CI01000013_11368665_11383592


Basic Information

Item Value
gene id CI01000013_11368665_11383592
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11368567 ~ 11383592 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_11368665_11383592.mRNA
GTCAGTATGTGGAGTTCTTCAGAGAGATTGGAGGAATTTCCTTCATCTACAACCTGTCAAAGTCCAGCACTTTCTCTCAGGTTAAAGAGACTGCTCTATTTACACTTGCATCCTTAGCTGAATTGCATGAGAGCTGTAAACAGACACTGTGCAAAGAGGAGACGTTTCGTGACTTAGCGCAGCATCTGGAACAGAAAATGCCACTTACGGAGAAAAGAGTAGCAGTGTACATGCTGTCTGTATTGGTTGCCAACAACAGATGTGGACAGACTCTTGCTAAGACCTCCAGGTGTATTGAAACCTTGCTTAGTTTGTTCAGGCAAAGTTTTCCGGATTCTAATGACTCTTATGAGCAGCTGCAGTTGTGGGCCACTGTGTCTAGTGCTCTCTGTGGCTCTGTCAACAATCCTCAGAATGAGGAGAATCAGAATGTATGTATGCGTGTGTTTCCCCTGGTGAAGACCTGGCTGCAGGAAGTGGCATTGCCCAGGGCAGAGCTGGCACAGCCAATATGCTCATTTATTGGCATGACTGTGGCAAATAACCCTTGTGCTCAGGAGTATTTTGTGTCAGTGGGAGGCCTTAATTCACTCTCAGACACTCTTACCAGAGTTTTGTCTCAGTCGGCACACAGTGCTGCTGCTTGTAAGATGGCTACGGTAATCACTAAAACACTGTCTGCCTGCATCTCCAGCAACGAGCAGTTGGTATCTTCTTTATCAGAGTTGAGGGTTATTCCAGGGCTGTTGTGTCTGTTGTCAAACCCAAACCTCGACCAACACGACAAGCTCGCAGTGGTATTGACTATTGGACACCTCACGGATGCCTGTGTAGAGCATCAATCTCAGTTGTTGTCAGCTGGAGGTTTGCCAGTTATGATTTCGCTGCTCACTGAGGCCAGTGATGAAGAGATCAGAAAGGCAGCTGTGTTTGTACTGCACACCTGCAAAAGAATCACTGAATCATTAGGTGCAGGCATGTCTAGTATGGATCTGCAGGATTGTGACTTAGAGAGACACCGGCAGTCAGCTGGAGAAATCCTCCAGAGAATACAGCATCTAGAGAAAAAGATGGGTGTGAAACTTTGGGAAAGAGATATTAAAAGCCAGCAGCGCAGCATGCAGAGGTCGGCCTCATCTGTGGAATGTAATGAGGCAATGTGGGAATGTTCTGTGATGCGAAAGGTCAAAGGTCATCATCGAGTATGTGAGGAGTTACACACAACTCCTGCAGGAACTCTAGAACATCCAATCACAAATGAAATACCGTACGACCAAGAGAGCTTGCAGTGTGTCAGCTCTGAAGAGTGTTTGAGTCCTGCCCAAGTCACTCACTTCGAACGCTCTAGCTGGGAAAAGGGCAAAGAAATAGAGCATGAACAAATGAGAGAGAATGAGAGGAATATTGAGAGGAGTGACAACCAAGAGAGAAGGAGAGAGAGAGATATTAAAAAGAGAGACATGGAGGTGAAATCTGAAAGAGTGGTGAAGAGATTAAAGACGATGAATCTAGACTCAGACATTAATGGCAACAAATGTCTCCAGCACTGCAGCATGCCAACAAGAGGCAGCAGAGATACACAGTGCCCAGATATTTTCAGACATCCTGATCCCATGAAGAGAAACCAGTGCGCACGCACTCTCTCAGATGATGAGATGTCTCTGTGCTCTGAGCTGTTAGACAGAGAAATTAACAGGTTTCTGAAGCCGCCCTCTCCCAATAAACCCAGCAATCTACGCTGTGCAGGTTGTGTGAAACATATGAATGAGATGGACAGTCGTTCATTTGGCGTCGTGTTGCGTAACTGCAGGTTTCAGTGTGACTTTCACCTGGTGCTACAAGAGGCTGAGGATCGATTCAAAAGAAGCCAGCAGTTAGAGAAGACTAGTCACACTTTAACACGTGCTCCCATCAACACACACAGCAAAATCAGAGAGCACAGCACACGCACTAATGAGGATAATAAGAGGAGCAAGAGGGAAAAACACAGACTGAGTCATCAACCATCAGACGGATGTGAGAGCCGGCGTCCACACAGTCTTCCACAATGTCTTTGGGATTGTGGAGGAATGTGCACCTACCTCAAATGTTTAGAAAGTTTTAGGCTCACACCTCTGAGAAGGCCTTGTGAAACATACAGTTTTAGCCTCACACCTCTGAGAAGGCCGTGTGAAACATACAGCAGACACAGAGATAGGCGGAACTGGTCTGCTGATGAGTTGTGCTACCTCAAAATGGGTATGAAAAGGTTTGGTCGGGCCTGGAACTCCATCCTCTGGACGTATCCCTTCCAGCCTGGACGCACCAATGTAGATCTGGCCAAGAAGTACCGACACATGCAGGCATGACATGACCAATAGTAAAGATCAGTTTTCTGAATACTGTAACATATTAATTTAACAAAGCCTGGCAAGAATGTTCAATTAATATTTTACTCCAAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_11368665_11383592.mRNA True 2446 mRNA 0.46 17 11368567 11383592

