fbln2 (fbln2)


Basic Information

Item Value
gene id fbln2
gene name fbln2
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 16306852 ~ 16403416 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682836.1
AACAGCTTTTCCCAACTTTGTCTCAGAATGGGACTCTTCAAGTTTCTACTTTTGCTTTCTATAAGCAGCTGCCTCTGCCAGAAGGACTGCACTGGAGTGGATTGCCCTGATCTTAAGAACTGCATTGATGAAGTTCTAGAAAACGGCGCCTGTTGTGCCACTTGCATGCAAACTGGCTGCATGTGCGAAGGCTACCAGTACTACGACTGTGTGAACGCCGGCTTCAGAAAAGGAAAAGTACCAGAAGGAGAGTCTTACTTTGTGGATTTTGGAAGTACAGAATGCTCTTGCCCAAAAGGCGGCGGACGGATCAGTTGCCATTTCATCCCTTGTCCAGAACTTCCGGCCAATTGCATCGACGTTTCAGAGCCTGCGGACGGGTGTAGTCAATGCGAACGGATCGGTTGCGTCTACGAAGAGCAGAAGTACGAAGCTGGCCATTCTTTCCACATGGACCCTTGCCAGGTCTGCCATTGCCCCAACGATGGCGGAAATTTAATGTGCTACCCGATCCCAGATTGCGACCGGAGGAAGGTTCACAAGCCAATGCTGGCGACTACAACTGAGGAGAACCTTCCGCGGAGGCGCCACAATGAACCCATCCGGAATATCTTCAACGCTCATGGCTCGAGAGCTTCGTTCTCCAAACCTTTCCCAGTGTCTCACAGAGACAACCTGCCTCCTTTTAAACTGAACCCTCGCCCAAGCCAAATCGAACGAGTAGAAGAAGAAGCAAAAGCAGAAAAAGTTGCAGAAGACGTGGAAGACATAGAGGAAGAAGACTATGACTACCCTACTACTACTTCTTCAGACTCCTTGGAGCCTTCTTTAGAGCCTGACCTTGCCTCTTCTACTACAGACCCAACCATTATCTCAGGTTCTTATCCTGAGAATGTTACAGCCCATCAAACCATCCATAGAGGCGCCAAGCAGGAGCTCAAGGAGAGATTAGGCTTTCATGAAGCGACTACTGAGAGACCATGGTTTCCTTTACACAAGAACGATAGGACAGAGAAAGAAGAGGCAAGAAAGAGAACTTCTCACAAAAAAGACATCTCAAACTCTCACCCTGAGATCGATACCTTAAAGATTTCCAAAGATGACTCTTTGGAAGGAGGCAAGTTGAAATTCCCTGAAGAAAGTCCAAACGAAGAGAACTTTCCCATCTACAGAGAACCCACGTACGAAGAACAGTTTTCTATTGACAGGGAAAGAAGCTCAGAAAGGCAAAGTTTTGGTCTTTACAAAGACAACGTCAGCGAGGAGACTACGCCACTTGAGGAAGGCAATCTTGATAGCGAAGGACAGCTTGTCGCTCCTACAGAACCAACGGTTGGTGAGATTTTTGACCTCTACGAGGATACAACTTACAGTGAAGCAATAACCGATTCAACAACGGTTGAGGAAACCACTACATTATCACCTCAACTTCTAGAAAAAGAGGTACAACCAGAGATCACGACAACATCGCAATCTCTTATCAGCACTAGCACTCTTCAAAGTCAACCAACCACACCAGAAGATTGGGAGATTTACACCAGAGAGATTGAAGAAGACGCTCTATCAAAAGAAGAGGTCAAAAATGAGGAAAATTTCCTGATCATAAGTAATGTGACAGATGTTGGTAAAGATAGTAAACCAGATGAAAACAGTATCCTAAACTCATTCAGAGACATTCAGAAGAGCATCTCAGCATCTCCAGTGACAACTTCAGGAATTGTTTCAGAACAGGACAGAGCAGAACCTGAGATCACTACGGTTCCATTCGAGAGATTGAGCCCCACCAGCTCACCATCCTTGAAAGCAAAGGTGGACAAAGATGGACAATCAGAAGTCAAACAGTCGCAAAGCCTGTTTGATAACGTTGATTTAAGGGAGGAAGCtggtgaggaagagagagaagaaagagaaaacactCTCAGTTCCTTCCCAAAGGCTCACCAGGGAGCATCTGATTCAGAGCAGTTTGAGAGTTGTTGTGAATCTGGGCAGAAATGGGCGTCTGAACATCAGCACTGTAACCACCTGCCTACTGTAACACAACACAACGCAATCTGTGGagtggtTCAGGAGCAGTGCTGTGTTGGAGCTCTAAGAGAGGGAAGGTGTTTATCTGGTATAAACGCGGCTAAAGctggagcagagtgtgaagaaaGCAGCGGCCCACTGTGTGGAGAGGATACGCAAAAGgagtGCTGCAGCTGCTGTGCGTTGGGTCTGCGTCTGAGGCGAGAGGGAAAAGGCTGTGATGTTCATCAACACCTGAGTTTTCCCTGCGGACACGTCTTCCTCACCTGCtgcgaggaggaagaggaaggagggGGGAGTGTACCTGTGCTCAGGAGGAAGGAGAAACCCAGACCTACTGCACTGCCCAAGAGAGTGTTGGAGAGTCAGTTTCCTAAGCAGTCGTTCTCTATGGAGGACCCGGAGCACACTGCTAACTCAGTGGAGAGGGTGGAGAAGGTGGAGCAGGTAGACAGGTGTCAGAGTTATGAGGGTCAGCTCTGCCATCACACCTGCATCAACACCCCCGACTCGTACAGGTGCACCTGCCGCCCGGGACACTCACTGCTGCAGGACGGACACACCTGTGCACCTGTTAtaaaattttttatattttgtcatttttttatgtgtgtgtttgcaggtaACAGCCTGTGCTCTCAGCAGTGCTCTGTGGTTCGAGGAAAAGCCCGGTGCTCCTGTTTCCCAGGATTCTCTCTGATGGCTGATGGGCAGAGCTGTGAAgATGTGGATGAGTGCAGGAATGCCTCACACACTTGCTCGagggaggaggtgtgtgtgaaCACGGAGGGTTCGCACAAGTGTGTGTCTCTAAACGAGCGATGCGACGTGGGGTTTATACACAACTACAATAGAGAGTGTGTGGATCTGAACGAGTGTgtgaccaacacacacacctgtctgGCGGGCGAGCGCTGTGTGAACACGGTGGGGGcgtatgtgtgtgagaggctgATTTCTTGTCCGAGTGGATACCAGCTGAGGAACGGAGTGTGTGAAGATATAGACGAGTGTGTGCTGAGGACTCATAACTGCGGTTCAGGACTGCAGTGCCAGAACACGCTGGGCTCCTTCCACTGCAGCTCCAAACAACAGCGCTGCCTCACCGGATTCACCCAGGATACTCACTCCAACTGCATCGatattgatgagtgcagtgtgttgtcgGATGCGTGTACTGCAGGGTTTAACTGTATAAACACAGTGGGGTCGTATACCTGCCAACGCAAGGTTGTAACCTGCAGCCGAGGATTTCACTCCAGCAACGACGGAACTCGCTGTGTGGacgtAGACGAGTGTGCGATGGGAACACACACCTGTGGGGAAGGACAGGTGTGTCACAACACGCCGGGCAGCTTCCGCTGCGACTGCCAGACCGGATACCAGTACGACTCGGCCCGGAGGACCTGCCTGGATATAAATGAATGCTGGCGTTTTCCGGGGCGGTTATGTGCTCAGTCATGTGAGAACACTCCAGGATCCTATCAGTGCTCCTGCACCTCCGGATTCTCCCTCGCATTCGACGGAAAGAACTGCGAAGATCTTAATGAATGTGACAATAACCCCTGCAGTCAAGAATGTGCCAATGTTTACGGATCCTATCAGTGCTACTGTCGCCTGGGTTACTACCTGAAAGAGGACGGACACACCTGTGAAGATATCGACGAATGTTCCCAGAGCATCGGAAACCTCTGCGCCTTCCAGTGCGTCAACGTCCAGGGCAGCTACCAGTGCGCCTGTCCCCCCGAGGGGTACTCCATGTCCCCCAACGGACGCACCTGTCGAGATATTGATGAGTGCGCCACTGGGGCTCACAACTGTTCAGCCACCCAAACCTGCTACAACATCCAGGGCAGTTTCCGCTGCCTGTCCTTTACATGCCCTGAAAACTACCGCAAAGTGACGGACACaCGCTGTGAACGTTCCAGTTGCCCCAACTTCCAGGACTGTCAGAACCTGCCTCTGAGAATCACCTACTACCAGCTGAGCTTCCAGACCAACATCGTGATTCCGGCGCAGATCTTCCGGATCGGTCCGTCTCCGGCGTACACCGGCGACAACATCCTGATCAGCATCCCGCGAGGAAACGAGGAGGGCTTCTTCAGCACCCGCCGCCTCAACAGCTTCACCGGGGCGGTGTACCTGCAGCGGCAGATCCCCGGCCCGCGGGACTTCCTCATTGACGTGGAGATGAAGCTCCTGCGGCAGGGAACCGTCACCAGCTTCATCGCTCGCATCTACGTCTTCATCACCTCTCACGCCGCGTAGAGACTGCTCTGAGATCAGTCAGGACCCACACTGATTTATACTGACTGTGGTTCTTAACTCTGATCATGGGGATCTGCTGCCCTGCACTGTTTCACTGTTTAATACCTCCTTTATAACTTCTTAAATTCAGAAAATACCGAAATATGATCCTTTAAAATCATCAAGAAGTTTTAGTAAAGATGACCAACAAATGCTTCtgaatatgcagctctggaaaaaaaaaaaagagatcacctaaaaatgatgagtttctttgattttaccaaattaaaaacc

