCGCACCAAAGCTGGAGCCTGGTGCTTTCGGCAAGGAACGGAGGTAGCACCTCCTCGGGATGATGCTGGGACGGGGAAAGGTAGACCAACGATGGCAGGTGCACTCCAGAGAAAGATCTTGCAAGATCCCGAGGAGTTAAACGCTGGAGGAAAAGCAGCCGAGGAGTCGAGTGCCCCCAAATTAAAGCCCAAACGGGGCAAGAGGTTAGTGAAGTGTGTGTGCCGGCCTGGATGGCACGGTCCATATTGTGGCGTGCCTACCATGGTGTACCACTCCAACCTGCCTACTAAGGAAAGGCTGATCCCTCGTGAGAAACCGCGTAGAGTCATCAATGCGATCAACGTCAATCACGAGTTTGACCTGCTGCACGTTCGCTTCCACGAGCTGGCCAATGCCGTGGACCTGTTCTTGGTGTGCGAGTCTAACTTCACGGCGTATGGCGAGCGGCGGCCGCTGAGCTTTCTGCGCCGCCTGCTCAACGGCACCTACGACTACGTGCGACACAAGATCCTGTACGTATTTCTGAACCACTTCCCAGACGGTGGACGCCAGGACGGCTGGATTGCTGATGACTACTTGCGTACGTTCCTCACACGAGACGGGATGTCCCGTGTGCGAGGACTGCGGCCGGACGACGTCTTCCTCATCAACGATGCTGATGAGATCCCGGCCCAAGAGGGCATCCTTTTCCTCAAGCTGTTTGACGGCTGGACGGAACCTTTCGCCATCCACATGCGGAAGTCTCTGTATGGGTTCTTCTGGAAGCAGCTGGGTTCGCTCGAGGTGGTGTCTGGATGCACGACGGGGATGTTAAGCGAGGTATACGACAACGACGGGATCCGTTTGCGTCGGCGCGATTATTACACCATGCCTAGGTTCCGCAAGTATGAGAATGACACGGGACACATCCTGGTGCAGTGGTCACTTGGAAGCCCCTTCCACTTTGCTGGCTGGCATTGCTCCTGGTGCTTCACGCCTGAGGGCATCCATCTCAAACTCGTATCCGCCCAGAACGGGGACTTCCCACGCTGGGGGGACTACGAGGACAAGCGGGACCTAAACTACATCCGCGAGCTGATCCGAACTGGGGGCTGGTTCGATGGCTCGGTGCAGGAGTACCCGCCTTCAGACCCTAAGGAACACATGTATGCACCCAAATACATGTTGGACAATTTCAAACATTACCAGTACCTGCTGGAGAACCCTTATGCAAAGCAACCTGTGCTGAGTGGGGGGTAGCTGTACTGATCCTTAGCCGTTGTTGATTCGGTTTAAAAGGGGTCAAAATGGGTCCCAATATCGGGGGAGGGAGGGAATAGATCTCTGCCTACATTGTTTTTTCCCTGTTCTCTCTCATTGGACCAGACCCCAAAGGTCACACACCACCATCCAATCATTGGCAGAGGTGGGTGGGGCCAGCCAAGGCTTAAATTATGGACAAATTAAGCCTTGTGGAGTATcctgtggagaaaaaaagatttctttggttgtttgtttctttggtttggtttctgtTGCTGTTACTCAGCGAATATACAGAATCCTACAGGAACTGTATCAACCCGTCCATTTGTGCTGGGTTCACTACTTTGTGTCCCTATTCTTtttgtgagtgtatgagtgtgtgtgtgtgtgtgtgagagagagagataaagagtaattgagagagacagaaagagaaggaaggaGAGCGAGGGTGTTATATAGAGTAATATAAAGTGTGTGGGTATAATTGGACTTCATTGTCCGTAGTGCACTCCTGTTTTTTGCTTGCACATCAaacgatggaaaaaaaggaaacatcAACTCCTACAGATTCAGCTTTTTTTAACCTATTTGGAAAGCTATACCTATTCATGTCTcatcagaaaacaaaaatacttGTGTGCGTGTACGCTATGTCAGAGAGAAAGCTTTTGACGAGGCCGTGTGAGGCAGTGAGCGAGTCAGATGGGGGATTACTGTACAAAAGAGGgaacgagagagaaaaagagactgtTCTAATTTTGGTCTGATTTCGCTGATGCGTTTAGGTCCCCAGCTGCCGCAGGTCTGGAACAGGGGcactggaaaacacaggaagCACTGAACATGCTCGGATGAGGTTGCACTAGAGTTTCGGTGATACGCCTGGCAAATGGTTAGCTGTTGTAACTCTGCTAATGCGGGAAAGTTCCAAATCTATAGAGAAACTAAGAGACTTTGTCtacatatttgaatatttgatgaAGGATCATGGCATAGCTAGGCTGGAGGCAGTGGTCGATAGTGAACGCAGACACTGCAGCTAATCATATTTCACATTAATATCAGAATATCCAACAGCAATATtgcacattaaattaaatttctgGGCATGTTTCTGCACTCTTATTAAATACATGCAGTAGACCTGCATGAGGCTCATCCAAAAGCAGAACAAATCAGCAGGTCAGTTGGTTGGATTTCTGCACCGCTACAGAATGATGGCCAGAAGTAACCAGAGGGAATCTTGACGCTAGGAAAGCTGCCTTGATTTAAAGCAGTTGAGGAACATAGCAGACATAGTGAGCTCTGGTCAACTCCTGCACAGGCTTTAACAAAGGAGTCCAGTTCTTGCAGAACTTCCGGACTTGGCTTTGATTGCCCAAGCGTGCATGCCGTGGTGCACTTGTGGTGCGCAGGGATAGACGCAAAAATATTACACTGGTGAACTCAGTGGAGGTGCATAGCAGTTTCCAGAGAAAGGGGATAGGAAGTGCGGATGGGGTAGAAACGAGCGGAGTATCAGAAGAGAGAACAGTGTGATGTCCCTTCCCAGAGAAGATCTGAATAAATTATGGCGGATGTTAACATCCTGTATGGCAGGAGACAATTTCAGTTCAggtttaacccttaaacttcttTGCCAAAGTTGTATTGATGTAAAATGAAGGAACATAATTTGGCGTAAAGGTTCACACTTATCACACACATCTCTGTTATAAACATGGTTCTTTTTTATGGAACAAAAGGTGGATCTTATATAGCACTGCACAAATAACCATTTAAAGCAGCTTCATTTTGCAAGATATTGTttgaaagagttttttttacaaatatagttTGTTTTCTCTGCTCCGAATCCGTTGAggagtttttaaacttttttacaccaaaaagtaaaaaattcaaGTGCACCAAAATTCATCTTAAGAAATCATATGAGAATGTTTTCTCTCAGCTTATTAGTCAGAGCTCTCTTGGGCAAGCAGTTTGGACAGAATTGGGACTAGATCCTAGATGCAACTCAGACTCAGCATGTGATATTTGgccctgaatttttttttatctggacaGATGTTTCACAAA
>XM_022675528.1
cccCCTCTTCGCGTGATCTTTGAAGGGAGAAACGCAAAAATAACGGAAAGTGAGTGAGAGCCGCACGCGCAGATTAGGGCGTCGTGTGTTTAGTAGCCGCACGGACACACGGAGCTCGTGAGCGAGAGAGGGGTAAAGGAGAGCGGGAGAACgtgaggaggagaagaggaggagatcGAGCCGTGAAAGCGTCAGGAATCGCTGCAgcgggaaggagagagagagggatagatagagagagagagacccaggGGGGTGCCCCTTTTCCTCTCCGCATCGGCAACGCGGCTCCGGGATGGGCCGCGGCCGGGCTTGGGGACAGCGGGACCGGCTGTGTCGAGGCGGGGCTCCGCCGTGAAGACTCTGCGGTGCTTTTTAAAACCGCACACCGAACAAAGGCTCCGCGCTGCGGGAGAAAATCAGACCTGGGATGCTGTTTGACCGCCGGATCACCGCCTCATCCGCAACGCCGAGCATCTAGAGCCCCGCTGCAGGCAGGCGATGGGATGAAAATGCGACGTCACAGAGTATTCTTGCTTTGCACTGTGGGGCTATGTGTCATCTCCTTCCTCCATTACTACAAGGCCCTGCACTACGTCTCTCTGCTACGAGAGCTCTCAGCTCCATACCCCAACATCAAGTCCTTCATCATGGTGACTGGATTCTTCTGGAGGGAGCGGGCCACCCCCCTGACCAGTGCCTCCCCAGAGGAAGGGCCCCCACCGGCCCTGAGACCGTCTGACACAAGACCCCGTGCTGAGGAGGGCATTGGAGGAATAGACAGAGGCCTGGAACTGGAACGGGCAGGGGAACCCAAAGCACCACATCCGTGGGCAAAACCTGAAGAACGACAACACCAAGAGGTGGATCTCACTGAGCAGAATGAAAATGCTAAGCTGGTGGTGTGGCACCCCAGTAGCCCAGCTCATCAGAGACCAGACTTCCAGCGACAGAGCGTTCCCAGCTCGACAGTGAAGCTTCAACCCAAGCAAGCTTCCACTCCAGACCCCTCCAGGTTTATAGGTGACTTACACAAGCGCACCTTTACCCTCCAGGAGGATCACACACCCTACTTTGTCCGCACCAAAGCTGGAGCCTGGTGCTTTCGGCAAGGAACGGAGGTAGCACCTCCTCGGGATGATGCTGGGACGGGGAAAGGTAGACCAACGATGGCAGGTGCACTCCAGAGAAAGATCTTGCAAGATCCCGAGGAGTTAAACGCTGGAGGAAAAGCAGCCGAGGAGTCGAGTGCCCCCAAATTAAAGCCCAAACGGGGCAAGAGGTTAGTGAAGTGTGTGTGCCGGCCTGGATGGCACGGTCCATATTGTGGCGTGCCTACCATGGTGTACCACTCCAACCTGCCTACTAAGGAAAGGCTGATCCCTCGTGAGAAACCGCGTAGAGTCATCAATGCGATCAACGTCAATCACGAGTTTGACCTGCTGCACGTTCGCTTCCACGAGCTGGCCAATGCCGTGGACCTGTTCTTGGTGTGCGAGTCTAACTTCACGGCGTATGGCGAGCGGCGGCCGCTGAGCTTTCTGCGCCGCCTGCTCAACGGCACCTACGACTACGTGCGACACAAGATCCTGTACGTATTTCTGAACCACTTCCCAGACGGTGGACGCCAGGACGGCTGGATTGCTGATGACTACTTGCGTACGTTCCTCACACGAGACGGGATGTCCCGTGTGCGAGGACTGCGGCCGGACGACGTCTTCCTCATCAACGATGCTGATGAGATCCCGGCCCAAGAGGGCATCCTTTTCCTCAAGCTGTTTGACGGCTGGACGGAACCTTTCGCCATCCACATGCGGAAGTCTCTGTATGGGTTCTTCTGGAAGCAGCTGGGTTCGCTCGAGGTGGTGTCTGGATGCACGACGGGGATGTTAAGCGAGGTATACGACAACGACGGGATCCGTTTGCGTCGGCGCGATTATTACACCATGCCTAGGTTCCGCAAGTATGAGAATGACACGGGACACATCCTGGTGCAGTGGTCACTTGGAAGCCCCTTCCACTTTGCTGGCTGGCATTGCTCCTGGTGCTTCACGCCTGAGGGCATCCATCTCAAACTCGTATCCGCCCAGAACGGGGACTTCCCACGCTGGGGGGACTACGAGGACAAGCGGGACCTAAACTACATCCGCGAGCTGATCCGAACTGGGGGCTGGTTCGATGGCTCGGTGCAGGAGTACCCGCCTTCAGACCCTAAGGAACACATGTATGCACCCAAATACATGTTGGACAATTTCAAACATTACCAGTACCTGCTGGAGAACCCTTATGCAAAGCAACCTGTGCTGAGTGGGGGGTAGCTGTACTGATCCTTAGCCGTTGTTGATTCGGTTTAAAAGGGGTCAAAATGGGTCCCAATATCGGGGGAGGGAGGGAATAGATCTCTGCCTACATTGTTTTTTCCCTGTTCTCTCTCATTGGACCAGACCCCAAAGGTCACACACCACCATCCAATCATTGGCAGAGGTGGGTGGGGCCAGCCAAGGCTTAAATTATGGACAAATTAAGCCTTGTGGAGTATcctgtggagaaaaaaagatttctttggttgtttgtttctttggtttggtttctgtTGCTGTTACTCAGCGAATATACAGAATCCTACAGGAACTGTATCAACCCGTCCATTTGTGCTGGGTTCACTACTTTGTGTCCCTATTCTTtttgtgagtgtatgagtgtgtgtgtgtgtgtgtgagagagagagataaagagtaattgagagagacagaaagagaaggaaggaGAGCGAGGGTGTTATATAGAGTAATATAAAGTGTGTGGGTATAATTGGACTTCATTGTCCGTAGTGCACTCCTGTTTTTTGCTTGCACATCAaacgatggaaaaaaaggaaacatcAACTCCTACAGATTCAGCTTTTTTTAACCTATTTGGAAAGCTATACCTATTCATGTCTcatcagaaaacaaaaatacttGTGTGCGTGTACGCTATGTCAGAGAGAAAGCTTTTGACGAGGCCGTGTGAGGCAGTGAGCGAGTCAGATGGGGGATTACTGTACAAAAGAGGgaacgagagagaaaaagagactgtTCTAATTTTGGTCTGATTTCGCTGATGCGTTTAGGTCCCCAGCTGCCGCAGGTCTGGAACAGGGGcactggaaaacacaggaagCACTGAACATGCTCGGATGAGGTTGCACTAGAGTTTCGGTGATACGCCTGGCAAATGGTTAGCTGTTGTAACTCTGCTAATGCGGGAAAGTTCCAAATCTATAGAGAAACTAAGAGACTTTGTCtacatatttgaatatttgatgaAGGATCATGGCATAGCTAGGCTGGAGGCAGTGGTCGATAGTGAACGCAGACACTGCAGCTAATCATATTTCACATTAATATCAGAATATCCAACAGCAATATtgcacattaaattaaatttctgGGCATGTTTCTGCACTCTTATTAAATACATGCAGTAGACCTGCATGAGGCTCATCCAAAAGCAGAACAAATCAGCAGGTCAGTTGGTTGGATTTCTGCACCGCTACAGAATGATGGCCAGAAGTAACCAGAGGGAATCTTGACGCTAGGAAAGCTGCCTTGATTTAAAGCAGTTGAGGAACATAGCAGACATAGTGAGCTCTGGTCAACTCCTGCACAGGCTTTAACAAAGGAGTCCAGTTCTTGCAGAACTTCCGGACTTGGCTTTGATTGCCCAAGCGTGCATGCCGTGGTGCACTTGTGGTGCGCAGGGATAGACGCAAAAATATTACACTGGTGAACTCAGTGGAGGTGCATAGCAGTTTCCAGAGAAAGGGGATAGGAAGTGCGGATGGGGTAGAAACGAGCGGAGTATCAGAAGAGAGAACAGTGTGATGTCCCTTCCCAGAGAAGATCTGAATAAATTATGGCGGATGTTAACATCCTGTATGGCAGGAGACAATTTCAGTTCAggtttaacccttaaacttcttTGCCAAAGTTGTATTGATGTAAAATGAAGGAACATAATTTGGCGTAAAGGTTCACACTTATCACACACATCTCTGTTATAAACATGGTTCTTTTTTATGGAACAAAAGGTGGATCTTATATAGCACTGCACAAATAACCATTTAAAGCAGCTTCATTTTGCAAGATATTGTttgaaagagttttttttacaaatatagttTGTTTTCTCTGCTCCGAATCCGTTGAggagtttttaaacttttttacaccaaaaagtaaaaaattcaaGTGCACCAAAATTCATCTTAAGAAATCATATGAGAATGTTTTCTCTCAGCTTATTAGTCAGAGCTCTCTTGGGCAAGCAGTTTGGACAGAATTGGGACTAGATCCTAGATGCAACTCAGACTCAGCATGTGATATTTGgccctgaatttttttttatctggacaGATGTTTCACAAA

