fam83f


Basic Information

Item Value
gene id fam83f
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 20847140 ~ 20868990 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231219.3
CTTACCTGAGTTTACCTGAAAGTATCACACAGGTGAGCTCAAGACAACACTGTGAACTAAACACACGTCAGCACGAGCGCTCGTACCGGACCTGCGTCGGTAACCGCGAGCCGCCGCGAGCCATGGCCGAGTCCCAGCTCGCGTTTATGGAAGATGGGCACGTGAACGAGAACATCCCCGAGTCGAAGCCCGAGTTCTACTACAGCGAGGAGCACCGCGTGGCTCTGGAGATCCTCCTGCGCGAGGGGGACGGGGCGTTCAAGACGCGCCTGGCCGAAGACAAGGCCAAAGACTTCCTGTCCGCGCGCGAGATCAAAGTGATCAGGAGCTCGGTGCTGCAGTACGACACGAACGAGGAGAcccaggaggaggaggagaagcgCGAGACCGCGCGAGAGGCAGAGCGGTCCGCGCGGGGTCGCGCCGGAGACACGCCCTCGCTGCGCTCCACGTACTGGCCGCAGATGTCGGACACGGAGGTCCCGGGGCTGGACCTGGGGTGGCCGCACGGGGGCTTTTTTCGGGGGGTCACGCGCGTCGCGGTCCACACCCACCCGCCCAAAGAGAACGGGCCGCACGTGAAGGAGGTCGTCCGGAGACTCATCCAGGAGGCCAGCAAGGTTATTGCCATCGTAATGGACCTCCTCACAGATCTCCAGATCCTGCAGGATCTACTGGACGCTTCGTCCAAGCGCAGGGTGCCCGTCTACATCATACTGGACATTCAGGGGGTTCCGCATTTCCTTGACATGTGCAACAGACTGCAGGTCAACTCTCAGCAGCTACAGTACATTCGGACGCGGACGGTGAGAGGCATAGGAATGGGTCTGTCATTTGGAAGGATCCCTGGGAGCTTATGCAGCAAATACATGCTTATAGACGGAGACAAAGTCATGTTTGGATCGTACAGCTTTTCTTGGTCATCGTCTCGTATGGACCGGAACATGATCACCATAATGTCCGGCCAGATAGTCGACTTCTATGACAACGACTTCAGGGAGCTTTACGCGATCTCGGAAAAGCTAGACCTCTTTAAAGAATTCCACATCAGTAAAACCAACACCGGGACCCTGGGCCGGGCGCCCGTACCCAAGCGGCCCACTTTACCCGCCACCTCTCGCTTCCAAGTCAGCCTGGGAGACGCGGGAACCCTGAAAGTGCCAGAACACAAATACTACAACCCAAAGTACATGCTGGCGTTTGCTGAGATTCCCGGACCCAGAGGCTCCCTGCCTGACCTCTCTGGTAAGAAGCAGGCAGAAGCATCTCCTGAGGAACTTGCCTCAGAGAGGACTCCAGTACAGGGGGGCAGTGAAAAAATGAACACCTTGGCCAGAACAGCTTCTCCAGCAGCAGAAGGGACCATGAAAAAGTTTTCActtttcaacaaaaaaacacgAAACTCTCAAAAATCCAAGAGCAAAAGCAAGGACGGTGcaggagcagcggaagctggtGAGGAAGGGTCTCCCTGTGCCTCTTTTATCAGTAACTCTGCACTAGAGGATCGTACAAACAGCCCACATTCAAAAGCAAAGAACAAGAAGCTCAATAAGAAAAGCAGCTCATCACAACAAACGGTCAACAGCCAGGCAGAACAAGgtTCGAAAGGCCGCAAACGTTCAAAGAATAAATGCTCTCAGTCCTGAGAAACCGGATTTAACTCTAGCAGTACTGTGTCCACAGGACTTCTGATCATTAACTACACTCTCTGATGCAAACAAAAGATTTTCAATGGTTTAATGGAAATCTTGATTAAAGGTTTCTAGTGTA

Function

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231219.3 True 1773 mRNA 0.54 5 20847140 20868990

Neighbor

gene id symbol gene type direction distance location
LOC103042187 si:zfos-169g10.2,sstr3,LOC108424687,LOC107705906,LOC107666722,LOC107737981,LOC107555103 coding downstream 96739 20717646 ~ 20750401 (-)
eif3d eif3d coding downstream 155821 20680662 ~ 20691319 (-)
LOC103039925 cacng2,cacng2a,LOC107561356,LOC107680886,LOC107732897,LOC107729558,LOC107687643 coding downstream 204807 20562199 ~ 20642333 (-)
tab1 tab1 coding downstream 353797 20471276 ~ 20493343 (-)
mgat3 mgat3,LOC103038268,LOC107705910 coding downstream 383545 20384487 ~ 20463595 (-)
LOC103042502 NA coding upstream 2665 20871655 ~ 20891346 (-)
LOC103031880 LOC103031880,LOC108430001,LOC108272922 coding upstream 609112 21478102 ~ 21486266 (-)
LOC111193678 NA coding upstream 634016 21503006 ~ 21507152 (-)
LOC103040199 mob4,LOC103040199,LOC106586370,LOC105016277,LOC107389570,LOC106582314,LOC105899369 coding upstream 653619 21522609 ~ 21533074 (-)
LOC103041116 LOC108429995,LOC101466508,LOC102201470,LOC105357607 coding upstream 699536 21568526 ~ 21570309 (-)
G112592 NA non-coding downstream 1157 20844803 ~ 20845983 (-)
G112587 NA non-coding downstream 11403 20834829 ~ 20835737 (-)
G112580 NA non-coding downstream 26126 20819439 ~ 20821014 (-)
LOC111193676 NA non-coding downstream 135152 20710909 ~ 20711988 (-)
G112547 LOC103040247,LOC108424720,LOC107737982,LOC107666673 non-coding downstream 147017 20697184 ~ 20700123 (-)
G112607 NA non-coding upstream 17363 20886353 ~ 20886810 (-)
G112698 LOC103031562,LOC108430012,LOC103371798,LOC108272920 non-coding upstream 561992 21430982 ~ 21454916 (-)
G112725 NA non-coding upstream 622508 21491498 ~ 21493415 (-)
LOC111193677 NA non-coding upstream 626319 21495309 ~ 21502890 (-)
LOC111193680 NA non-coding upstream 674496 21543486 ~ 21550102 (-)
syngr1 syngr1 other downstream 291713 20458758 ~ 20555427 (-)
G112507 NA other downstream 529803 20272000 ~ 20317337 (-)
trnae-uuc_17 NA other downstream 751129 20095940 ~ 20096011 (-)
LOC103032158 LOC108424749,LOC108273301 other downstream 752814 20056171 ~ 20094326 (-)
zglp1 NA other downstream 1004848 19834408 ~ 19842292 (-)
LOC103040822 LOC108429994 other upstream 712755 21581745 ~ 21585479 (-)
G112778 LOC103032844,LOC108430042,LOC108246801,LOC105893128 other upstream 732254 21601244 ~ 21652734 (-)
LOC103026049 slc38a3b,slc38a3,LOC108411719,LOC107666102,LOC108271853,LOC107723914 other upstream 1507322 22376312 ~ 22430384 (-)
LOC111193749 NA other upstream 1604712 22473702 ~ 22477328 (-)
LOC111193684 NA other upstream 1725422 22594412 ~ 22605138 (-)

Expression


Co-expression Network