CI01000012_12521676_12524692


Basic Information

Item Value
gene id CI01000012_12521676_12524692
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12521676 ~ 12524692 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_12521676_12524692.mRNA
AAAAGTTTTCTCCAAGCTGAACTTTCATATACCTGAGGACTTGGTGAAGAAAATTGTGGTCAACACAGCAGGCTACATTGAACCAGTCCTTTGCTCTCTGAGAGAGAAGATAGAGGAAAAGAGAGCAGGAAAACAATTAGATGGCACACAGGACTTGGAATATTACAGCACAACAAATGGACAGCCGAGAACAGTGAATCATCTGATGGTTTTTGAGACCACTCCAGCCACCAATCAAGCCACCGTGAAGATAACAGACAAAGTCAGTGCTGCTGCAGCCTTGGGAACAAATGTGGATCCATCTGTCCGTTTACTCTTGGAGGAAAAGGAGCAAGCCATTTTGGCTTTACAGCAGACTGTTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_12521676_12524692.mRNA True 364 mRNA 0.45 4 12521676 12524692

Neighbor

gene id symbol gene type direction distance location
CI01000012_12490611_12503873 CFAP43 coding downstream 17803 12490518 ~ 12503873 (-)
CI01000012_12467799_12485431 COL17A1B coding downstream 34585 12467229 ~ 12487091 (-)
CI01000012_12437305_12438138 NA coding downstream 83054 12437152 ~ 12438622 (-)
CI01000012_12434858_12435727 NA coding downstream 85441 12433898 ~ 12436235 (-)
CI01000012_12427476_12429642 DUSP13A coding downstream 91824 12427261 ~ 12429852 (-)
CI01000012_12526785_12534198 ADAM8 coding upstream 2093 12526785 ~ 12534198 (-)
CI01000012_12540676_12541954 MSX3 coding upstream 15540 12540232 ~ 12542559 (-)
CI01000012_12587953_12589094 FUOM coding upstream 63001 12587693 ~ 12589364 (-)
CI01000012_12592469_12594321 ECHS1 coding upstream 67266 12591958 ~ 12595201 (-)
CI01000012_12598963_12604426 LGALSL coding upstream 72912 12597604 ~ 12605372 (-)
G77014 NA non-coding downstream 456701 12064562 ~ 12064975 (-)
G76966 NA non-coding downstream 575147 11945062 ~ 11946529 (-)
G76956 NA non-coding downstream 616941 11904512 ~ 11904735 (-)
G76914 NA non-coding downstream 621295 11897330 ~ 11900381 (-)
G76951 NA non-coding downstream 635999 11885447 ~ 11885677 (-)
G76994 NA non-coding upstream 127674 12652366 ~ 12665651 (-)
G77128 NA non-coding upstream 180647 12705339 ~ 12705552 (-)
G77134 NA non-coding upstream 194254 12718946 ~ 12719187 (-)
G77149 NA non-coding upstream 256068 12780760 ~ 12781057 (-)
G76982 NA non-coding upstream 373663 12898355 ~ 12899359 (-)
CI01000012_12079581_12084139 NA other downstream 437416 12078936 ~ 12084260 (-)
CI01000012_12047175_12052116 NA other downstream 469469 12046728 ~ 12052541 (-)
G75608 NA other downstream 1900805 10611915 ~ 10620871 (-)
G74982 NA other downstream 2945704 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 3119708 9398076 ~ 9402378 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other upstream 429754 12954446 ~ 12957833 (-)
G77287 NA other upstream 1094584 13619276 ~ 13633819 (-)

Expression


Co-expression Network