Function

symbol description
fbln2 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within extracellular matrix organization. Predicted to be located in collagen-containing extracellular matrix and extracellular region. Is expressed in several structures, including cardiovascular system; hypochord; intestinal bulb; mesoderm; and tail bud. Orthologous to human FBLN2 (fibulin 2).

NR:

description
PREDICTED: fibulin-2-like isoform X1

GO: NA

KEGG:

id description
K17307 FBLN1_2; fibulin 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682836.1 True 4572 mRNA 0.50 16 16306852 16403416

Neighbor

gene id symbol gene type direction distance location
hdac11 hdac11,LOC107727860,LOC107749433 coding upstream 70516 16193143 ~ 16236336 (+)
LOC103030596 LOC108415872 coding upstream 462582 15838457 ~ 15844270 (+)
LOC107196954 NA coding upstream 496826 15802619 ~ 15810026 (+)
LOC103032686 pcbp2,LOC108440343,LOC106582661,LOC106956729,LOC103464415,LOC105030566,LOC106571954 coding upstream 506916 15785446 ~ 15799936 (+)
foxj3 foxj3,LOC107551120,LOC107749445 coding upstream 618131 15528310 ~ 15688721 (+)
LOC103035562 barx1,LOC106583841,LOC107576198,LOC107709546 coding downstream 201436 16604852 ~ 16610376 (+)
LOC103037415 alpl,LOC107691326,LOC107685635,LOC107749423 coding downstream 624832 17028248 ~ 17054064 (+)
c22h12orf10 LOC107570120 coding downstream 692650 17096066 ~ 17101615 (+)
LOC103032680 NA coding downstream 700697 17104113 ~ 17107100 (+)
LOC103038691 NA coding downstream 813360 17216776 ~ 17223278 (+)
G190155 NA non-coding upstream 61991 16239329 ~ 16244861 (+)
G190160 NA non-coding upstream 68965 16236469 ~ 16237887 (+)
G190156 NA non-coding upstream 94870 16210993 ~ 16211982 (+)
G190148 NA non-coding upstream 103095 16164321 ~ 16203757 (+)
G190147 NA non-coding upstream 115717 16163342 ~ 16191135 (+)
G190329 NA non-coding downstream 113345 16516761 ~ 16553210 (+)
G190339 NA non-coding downstream 161920 16565336 ~ 16565671 (+)
G190351 NA non-coding downstream 254805 16658221 ~ 16658493 (+)
G190353 NA non-coding downstream 282749 16686165 ~ 16686512 (+)
G190364 NA non-coding downstream 393438 16796854 ~ 16800333 (+)
G190109 acad9,LOC107551129,LOC107749438 other upstream 527016 15777805 ~ 15779836 (+)
map1lc3a map1lc3a,LOC107551126,LOC107685654 other upstream 549671 15710930 ~ 15757181 (+)
G190050 NA other upstream 941852 15362692 ~ 15365000 (+)
LOC103040222 ankrd52,LOC105017093,LOC106583345,LOC106565408 other upstream 1462576 14797668 ~ 14844276 (+)
slc6a1 slc6a1,slc6a1b,LOC107670967,LOC107746710,LOC107697564 other upstream 2135231 14114204 ~ 14171621 (+)
LOC111195387 cstf1,LOC107555629,LOC107749426,LOC107685639 other downstream 427493 16830909 ~ 16877838 (+)
G190481 strip1,LOC106583081 other downstream 716529 17119945 ~ 17123674 (+)
G190484 irf6,LOC106565674 other downstream 777706 17181122 ~ 17185128 (+)
cept1 cept1,LOC103025726,LOC108413012 other downstream 1030946 17434362 ~ 17446741 (+)
G190550 NA other downstream 1080404 17483820 ~ 17493182 (+)

Expression


Co-expression Network