Gene
RNA
| Item | Value |
|---|---|
| gene id | G188220 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 9125091 ~ 9125536 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| description |
|---|
| PREDICTED: sodium channel subunit beta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU255249 | True | 446 | lncRNA | 0.40 | 1 | 9125091 | 9125536 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103046978 | LOC108414459 | coding | downstream | 798815 | 8287918 ~ 8326276 (-) |
| LOC103022868 | rap1b,rap1a,rap1ab,LOC105901888,LOC106566052,LOC107560426,LOC107742898 | coding | downstream | 985562 | 8121737 ~ 8139529 (-) |
| LOC103034269 | LOC108438618,LOC108414439 | coding | downstream | 1669109 | 7434144 ~ 7455982 (-) |
| LOC103035242 | NA | coding | downstream | 1746500 | 7376559 ~ 7378591 (-) |
| LOC103036072 | phactr3,LOC108254891 | coding | downstream | 1781870 | 7229473 ~ 7343221 (-) |
| LOC111195367 | LOC106511942 | coding | upstream | 610812 | 9736348 ~ 9738497 (-) |
| c22h1orf158 | LOC103033413 | coding | upstream | 718582 | 9844118 ~ 9899592 (-) |
| LOC103033950 | NA | coding | upstream | 777424 | 9902960 ~ 9928421 (-) |
| LOC103046340 | NA | coding | upstream | 850197 | 9975733 ~ 9996465 (-) |
| aadacl4 | NA | coding | upstream | 873779 | 9999315 ~ 10021677 (-) |
| G188218 | NA | non-coding | downstream | 60372 | 9064354 ~ 9064719 (-) |
| G188214 | NA | non-coding | downstream | 97229 | 9027548 ~ 9027862 (-) |
| G188212 | NA | non-coding | downstream | 100247 | 9024490 ~ 9024844 (-) |
| G188204 | NA | non-coding | downstream | 113320 | 9010345 ~ 9011771 (-) |
| G188199 | NA | non-coding | downstream | 192771 | 8929878 ~ 8932320 (-) |
| G188223 | NA | non-coding | upstream | 47853 | 9173389 ~ 9173660 (-) |
| G188224 | NA | non-coding | upstream | 59375 | 9184911 ~ 9185111 (-) |
| G188225 | NA | non-coding | upstream | 64042 | 9189578 ~ 9189793 (-) |
| G188307 | NA | non-coding | upstream | 669241 | 9794777 ~ 9796290 (-) |
| G188317 | NA | non-coding | upstream | 704251 | 9829787 ~ 9830177 (-) |
| ghrh | ghrh,LOC103034597,LOC108438619 | other | downstream | 1705285 | 7409122 ~ 7419806 (-) |
| G187946 | mybl2,mybl2b | other | downstream | 1734065 | 7388397 ~ 7391026 (-) |
| pdrg1 | pdrg1 | other | downstream | 1931839 | 7188616 ~ 7193252 (-) |
| LOC111195363 | snrpe | other | downstream | 2142251 | 6977651 ~ 6982840 (-) |
| svbp | svbp | other | downstream | 3602170 | 5518793 ~ 5522921 (-) |
| LOC111195437 | NA | other | upstream | 825548 | 9951084 ~ 9956317 (-) |
| G188898 | NA | other | upstream | 1865281 | 10990817 ~ 10991394 (-) |
| G189055 | NA | other | upstream | 2918377 | 12043913 ~ 12044293 (-) |
| eogt | eogt,LOC107729408 | other | upstream | 3035006 | 12160542 ~ 12178610 (-) |
| mapkapk3 | mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 | other | upstream | 3172513 | 12298049 ~ 12395532 (-) |
