LOC103025797 (trim62,LOC107756651,LOC107712973,LOC107582411)


Basic Information

Item Value
gene id LOC103025797
gene name trim62,LOC107756651,LOC107712973,LOC107582411
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 4727289 ~ 4794776 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251435.2
GCTGTGCTCCGCTCCTCCCTGGACTCGGCTGCGCTCAGTCGGGGATTGAGGAGCAGCGGGagcggagagcgcggagctcGGCGGGCGGACAGGCGAACAGGCGGACGGGCTGGAGCTGGCGGGTATTACCACAGATAAAACACCACCCTGACATGCGGATAGGCGGACCGGGGCTGGTTTGAGCTGTGGACCGGACCGGGACTGTGTGGAGTAAGCGGACTGAGCGCGGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt
>XM_022682280.1
GCTGTGCTCCGCTCCTCCCTGGACTCGGCTGCGCTCAGTCGGGGATTGAGGAGCAGCGGGagcggagagcgcggagctcGGCGGGCGGACAGGCGAACAGGCGGACGGGCTGGAGCTGGCGGGTATTACCACAGATAAAACACCACCCTGACATGCGGATAGGCGGACCGGGGCTGGTTTGAGCTGTGGACCGGACCGGGACTGTGTGGAGTAAGCGGACTGAGCGCGGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGAGAGCAAGTGATTCGTGGAGGGTTTTGCTGGTGGAAGCTACCAAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt
>XM_022682281.1
GCTGTGCTCCGCTCCTCCCTGGACTCGGCTGCGCTCAGTCGGGGATTGAGGAGCAGCGGGagcggagagcgcggagctcGGCGGGCGGACAGGCGAACAGGCGGACGGGCTGGAGCTGGCGGGTATTACCACAGATAAAACACCACCCTGACATGCGGATAGGCGGACCGGGGCTGGTTTGAGCTGTGGACCGGACCGGGACTGTGTGGAGTAAGCGGACTGAGCGCGcaGGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGAGAGCAAGTGATTCGTGGAGGGTTTTGCTGGTGGAAGCTACCAAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt
>XM_022682282.1
GCGCTCAGTCGGGGATTGAGGAGCAGCGGGagcggagagcgcggagctcGGCGGGCGGACAGGCGAACAGGCGGACGGGCTGGAGCTGGCGGGTATTACCACAGATAAAACACCACCCTGACATGCGGATAGGCGGACCGGGGCTGGTTTGAGCTGTGGACCGGACCGGGACTGTGTGGAcaGGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGAGAGCAAGTGATTCGTGGAGGGTTTTGCTGGTGGAAGCTACCAAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt
>XM_022682283.1
GCGCTCAGTCGGGGATTGAGGAGCAGCGGGagcggagagcgcggagctcGGCGGGCGGACAGGCGAACAGGCGGACGGGCTGGAGCTGGCGGGTATTACCACAGATAAAACACCACCCTGACATGCGGATAGGCGGACCGGGGCTGGTTTGAGCTGTGGACCGGACCGGGACTGTGTGGAGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGAGAGCAAGTGATTCGTGGAGGGTTTTGCTGGTGGAAGCTACCAAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt
>XM_022682284.1
acagcttcattccagaagctcaGGTCTACCAAAGAAACGGAAGGCAGGACAATCACAGAAACAGAAGAAGCAAGGATAAGAAGCTGAGACGGGAGTGAAAAGACAGAGGAAAGAACATTTTTCAGTCCAGCGGTTTCAGTCCATCTCTCGAGAACTTGTTAAGTAGAAGATTTccacaacacacagacacacacacggctAGGCCAGCGCTGCAGTCTTTCAGTTCtctgaatactgaatgtactggCCCCTCCATACATGCAAATGGCTTGTTGTCTGAAGGACGAGCTCCTGTGTTCGATTTGCCTGAGCATCTACCAAGACCCGGTGAGTTTCGGTTGCGAGCACTACTTCTGCCGAAAGTGCATCACAGAGCACTGGAACCGGCAGGAGCACCACGGCACGCGGGACTGCCCGGAGTGCAGGAGGACCTTCACAGACCCGCTTCTCTCGCCGAGCCTCAAACTCTCCAACATCGTGGAGAGGTACTCGGCCTTTCCCCTGGACGCCATCCTCAACGCCCAGAGGAGCTCCTACCCGTGCAAGGACCACGAGAAGGTCAAGCTCTTCTGCCTCAGCGACAAAAGCCTGGTCTGCTTCTTCTGCGATGAGCCTGCCTTACACGAGCAGCACCAGGTTACCACCATCGACGAAGCCTTTGAGGAAATACAGAGGGAGATGAAGGAGCAGCTGGCGGCTCTGCAGGACAGCGAGAAGGGTCACACAGAGGCgctgcagctgctgcagagGCAGCTCACTGAAACCAAGTCTTCAGCGAAGAGCCTGCGGGCGACTATCGGCGAGGCGTTTGAGCGACTGCACCGTTTCCTGCGCGAGAGGCAGAAGAGCATGCTGGAGGAGCTGGAGTCGGACACGGCTCGCACGCTTACTGACATAGAGCACAAGATCCAGCGCTACAGCCAGCAGCTCCGCGACGTCAAGGAGGGCATCCAGATACTGCAGGATAAGCTGAGCGAGACCGGCCGACACGAGTTCCTGGAGGGAGTGGCCCTCACCTCCGATAGAGAGCAAGTGATTCGTGGAGGGTTTTGCTGGTGGAAGCTACCAAGaataaaaggGAAAATACATGAAACCAACCTTACTTATGAAGACTTCCCCACGTCCAAATACATGGGGCCACTGCAGTACACGATCTGGAAGTCTCTGTTCCAGGATATCTCCCCAGTGCCTGCAGCCTTGACACTAGATCCCGTGACCGCCCACCAGAGGCTGATACTGTCTGACGACTGCACCATAGTGGCGTACGGGAACCTCCACCCGCAGCCGCTGCAGGACTCGCCGCGTCGCTTCGACGTGGAGGTATCCGTGTTAGGAGCTGAAGGTTTCTGCGCAGGCGTCCACTACTGGGAGGTGATGGTCTCGGAGAAGACTCAATGGATGATTGGCGTGGCCAACGAGACGGTCAACCGCAAGGGCAGCATCCAGATACAGCCCAGCCGCGGCTTCTACTGTATAGTCATGCACGACGGGAACCAATACAGCGCCTGCACCGAGCCCTGGACCCGCCTCAACGTCAAAAGCAAACTGGAGAAAGTGGGCGTCTACCTGGACTACCCTAAAGGTCTGCTGGTTTTCTACAACGCTGACGATATGTCCTGGCTCTACACCTACCGAGAGAAGTTTTCCGCCAAGCTCTTCCCGTACTTCAGCCCCGGGCAGAGCCACGCCAACGGAAAGAACGTGCAGCCCCTGCGGATCAACACGGTGCGTCTATAGGACCCAGCAGACTGAGCAGGCCAACTGAGCCAGGCTGAGAATCTGATTCAGGCTGAGAAAGAACAATAGATTTATATtctgtcattttttcttttttccttttttttttt

