G188098


Basic Information

Item Value
gene id G188098
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 8237728 ~ 8239604 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU255075
tttgttttgttttataaagttATATTATTGTGAATGAAACTGTGGCAAATCCCTAACCTGTATCATGACAATAGAGGATTTTTATTCTAgtgtattataatacattttttggcTGCTCAGTGACCAGTCTGTGGACATACTGACCTGGGAGGCAGTCCAGATGATGGTCACATGGTTCAATGATTTCAGCGTCAGTCGTGTTGCCATTGCTCATGTTCTTGCTGCGCCGCTTGTCTTTttttcttgTTGGATGGCCAGTTGTCCACAGGCCTCATGTCTTCATAGTCTGTCCAGTCAAATAGAGCCATGTCCAAAGTGGGCTGCACCTCCCCTTGACCTTTTCCTCGACTTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255075 True 355 lncRNA 0.43 2 8237728 8239604

Neighbor

gene id symbol gene type direction distance location
LOC103022868 rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 coding downstream 98199 8121737 ~ 8139529 (-)
LOC103034269 LOC108438618,LOC108414439 coding downstream 781746 7434144 ~ 7455982 (-)
LOC103035242 NA coding downstream 859137 7376559 ~ 7378591 (-)
LOC103036072 phactr3,LOC108254891 coding downstream 894507 7229473 ~ 7343221 (-)
LOC103037403 NA coding downstream 1032337 7197200 ~ 7205391 (-)
LOC103046978 LOC108414459 coding upstream 48314 8287918 ~ 8326276 (-)
LOC111195367 LOC106511942 coding upstream 1496744 9736348 ~ 9738497 (-)
c22h1orf158 LOC103033413 coding upstream 1604514 9844118 ~ 9899592 (-)
LOC103033950 NA coding upstream 1663356 9902960 ~ 9928421 (-)
LOC103046340 NA coding upstream 1736129 9975733 ~ 9996465 (-)
G188066 NA non-coding downstream 146041 8091432 ~ 8091687 (-)
G188055 NA non-coding downstream 187632 8049256 ~ 8050096 (-)
G188042 NA non-coding downstream 346376 7881289 ~ 7891352 (-)
G188030 NA non-coding downstream 491228 7740225 ~ 7746500 (-)
G188016 NA non-coding downstream 546407 7690653 ~ 7691321 (-)
G188109 NA non-coding upstream 68806 8308410 ~ 8322833 (-)
G188118 LOC103047485,LOC108414460 non-coding upstream 92581 8332185 ~ 8347336 (-)
G188123 NA non-coding upstream 100159 8339763 ~ 8342249 (-)
G188165 NA non-coding upstream 241717 8481321 ~ 8500934 (-)
G188171 NA non-coding upstream 430419 8670023 ~ 8670397 (-)
ghrh ghrh,LOC103034597,LOC108438619 other downstream 817922 7409122 ~ 7419806 (-)
G187946 mybl2,mybl2b other downstream 846702 7388397 ~ 7391026 (-)
pdrg1 pdrg1 other downstream 1044476 7188616 ~ 7193252 (-)
LOC111195363 snrpe other downstream 1254888 6977651 ~ 6982840 (-)
svbp svbp other downstream 2714807 5518793 ~ 5522921 (-)
LOC111195437 NA other upstream 1711480 9951084 ~ 9956317 (-)
G188898 NA other upstream 2751213 10990817 ~ 10991394 (-)
G189055 NA other upstream 3804309 12043913 ~ 12044293 (-)
eogt eogt,LOC107729408 other upstream 3920938 12160542 ~ 12178610 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other upstream 4058445 12298049 ~ 12395532 (-)

Expression


Co-expression Network