inha (inha,LOC107586362)


Basic Information

Item Value
gene id inha
gene name inha,LOC107586362
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 8021047 ~ 8024573 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244240.2
GGCCTTCCACGGTCAAGGACAGGGTATTATAACAATTCCCCAGACTGGTCTATCTCACTGGCCTCTTCCCCACGTGTCCTCAGCGATAGTGTGAACCCAAATACAAGCGTCAAATACGTGATGCACTCGTAGGAGGATCTGTAGGAAGCAAAGGAACTAGAGATAGAGAGAACTGAGAGAACAGAGAAAGGAGAGAAGTTTACAGGCTTACAACACTTTTGGATAAATTGAGTTTGTTCTGAGCAGTCGAGCAAGCGTTTTGTGTCAGTTTAGAGATTTTTTTGCTGGAGATTATCTGTTTTTGTTGGATTTAACACCATGCATCACCTCCCTCTGTTCACCTGTACTCTGATCACTCTGACCGTGCTCACTGATCTTCAGTCTCAAGCCTGTCCAGAAGAAGCTGTCCCTCGGGAGGTGGTGCTGGACTGGCTGAGGAGGACCATCCTGGAGAGGCTCGGGCTGGACGGGCCACCGGAACCCGTGCCGTTGAGGTCCAGCGGAGAGAGGCTGGAGAGAGAAGCCCAGCATGGAGCTCCACGAGTGAGCAGAGAGGCCAGAGTGGAGCGCAGACAGCATCAGGAGACCTCCCAGGTCATTCTGTTCCCCAGCTCCGACTCCACCTGTCTGGGCCTCTCCTCCTCAGAAACCTCCTCCAGCCACTTCACCTACTACTTCCAGCCGTCTCTGGACAGCCAGGAGTCCGTCATCACCTCCGCCCACTTCTGGTTCTATGCAGGAGAGACCATCGCTGGGGATACCAACCCAGCCCCGCTCTACATCCTCACCTCTCATCAGGAGCTGCTCCAGGTGGCCAACAAGCCGGTGAAGCGCAGCCCTGATGGATGGACCACCTACAGGCTGGACCGCCACCTCCACGCTGCCATGGCTGATGGGCCGTTCATGCTGCAGGTCCGATGCCCGGCCTGTCGGTGTTACAGCTCAGAGGAGGATAAGACTCCCTTCATGCATCTTCACACCAGGCCTCAGGGTCCTGACCGCTCCCGCCGGGCCCCCAGCGTCCCCTGGTCCCCGTCTGCCATCGAGAAGCTCCAGAGACCCTCGTCTGACGGCCCCGGCTCCGACTGCAGGAGGGAGCAGATCGAGATCTCGTTTCAGGAGCTGGGCTGGGAGAACTGGATCGTGCACCCGAAGGTGTTCACCTTTCACTACTGCCACGGGAACTGCTCCAGCCCCGAGCGCATGACCACCCTGCTGGGGTTAAACCAGTGCTGCGCTCCGGTTCCTGAGAGCATGAAGTCCCTGCGCTTCACCACCACCACTGATGGAGGATTCTCCTTCAAATACGAGACCCTGCCCAACATCATCCCAGAGGAGTGCAACTGCATCTgattcaaccaatcagatcatattctttatattctatattctaaaCTTTTCTAAacgttttattagttttttgatATATTTATAACTTTTCTAATGTATAtcaacattaaaaacaacacaTCCCTAGTgttatatacttaaaaatatacttaattgtac

Function

symbol description
inha Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in gonad. Human ortholog(s) of this gene implicated in prostate carcinoma. Orthologous to human INHA (inhibin subunit alpha).

NR:

description
PREDICTED: inhibin alpha chain isoform X2

GO: NA

KEGG:

id description
K05500 INHA; inhibin, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244240.2 True 1509 mRNA 0.53 3 8021047 8024573

Neighbor

gene id symbol gene type direction distance location
obsl1 NA coding upstream 74908 7910585 ~ 7946139 (+)
slc19a1 slc19a1 coding upstream 166984 7843175 ~ 7854063 (+)
LOC103042636 rbm46 coding upstream 235953 7779301 ~ 7785094 (+)
LOC103044198 ccdc80,LOC108437683,LOC107565956 coding upstream 343960 7668378 ~ 7677087 (+)
LOC103031557 iqca1,LOC108437680,LOC107586319,LOC106590510 coding upstream 600708 7353459 ~ 7420339 (+)
arpc2 arpc2,LOC106575630,LOC106574678 coding downstream 328603 8353176 ~ 8371385 (+)
LOC103042259 NA coding downstream 356547 8381120 ~ 8389184 (+)
LOC103041643 LOC108436449,LOC107749392,LOC107678319 coding downstream 394525 8419098 ~ 8502565 (+)
LOC103021389 LOC108436447,LOC103363665,LOC106926458,LOC106956952 coding downstream 580411 8604984 ~ 8610336 (+)
LOC103044816 LOC108412428 coding downstream 675273 8699846 ~ 8703563 (+)
G109628 NA non-coding upstream 68786 7948961 ~ 7952261 (+)
G109627 NA non-coding upstream 72851 7947555 ~ 7948196 (+)
G109595 nomo,LOC108438153,LOC107677623,LOC107733372,LOC107688882,LOC107562229 non-coding upstream 250688 7769378 ~ 7770359 (+)
G109564 NA non-coding upstream 257287 7679881 ~ 7763760 (+)
G109561 psmb3,LOC102792592 non-coding upstream 324725 7692523 ~ 7696322 (+)
G109650 NA non-coding downstream 22369 8046942 ~ 8048041 (+)
G109651 NA non-coding downstream 23919 8048492 ~ 8049386 (+)
G109661 NA non-coding downstream 79724 8104297 ~ 8152380 (+)
G109666 NA non-coding downstream 160077 8184650 ~ 8188574 (+)
G109691 NA non-coding downstream 375194 8399767 ~ 8477373 (+)
G109613 NA other upstream 159615 7860820 ~ 7861432 (+)
LOC103043571 NA other upstream 320741 7697110 ~ 7700306 (+)
gbx2 gbx2,LOC107596335,LOC103389863 other upstream 572057 7441969 ~ 7448990 (+)
G109527 NA other upstream 751455 7267871 ~ 7269592 (+)
blcap blcap,bc10 other upstream 1035555 6944765 ~ 6985492 (+)
igfbp2 LOC108438161 other downstream 67706 8092279 ~ 8124872 (+)
G109669 LOC108438163 other downstream 172397 8196970 ~ 8199977 (+)
G109707 NA other downstream 525541 8550114 ~ 8561274 (+)
LOC103038228 pbx1,pbx1b,LOC108272157,LOC108443834,LOC104918287,LOC107677498 other downstream 1491902 9516475 ~ 9630237 (+)
G110492 trak2,LOC108430857,LOC107746594,LOC108271640,LOC107582328 other downstream 2940292 10964865 ~ 10973269 (+)

Expression


Co-expression Network