Function

symbol description
mgat3 Enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity. Involved in protein localization and regulation of cell migration. Predicted to be located in Golgi membrane.

NR:

description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

GO: NA

KEGG:

id description
K00737 MGAT3; beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231209.2 False 4407 mRNA 0.50 3 20384487 20463590
XM_022675528.1 True 4409 mRNA 0.50 3 20384487 20463595

Neighbor

gene id symbol gene type direction distance location
LOC103036891 NA coding downstream 106258 20233929 ~ 20278229 (-)
LOC103042289 mpv17l coding downstream 179798 20191862 ~ 20204689 (-)
c13h16orf45 cunh16orf45,c12h16orf45,clg09h16orf45,LOC103041783,LOC103355942,LOC101485480 coding downstream 193605 20143350 ~ 20190882 (-)
LOC103043840 LOC108424750 coding downstream 340099 20022421 ~ 20044388 (-)
ap1m2 ap1m2 coding downstream 375819 19997621 ~ 20008668 (-)
tab1 tab1 coding upstream 7681 20471276 ~ 20493343 (-)
LOC103039925 cacng2,cacng2a,LOC107561356,LOC107680886,LOC107732897,LOC107729558,LOC107687643 coding upstream 98604 20562199 ~ 20642333 (-)
eif3d eif3d coding upstream 217067 20680662 ~ 20691319 (-)
LOC103042187 si:zfos-169g10.2,sstr3,LOC108424687,LOC107705906,LOC107666722,LOC107737981,LOC107555103 coding upstream 254051 20717646 ~ 20750401 (-)
fam83f NA coding upstream 383545 20847140 ~ 20868990 (-)
LOC111193746 NA non-coding downstream 7891 20373157 ~ 20376596 (-)
G112439 NA non-coding downstream 154476 20229746 ~ 20230011 (-)
LOC107196873 NA non-coding downstream 159303 20127319 ~ 20225184 (-)
LOC111193743 NA non-coding downstream 185452 20197239 ~ 20199035 (-)
G112431 NA non-coding downstream 217555 20165723 ~ 20166932 (-)
G112525 NA non-coding upstream 30454 20494049 ~ 20536792 (-)
G112538 NA non-coding upstream 93961 20557556 ~ 20558339 (-)
G112547 LOC103040247,LOC108424720,LOC107737982,LOC107666673 non-coding upstream 233589 20697184 ~ 20700123 (-)
LOC111193676 NA non-coding upstream 247314 20710909 ~ 20711988 (-)
G112580 NA non-coding upstream 355844 20819439 ~ 20821014 (-)
G112507 NA other downstream 67150 20272000 ~ 20317337 (-)
trnae-uuc_17 NA other downstream 288476 20095940 ~ 20096011 (-)
LOC103032158 LOC108424749,LOC108273301 other downstream 290161 20056171 ~ 20094326 (-)
zglp1 NA other downstream 542195 19834408 ~ 19842292 (-)
G112280 NA other downstream 651114 19732604 ~ 19733373 (-)
LOC103040822 LOC108429994 other upstream 1118150 21581745 ~ 21585479 (-)
G112778 LOC103032844,LOC108430042,LOC108246801,LOC105893128 other upstream 1137649 21601244 ~ 21652734 (-)
LOC103026049 slc38a3b,slc38a3,LOC108411719,LOC107666102,LOC108271853,LOC107723914 other upstream 1912717 22376312 ~ 22430384 (-)
LOC111193749 NA other upstream 2010107 22473702 ~ 22477328 (-)
LOC111193684 NA other upstream 2130817 22594412 ~ 22605138 (-)

Expression


Co-expression Network