Function

symbol description
trim62 Enables identical protein binding activity; transcription coactivator activity; and ubiquitin-protein transferase activity. Involved in several processes, including negative regulation of viral transcription; positive regulation of NF-kappaB transcription factor activity; and positive regulation of antifungal innate immune response. Is active in cytoplasm.

NR:

description
PREDICTED: E3 ubiquitin-protein ligase TRIM62 isoform X1

GO: NA

KEGG:

id description
K12030 TRIM62; tripartite motif-containing protein 62

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251435.2 False 2007 mRNA 0.57 6 4727289 4794776
XM_022682280.1 False 2052 mRNA 0.56 7 4727289 4794776
XM_022682281.1 True 2055 mRNA 0.56 7 4727289 4794776
XM_022682282.1 False 2007 mRNA 0.56 7 4727319 4794776
XM_022682283.1 False 2004 mRNA 0.56 7 4727319 4794776
XM_022682284.1 False 1847 mRNA 0.55 7 4729091 4794776

Neighbor

gene id symbol gene type direction distance location
tnfrsf1b NA coding upstream 10313 4698528 ~ 4716976 (+)
LOC111195358 NA coding upstream 61253 4651531 ~ 4666036 (+)
miip NA coding upstream 78857 4627942 ~ 4648432 (+)
fam213b fam213b,LOC107702003,LOC107582414,LOC107712975 coding upstream 152735 4560302 ~ 4574554 (+)
LOC103028044 NA coding upstream 189354 4533812 ~ 4537935 (+)
LOC103024549 LOC103024549,LOC108441419,LOC107756648,LOC107654396,LOC107592863,LOC107582410,LOC107654432 coding downstream 31318 4826094 ~ 4841765 (+)
LOC103025087 NA coding downstream 65093 4859869 ~ 4869789 (+)
LOC103023712 NA coding downstream 78253 4873029 ~ 4884366 (+)
tnfrsf9 NA coding downstream 92743 4887519 ~ 4895041 (+)
LOC103023081 LOC108441425 coding downstream 142218 4936994 ~ 4940065 (+)
G187281 NA non-coding upstream 143959 4549931 ~ 4583330 (+)
G187276 NA non-coding upstream 187089 4538261 ~ 4540200 (+)
G187266 NA non-coding upstream 254906 4471638 ~ 4472383 (+)
LOC111195359 NA non-coding upstream 355999 4370428 ~ 4371290 (+)
G187199 NA non-coding upstream 512344 4214595 ~ 4214945 (+)
G187306 NA non-coding downstream 2152 4796928 ~ 4797556 (+)
G187305 NA non-coding downstream 2840 4797616 ~ 4800508 (+)
G187307 NA non-coding downstream 6330 4801106 ~ 4801906 (+)
G187400 NA non-coding downstream 77589 4872365 ~ 4872778 (+)
G187399 NA non-coding downstream 146249 4941025 ~ 4949650 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 1332446 3392387 ~ 3394843 (+)
G186880 lmcd1 other upstream 1725274 2980497 ~ 3002015 (+)
podxl2 NA other upstream 3631952 606833 ~ 1095337 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other upstream 4189073 510575 ~ 538216 (+)
G186231 NA other upstream 4612202 107396 ~ 115087 (+)
p3h1 NA other downstream 985115 5779891 ~ 5798979 (+)
LOC103029365 NA other downstream 2282389 7077165 ~ 7098672 (+)
trnaq-uug_4 NA other downstream 2397378 7192154 ~ 7192226 (+)
LOC111195452 NA other downstream 3317227 8112003 ~ 8113242 (+)
agtrap agtrap other downstream 3462020 8256796 ~ 8271712 (+)

Expression


Co-expression Network