Neighbor

gene id symbol gene type direction distance location
CI01000013_11343431_11351259 NA coding downstream 16756 11342573 ~ 11351811 (-)
CI01000013_11308893_11311699 ARF4A, ARF5, ARF4 coding downstream 56868 11307795 ~ 11311699 (-)
CI01000013_11280259_11284882 NA coding downstream 83685 11280184 ~ 11284882 (-)
CI01000013_11276658_11278225 NA coding downstream 89837 11276634 ~ 11278730 (-)
CI01000013_11262983_11266454 RABL2B coding downstream 102113 11262475 ~ 11266454 (-)
CI01000013_11422924_11427360 SYT1 coding upstream 39127 11422719 ~ 11427360 (-)
CI01000013_11438137_11444770 NA coding upstream 54473 11438065 ~ 11445168 (-)
CI01000013_11453318_11457266 GLIPR1B coding upstream 69521 11453113 ~ 11458060 (-)
CI01000013_11468322_11475130 CERS3B coding upstream 84569 11468161 ~ 11475130 (-)
CI01000013_11480488_11512738 NA coding upstream 96896 11480488 ~ 11512738 (-)
G85557 NA non-coding downstream 54582 11313773 ~ 11313985 (-)
G85445 NA non-coding downstream 64983 11300622 ~ 11303584 (-)
G85444 NA non-coding downstream 75534 11291867 ~ 11293033 (-)
G85443 NA non-coding downstream 77381 11290293 ~ 11291186 (-)
G85446 NA non-coding downstream 78565 11287420 ~ 11290002 (-)
G85569 NA non-coding upstream 30051 11413643 ~ 11415350 (-)
G85570 NA non-coding upstream 33673 11417265 ~ 11421291 (-)
G85585 NA non-coding upstream 52270 11435862 ~ 11436153 (-)
G85620 NA non-coding upstream 181540 11565132 ~ 11565506 (-)
G85632 NA non-coding upstream 209709 11593301 ~ 11595301 (-)
G85401 NA other downstream 333101 11035032 ~ 11035466 (-)
G85188 NA other downstream 773230 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 796127 10563459 ~ 10569290 (-)
G85170 NA other downstream 887867 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 2045723 9307036 ~ 9336077 (-)
CI01000013_11596784_11604320 NA other upstream 215468 11596688 ~ 11604865 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012593 NA non-coding NC_007129.7 CM002902.2 7449248 ~ 7478152 (+)